cdocutils.nodes document q)q}q(U nametypesq}q(X%us 03. system architecture (proposed)qNX&us 02. value added services (proposed)qNX$us 01. core functionality (proposed)qNX,us 04. spread and impact of invasive speciesq NXinteropq Xlonicera japonicaq Xuser scenariosq NuUsubstitution_defsq }qUparse_messagesq]qUcurrent_sourceqNU decorationqNUautofootnote_startqKUnameidsq}q(hU"us-03-system-architecture-proposedqhU#us-02-value-added-services-proposedqhU!us-01-core-functionality-proposedqh U+us-04-spread-and-impact-of-invasive-speciesqh Uinteropqh Ulonicera-japonicaqh Uuser-scenariosquUchildrenq]qcdocutils.nodes section q)q }q!(U rawsourceq"UUparentq#hUsourceq$Xi/var/lib/jenkins/jobs/API_Documentation_trunk/workspace/api-documentation/source/design/userscenarios.txtq%Utagnameq&Usectionq'U attributesq(}q)(Udupnamesq*]Uclassesq+]Ubackrefsq,]Uidsq-]q.haUnamesq/]q0h auUlineq1KUdocumentq2hh]q3(cdocutils.nodes title q4)q5}q6(h"XUser Scenariosq7h#h h$h%h&Utitleq8h(}q9(h*]h+]h,]h-]h/]uh1Kh2hh]q:cdocutils.nodes Text q;XUser Scenariosq(h"h7h#h5ubaubcdocutils.nodes compound q?)q@}qA(h"Uh#h h$h%h&UcompoundqBh(}qC(h*]h+]qDUtoctree-wrapperqEah,]h-]h/]uh1Nh2hh]qFcsphinx.addnodes toctree qG)qH}qI(h"Uh#h@h$h%h&UtoctreeqJh(}qK(UnumberedqLKU includehiddenqMh#Xdesign/userscenariosqNUcaptionqONUglobqPh-]h,]U titlesonlyqQh*]h+]h/]UentriesqR]qSUhiddenqTU includefilesqU]qVUmaxdepthqWKuh1Kh]ubaubcdocutils.nodes paragraph qX)qY}qZ(h"XCThe user requirements outlined in this document drove much of the process for identification of the :doc:`DataONE Functional Use Cases` described elsewhere. The functional use cases were identified and prioritized over a series of meetings funded by the NSF sponsored "Virtual Data Center" (VDC) INTEROP_ project.h#h h$h%h&U paragraphq[h(}q\(h*]h+]h,]h-]h/]uh1Kh2hh]q](h;XdThe user requirements outlined in this document drove much of the process for identification of the q^q_}q`(h"XdThe user requirements outlined in this document drove much of the process for identification of the h#hYubcsphinx.addnodes pending_xref qa)qb}qc(h"X-:doc:`DataONE Functional Use Cases`qdh#hYh$h%h&U pending_xrefqeh(}qf(UreftypeXdocqgUrefwarnqhU reftargetqiXusecasesU refdomainUh-]h,]U refexplicith*]h+]h/]UrefdocqjhNuh1Kh]qkcdocutils.nodes inline ql)qm}qn(h"hdh(}qo(h*]h+]qp(Uxrefqqhgeh,]h-]h/]uh#hbh]qrh;XDataONE Functional Use Casesqsqt}qu(h"Uh#hmubah&Uinlineqvubaubh;X described elsewhere. The functional use cases were identified and prioritized over a series of meetings funded by the NSF sponsored "Virtual Data Center" (VDC) qwqx}qy(h"X described elsewhere. The functional use cases were identified and prioritized over a series of meetings funded by the NSF sponsored "Virtual Data Center" (VDC) h#hYubcdocutils.nodes reference qz)q{}q|(h"XINTEROP_Uresolvedq}Kh#hYh&U referenceq~h(}q(UnameXINTEROPUrefuriqX;http://nsf.gov/awardsearch/showAward.do?AwardNumber=0753138qh-]h,]h*]h+]h/]uh]qh;XINTEROPqq}q(h"Uh#h{ubaubh;X project.qq}q(h"X project.h#hYubeubh)q}q(h"Uh#h h$h%h&h'h(}q(h*]h+]h,]h-]qhah/]qhauh1Kh2hh]q(h4)q}q(h"X$US 01. Core Functionality (proposed)qh#hh$h%h&h8h(}q(h*]h+]h,]h-]h/]uh1Kh2hh]qh;X$US 01. Core Functionality (proposed)qq}q(h"hh#hubaubhX)q}q(h"XDataONE provides the distributed framework (which is comprised of Member and Coordinating Nodes as illustrated below), sound management, and robust technologies that enable long-term preservation of diverse multi-scale, multi-discipline, and multi-national observational data. DataONE initially emphasizes observational data collected by biological (genome to ecosystem) and environmental (atmospheric, ecological, hydrological, and