<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
    <modelVersion>4.0.0</modelVersion>
    <groupId>org.dataone</groupId>
    <artifactId>d1_annotator</artifactId>
    <packaging>war</packaging>
    <version>0.1-SNAPSHOT</version>
    <name>d1_annotator</name>
    <properties>
        <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
        <d1_libclient_version>2.3.0-SNAPSHOT</d1_libclient_version>
        <d1_portal_version>2.3.0-SNAPSHOT</d1_portal_version>
    </properties>
    <repositories>
        <repository>
			<id>dataone.org</id>
			<url>http://maven.dataone.org</url>
			<releases>
				<enabled>true</enabled>
			</releases>
			<snapshots>
				<enabled>true</enabled>
			</snapshots>
		</repository>
	</repositories>
    <dependencies>
        <dependency>
            <groupId>junit</groupId>
            <artifactId>junit</artifactId>
            <version>4.7</version>
            <scope>test</scope>
        </dependency>
        <dependency>
            <groupId>javax.servlet</groupId>
            <artifactId>servlet-api</artifactId>
            <version>2.5</version>
            <type>jar</type>
            <scope>provided</scope>
        </dependency>
        <dependency>
			<groupId>org.apache.commons</groupId>
			<artifactId>commons-csv</artifactId>
			<version>1.2</version>
		</dependency>
        <dependency>
            <groupId>commons-io</groupId>
            <artifactId>commons-io</artifactId>
            <version>2.4</version>
        </dependency>
        <dependency>
			<groupId>commons-logging</groupId>
			<artifactId>commons-logging</artifactId>
			<version>1.2</version>
		</dependency>
		<dependency>
			<groupId>org.apache.httpcomponents</groupId>
			<artifactId>httpclient</artifactId>
			<version>4.3.3</version>
		</dependency>
		<dependency>
			<groupId>xalan</groupId>
			<artifactId>xalan</artifactId>
			<version>2.7.1</version>
			<exclusions>
				<exclusion>
				    <groupId>xml-apis</groupId>
				    <artifactId>xml-apis</artifactId>
				</exclusion>
			</exclusions>
		</dependency>
		
        <dependency>
			<groupId>org.apache.jena</groupId>
			<artifactId>jena-tdb</artifactId>
			<version>1.0.0</version>
		</dependency>
		
		<dependency>
			<groupId>net.minidev</groupId>
			<artifactId>json-smart</artifactId>
			<version>1.1.1</version>
		</dependency>
		
		<dependency>
			<groupId>org.springframework</groupId>
			<artifactId>spring-core</artifactId>
			<version>3.1.4.RELEASE</version>
		</dependency>
		
		<dependency>
			<groupId>org.springframework</groupId>
			<artifactId>spring-test</artifactId>
			<version>3.1.4.RELEASE</version>
		</dependency>
		
		<!-- EML Datamanager dependencies -->
		<dependency>
			<groupId>org.ecoinformatics.eml</groupId>
			<artifactId>datamanager</artifactId>
			<version>0.9.1-SNAPSHOT</version>
		</dependency>

		<!-- json dependencies -->
		<dependency>
			<groupId>org.json</groupId>
			<artifactId>json</artifactId>
			<version>20090211</version>
		</dependency>

		<!-- httpclient dependencies -->
		<dependency>
			<groupId>org.apache.httpcomponents</groupId>
			<artifactId>httpclient</artifactId>
			<version>4.4</version>
		</dependency>

		<!-- linkipedia dependencies -->
		<!--  
		<dependency>
			<groupId>edu.rpi.tw.linkipedia</groupId>
			<artifactId>linkipedia</artifactId>
			<version>1.0</version>
		</dependency>
		-->
		<!-- annotator dependencies -->
		<!--
		<dependency>
			<groupId>org.apache.uima</groupId>
			<artifactId>Tagger</artifactId>
			<version>2.3.1</version>
		</dependency>

		<dependency>
			<groupId>org.apache.uima</groupId>
			<artifactId>WhitespaceTokenizer</artifactId>
			<version>2.3.1</version>
		</dependency>

		<dependency>
			<groupId>org.apache.ant</groupId>
			<artifactId>ant</artifactId>
			<version>1.8.2</version>
		</dependency>

		<dependency>
			<groupId>org.antlr</groupId>
			<artifactId>antlr-runtime</artifactId>
			<version>3.5</version>
		</dependency>

		<dependency>
			<groupId>com.hp.hpl.jena</groupId>
			<artifactId>arq</artifactId>
			<version>2.8.7</version>
		</dependency>

		<dependency>
			<groupId>org.ow2.asm</groupId>
			<artifactId>asm</artifactId>
			<version>4.1</version>
		</dependency>

		<dependency>
			<groupId>org.ow2.asm</groupId>
			<artifactId>asm-commons</artifactId>
			<version>4.1</version>
		</dependency>

		<dependency>
			<groupId>commons-codec</groupId>
			<artifactId>commons-codec</artifactId>
			<version>1.7</version>
		</dependency>

		<dependency>
			<groupId>org.apache.commons</groupId>
			<artifactId>commons-compress</artifactId>
			<version>1.7</version>
		</dependency>

		<dependency>
			<groupId>commons-logging</groupId>
			<artifactId>commons-logging</artifactId>
			<version>1.1.1</version>
		</dependency>

		<dependency>
			<groupId>org.apache.commons</groupId>
			<artifactId>commons-math</artifactId>
			<version>2.2</version>
		</dependency>

		<dependency>
			<groupId>com.googlecode.efficient-java-matrix-library</groupId>
			<artifactId>ejml</artifactId>
			<version>0.23</version>
		</dependency>

		<dependency>
			<groupId>org.apache.httpcomponents</groupId>
			<artifactId>httpclient</artifactId>
			<version>4.3.1</version>
		</dependency>

		<dependency>
			<groupId>org.apache.httpcomponents</groupId>
			<artifactId>httpcore</artifactId>
			<version>4.3</version>
		</dependency>

		<dependency>
			<groupId>com.ibm.icu</groupId>
			<artifactId>icu4j</artifactId>
			<version>3.4.4</version>
		</dependency>

		<dependency>
			<groupId>com.ibm.icu</groupId>
			<artifactId>icu4j</artifactId>
			<version>52.1</version>
		</dependency>

		<dependency>
			<groupId>com.hp.hpl.jena</groupId>
			<artifactId>iri</artifactId>
			<version>0.8</version>
		</dependency>

		<dependency>
			<groupId>jakarta-regexp</groupId>
			<artifactId>jakarta-regexp</artifactId>
			<version>1.4</version>
		</dependency>

		<dependency>
			<groupId>com.hp.hpl.jena</groupId>
			<artifactId>jena</artifactId>
			<version>2.6.4</version>
		</dependency>

		<dependency>
			<groupId>org.eclipse.jetty.aggregate</groupId>
			<artifactId>jetty-all</artifactId>
			<version>7.1.4.v20100610</version>
		</dependency>

		<dependency>
			<groupId>joda-time</groupId>
			<artifactId>joda-time</artifactId>
			<version>2.1</version>
		</dependency>

		<dependency>
			<groupId>de.jollyday</groupId>
			<artifactId>jollyday</artifactId>
			<version>0.4.7</version>
		</dependency>

		<dependency>
			<groupId>junit</groupId>
			<artifactId>junit</artifactId>
			<version>4.10</version>
		</dependency>

		<dependency>
			<groupId>com.carrotsearch.randomizedtesting</groupId>
			<artifactId>junit4-ant</artifactId>
			<version>2.0.13</version>
		</dependency>

		<dependency>
			<groupId>com.carrotsearch.randomizedtesting</groupId>
			<artifactId>junit4-ant</artifactId>
			<version>2.0.13</version>
		</dependency>

		<dependency>
			<groupId>log4j</groupId>
			<artifactId>log4j</artifactId>
			<version>1.2.13</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-analyzers-common</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-analyzers-kuromoji</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-analyzers-morfologik</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-analyzers-phonetic</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-analyzers-smartcn</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-analyzers-stempel</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-analyzers-uima</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-benchmark</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-classification</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-codecs</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-demo</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-expressions</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-facet</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-grouping</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-highlighter</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-join</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-memory</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-misc</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-queries</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-queryparser</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-replicator</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-sandbox</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-spatial</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-suggest</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.apache.lucene</groupId>
			<artifactId>lucene-test-framework</artifactId>
			<version>4.7.0</version>
		</dependency>

		<dependency>
			<groupId>org.carrot2</groupId>
			<artifactId>morfologik-fsa</artifactId>
			<version>1.7.1</version>
		</dependency>

		<dependency>
			<groupId>org.carrot2</groupId>
			<artifactId>morfologik-polish</artifactId>
			<version>1.7.1</version>
		</dependency>

		<dependency>
			<groupId>org.carrot2</groupId>
			<artifactId>morfologik-stemming</artifactId>
			<version>1.7.1</version>
		</dependency>

		<dependency>
			<groupId>net.sourceforge.nekohtml</groupId>
			<artifactId>nekohtml</artifactId>
			<version>1.9.17</version>
		</dependency>

		<dependency>
			<groupId>com.carrotsearch.randomizedtesting</groupId>
			<artifactId>randomizedtesting-runner</artifactId>
			<version>2.0.13</version>
		</dependency>

		<dependency>
			<groupId>javax.servlet</groupId>
			<artifactId>servlet-api</artifactId>
			<version>2.5</version>
		</dependency>

		<dependency>
			<groupId>org.slf4j</groupId>
			<artifactId>slf4j-api</artifactId>
			<version>1.5.8</version>
		</dependency>

		<dependency>
			<groupId>org.slf4j</groupId>
			<artifactId>slf4j-log4j12</artifactId>
			<version>1.5.8</version>
		</dependency>