oceanographic) scientists, research networks, and environmental observatories. DataONE will be domain agnostic, progressively expanding to broader domains and building on infrastructure and interoperability with DataNet partners.qh#hh$h%h&h[h(}q(h*]h+]h,]h-]h/]uh1Kh2hh]qh;XDataONE provides the distributed framework (which is comprised of Member and Coordinating Nodes as illustrated below), sound management, and robust technologies that enable long-term preservation of diverse multi-scale, multi-discipline, and multi-national observational data. DataONE initially emphasizes observational data collected by biological (genome to ecosystem) and environmental (atmospheric, ecological, hydrological, and oceanographic) scientists, research networks, and environmental observatories. DataONE will be domain agnostic, progressively expanding to broader domains and building on infrastructure and interoperability with DataNet partners.qq}q(h"hh#hubaubcdocutils.nodes figure q)q}q(h"Uh#hh$h%h&Ufigureqh(}q(h*]h-]qUid1qah,]UwidthqX7inh+]h/]uh1Kh2hh]q(cdocutils.nodes image q)q}q(h"X.. figure:: images/proposal_figure_1.png :figwidth: 7in DataONE Member Nodes form a robust, distributed network via coordinating services provided by a set of Coordinating Nodes (i.e., Oak Ridge Campus, UC-Santa Barbara, and University of New Mexico) arranged in a high-availability configuration. Scientists and citizens interact with Member Nodes (e.g., South African Environmental Observation Network, California Digital Library, USGS National Biological Information Infrastructure) through software tools that utilize standardized interfaces. This structure supports many different usage scenarios, such as data and metadata management and replication (e.g., using Morpho [black arrows] or the Mercury system [orange arrows]), as well as analysis and modeling (e.g., using commercial software like Matlab [light green arrows] and open-source scientific workflow systems like Kepler [blue arrows]). Coordinating Nodes perform many basic indexing and data replication services to ensure data availability and preservation (e.g., node registration [purple arrow] and monitoring via heartbeat services (red arrow]). h#hh$h%h&Uimageqh(}q(UuriX#design/images/proposal_figure_1.pngqh-]h,]h*]h+]U candidatesq}qU*hsh/]uh1Kh]ubcdocutils.nodes caption q)q}q(h"X#DataONE Member Nodes form a robust, distributed network via coordinating services provided by a set of Coordinating Nodes (i.e., Oak Ridge Campus, UC-Santa Barbara, and University of New Mexico) arranged in a high-availability configuration. Scientists and citizens interact with Member Nodes (e.g., South African Environmental Observation Network, California Digital Library, USGS National Biological Information Infrastructure) through software tools that utilize standardized interfaces. This structure supports many different usage scenarios, such as data and metadata management and replication (e.g., using Morpho [black arrows] or the Mercury system [orange arrows]), as well as analysis and modeling (e.g., using commercial software like Matlab [light green arrows] and open-source scientific workflow systems like Kepler [blue arrows]). Coordinating Nodes perform many basic indexing and data replication services to ensure data availability and preservation (e.g., node registration [purple arrow] and monitoring via heartbeat services (red arrow]).qh#hh$h%h&hOh(}q(h*]h+]h,]h-]h/]uh1Kh]qh;X#DataONE Member Nodes form a robust, distributed network via coordinating services provided by a set of Coordinating Nodes (i.e., Oak Ridge Campus, UC-Santa Barbara, and University of New