		<dependency>
			<groupId>com.spatial4j</groupId>
			<artifactId>spatial4j</artifactId>
			<version>0.4.1</version>
		</dependency>

		<dependency>
			<groupId>edu.stanford.nlp</groupId>
			<artifactId>stanford-corenlp</artifactId>
			<version>3.3.1</version>
		</dependency>

		<dependency>
			<groupId>stax</groupId>
			<artifactId>stax-api</artifactId>
			<version>1.0.1</version>
		</dependency>

		<dependency>
			<groupId>org.apache.uima</groupId>
			<artifactId>uimaj-core</artifactId>
			<version>2.3.1</version>
		</dependency>

		<dependency>
			<groupId>org.codehaus.woodstox</groupId>
			<artifactId>wstx-asl</artifactId>
			<version>3.2.9</version>
		</dependency>

		<dependency>
			<groupId>xerces</groupId>
			<artifactId>xercesImpl</artifactId>
			<version>2.7.1</version>
		</dependency>

		<dependency>
			<groupId>xerces</groupId>
			<artifactId>xercesImpl</artifactId>
			<version>2.9.1</version>
		</dependency>

		<dependency>
			<groupId>com.io7m.xom</groupId>
			<artifactId>xom</artifactId>
			<version>1.2.10</version>
		</dependency>
		-->
		
		<!-- DataONE dependencies -->
		<dependency>
			<groupId>org.dataone</groupId>
			<artifactId>d1_portal</artifactId>
			<version>${d1_portal_version}</version>
			<!-- exclude extraneous artifacts (jars) -->
			<exclusions>
		        <exclusion>
		          <groupId>org.jibx</groupId>
		          <artifactId>jibx-tools</artifactId>
		        </exclusion>
		        <exclusion>
		          <groupId>org.jibx</groupId>
		          <artifactId>jibx-schema</artifactId>
		        </exclusion>
		        <exclusion>
		          <groupId>org.jibx</groupId>
		          <artifactId>jibx-extras</artifactId>
		        </exclusion>
		        <exclusion>
		          <groupId>org.jibx</groupId>
		          <artifactId>jibx-bind</artifactId>
		        </exclusion>
		        <exclusion>
		        	<groupId>org.apache.maven.plugins</groupId>
					<artifactId>maven-compiler-plugin</artifactId>
		        </exclusion>
		        <exclusion>
		        	<groupId>org.apache.maven.plugins</groupId>
					<artifactId>maven-jar-plugin</artifactId>
		        </exclusion>
		        <exclusion>
		        	<groupId>org.apache.maven.plugins</groupId>
					<artifactId>maven-clean-plugin</artifactId>
		        </exclusion>
		        <exclusion>
		        	<groupId>org.jibx</groupId>
					<artifactId>maven-jibx-plugin</artifactId>
		        </exclusion>
		        <!-- TODO: refine the JCS requirements -->
		        <exclusion>
		        	<groupId>berkeleydb</groupId>
      				<artifactId>berkeleydb</artifactId>
		        </exclusion>
		        <exclusion>
		        	<groupId>mysql</groupId>
      				<artifactId>mysql-connector-java</artifactId>
		        </exclusion>
		        <exclusion>
		        	<groupId>hsqldb</groupId>
					<artifactId>hsqldb</artifactId>
		        </exclusion>
		        <exclusion>
					<groupId>xml-apis</groupId>
					<artifactId>xml-apis</artifactId>
		        </exclusion>
		        <exclusion>
		        	<groupId>junit</groupId>
					<artifactId>junit</artifactId>
		        </exclusion>
		        <exclusion>
					<groupId>xerces</groupId>
					<artifactId>xercesImpl</artifactId>
		        </exclusion>
		        <exclusion>
					<groupId>com.hp.hpl.jena</groupId>
					<artifactId>jena</artifactId>
				</exclusion>
			</exclusions>
		</dependency>
		
    </dependencies>
	<build>
		<!--  <finalName>d1_annotator</finalName>-->
		
		<plugins>
			<plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-compiler-plugin</artifactId>
                <configuration>
                    <source>1.7</source>
                    <target>1.7</target>
                </configuration>
            </plugin>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-jar-plugin</artifactId>
				<executions>
					<execution>
						<id>make-a-jar</id>
						<phase>compile</phase>
						<goals>
							<goal>jar</goal>
						</goals>
					</execution>
				</executions>
			</plugin>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-install-plugin</artifactId>
				<executions>
					<execution>
						<phase>install</phase>
						<goals>
							<goal>install-file</goal>
						</goals>
						<configuration>
							<packaging>jar</packaging>
							<artifactId>${project.artifactId}</artifactId>
							<groupId>${project.groupId}</groupId>
							<version>${project.version}</version>
							<file>
								${project.build.directory}/${project.artifactId}-${project.version}.jar
							</file>
						</configuration>
					</execution>
				</executions>
			</plugin>
		</plugins>
		
	</build>
</project>