Mexico) arranged in a high-availability configuration. Scientists and citizens interact with Member Nodes (e.g., South African Environmental Observation Network, California Digital Library, USGS National Biological Information Infrastructure) through software tools that utilize standardized interfaces. This structure supports many different usage scenarios, such as data and metadata management and replication (e.g., using Morpho [black arrows] or the Mercury system [orange arrows]), as well as analysis and modeling (e.g., using commercial software like Matlab [light green arrows] and open-source scientific workflow systems like Kepler [blue arrows]). Coordinating Nodes perform many basic indexing and data replication services to ensure data availability and preservation (e.g., node registration [purple arrow] and monitoring via heartbeat services (red arrow]).qq}q(h"hh#hubaubeubeubh)q}q(h"Uh#h h$h%h&h'h(}q(h*]h+]h,]h-]qhah/]qhauh1K2h2hh]q(h4)q}q(h"X&US 02. Value Added Services (proposed)qh#hh$h%h&h8h(}q(h*]h+]h,]h-]h/]uh1K2h2hh]qh;X&US 02. Value Added Services (proposed)qąq}q(h"hh#hubaubhX)q}q(h"XDataONE is not the end, but rather the means to enable scientists and citizens to address and better understand the difficult and complex biological, environmental, social, and technological challenges affecting human, ecosystem, and planetary sustainability. The comprehensive cyber-infrastructure allows novel questions to be asked that require harnessing the enormity of existing data and developing new methods to combine and analyze diverse data resources (see figure below).qh#hh$h%h&h[h(}q(h*]h+]h,]h-]h/]uh1K4h2hh]qh;XDataONE is not the end, but rather the means to enable scientists and citizens to address and better understand the difficult and complex biological, environmental, social, and technological challenges affecting human, ecosystem, and planetary sustainability. The comprehensive cyber-infrastructure allows novel questions to be asked that require harnessing the enormity of existing data and developing new methods to combine and analyze diverse data resources (see figure below).q̅q}q(h"hh#hubaubhX)q}q(h"XDataONE will accomplish its goals by making scientists, students, librarians, and citizens active participants in the data life cycle, especially the data preservation process. By supporting community derived interoperability standards and incorporating new value-added and innovative technologies (e.g., for semantic and geospatial information, scientific workflows, and advanced visualization) into the scientific process, DataONE will facilitate sophisticated data integration, analysis, interpretation, and understanding. A strong education and outreach program focuses on scientists and students learning to better and more easily manage, preserve, analyze, and visualize Earth observational data. Citizen scientists are actively engaged in data preservation and scientific discovery through their involvement in programs such as the USA National Phenology Network (USA-NPN) and numerous Cornell Laboratory of Ornithology citizen science efforts (e.g., eBird, Project FeederWatch).qh#hh$h%h&h[h(}q(h*]h+]h,]h-]h/]uh1K(h*]h+]h,]h-]r?hah/]r@h auh1K}h2hh]rA(h4)rB}rC(h"X,US 04. Spread and Impact of Invasive SpeciesrDh#j<h$h%h&h8h(}rE(h*]h+]h,]h-]h/]uh1K}h2hh]rFh;X,US 04. 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border and import controls struggle with sheer volume of material and confusion for access and collation of relevant biodiversity information h#jSh$h%h&j\h(}ru(h*]h+]h,]h-]h/]uh1Nh2hh]rvhX)rw}rx(h"XOverwhelming - border and import controls struggle with sheer volume of material and confusion for access and collation of relevant biodiversity informationryh#jsh$h%h&h[h(}rz(h*]h+]h,]h-]h/]uh1Kh]r{h;XOverwhelming - border and import controls struggle with sheer volume of material and confusion for access and collation of relevant biodiversity informationr|r}}r~(h"jyh#jwubaubaubeubhX)r}r(h"XThe outcome is suboptimal consideration of potential biotic risks associated with imports of new products, packing, shipping methods or products from new regions.rh#j<h$h%h&h[h(}r(h*]h+]h,]h-]h/]uh1Kh2hh]rh;XThe outcome is suboptimal consideration of potential biotic risks associated with imports of new products, packing, shipping methods or products from new regions.rr}r(h"jh#jubaubhX)r}r(h"XDataONE eliminates confusion related to information access and integration, providing domain relevant knowledge to researchers, border agents and to inform policy makers on potential impact or savings associated with new or ongoing trade relationships.rh#j<h$h%h&h[h(}r(h*]h+]h,]h-]h/]uh1Kh2hh]rh;XDataONE eliminates confusion related to information access and integration, providing domain relevant knowledge to researchers, border agents and to inform policy makers on potential impact or savings associated with new or ongoing trade relationships.rr}r(h"jh#jubaubh)r}r(h"Uh#j<h$h%h&hh(}r(h*]h+]h,]h-]rUid4rah/]uh1Kh2hh]r(h)r}r(h"X.. figure:: images/invasives.jpg :width: 50% Some examples of economically important invasive species in the United States. h#jh$h%h&hh(}r(h*]UuriXdesign/images/invasives.jpgrh-]h,]UwidthX50%h+]h}rU*jsh/]uh1Kh]ubh)r}r(h"XNSome examples of economically important invasive species in the United States.rh#jh$h%h&hOh(}r(h*]h+]h,]h-]h/]uh1Kh]rh;XNSome examples of economically important invasive species in the United States.rr}r(h"jh#jubaubeubhX)r}r(h"X Specifically, DataONE addresses:rh#j<h$h%h&h[h(}r(h*]h+]h,]h-]h/]uh1Kh2hh]rh;X Specifically, DataONE addresses:rr}r(h"jh#jubaubjR)r}r(h"Uh#j<h$h%h&jUh(}r(jWX-h-]h,]h*]h+]h/]uh1Kh2hh]r(jY)r}r(h"XyVolume – combines majority of digitized species occurrence information through GBIF,NBII, IABIN and other partnerships h#jh$h%h&j\h(}r(h*]h+]h,]h-]h/]uh1Nh2hh]rhX)r}r(h"XxVolume – combines majority of digitized species occurrence information through GBIF,NBII, IABIN and other partnershipsrh#jh$h%h&h[h(}r(h*]h+]h,]h-]h/]uh1Kh]rh;XxVolume – combines majority of digitized species occurrence information through GBIF,NBII, IABIN and other partnershipsrr}r(h"jh#jubaubaubjY)r}r(h"XStructure - efficient access to data, metadata, and workflows from ecological, environmental, socio-economic data, and related studies and assessments (e.g. Metacat, Dryad, Mercury, NBII) h#jh$h%h&j\h(}r(h*]h+]h,]h-]h/]uh1Nh2hh]rhX)r}r(h"XStructure - efficient access to data, metadata, and workflows from ecological, environmental, socio-economic data, and related studies and assessments (e.g. Metacat, Dryad, Mercury, NBII)rh#jh$h%h&h[h(}r(h*]h+]h,]h-]h/]uh1Kh]rh;XStructure - efficient access to data, metadata, and workflows from ecological, environmental, socio-economic data, and related studies and assessments (e.g. Metacat, Dryad, Mercury, NBII)rr}r(h"jh#jubaubaubjY)r}r(h"XDynamic - service infrastructure for interpolation of data (e.g. species occurrence points to distribution regions and environmental requirements) h#jh$h%h&j\h(}r(h*]h+]h,]h-]h/]uh1Nh2hh]rhX)r}r(h"XDynamic - service infrastructure for interpolation of data (e.g. species occurrence points to distribution regions and environmental requirements)rh#jh$h%h&h[h(}r(h*]h+]h,]h-]h/]uh1Kh]rh;XDynamic - 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