Started by user administrator Running as SYSTEM Building in workspace /var/lib/jenkins/jobs/metacat_beta/workspace No credentials specified Wiping out workspace first. Cloning the remote Git repository Cloning repository https://github.com/NCEAS/metacat > git init /var/lib/jenkins/jobs/metacat_beta/workspace/metacat # timeout=10 Fetching upstream changes from https://github.com/NCEAS/metacat > git --version # timeout=10 > git fetch --tags --progress https://github.com/NCEAS/metacat +refs/heads/*:refs/remotes/origin/* > git config remote.origin.url https://github.com/NCEAS/metacat # timeout=10 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10 > git config remote.origin.url https://github.com/NCEAS/metacat # timeout=10 Fetching upstream changes from https://github.com/NCEAS/metacat > git fetch --tags --progress https://github.com/NCEAS/metacat +refs/heads/*:refs/remotes/origin/* > git rev-parse origin/master^{commit} # timeout=10 Checking out Revision ed88d8cc5562695b24ac5ee23057bec054d67621 (origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f ed88d8cc5562695b24ac5ee23057bec054d67621 Commit message: "Merge pull request #1433 from NCEAS/dev-2.12" > git rev-list --no-walk cbab9d6189b18f29b59e38ba669eb81f6c20bacd # timeout=10 [metacat] $ ant -file build.xml fullclean Buildfile: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build.xml setMavenHome: [exec] Result: 1 [echo] Setting Maven home (maven.home) to '/usr/share/maven'. setTomcatCommon: setTomcatNoCommon: config: [echo] *********** set jsdk to /usr/share/tomcat8/lib/servlet-api.jar build-metacat-common: [artifact:mvn] [INFO] Scanning for projects... [artifact:mvn] [INFO] [artifact:mvn] [INFO] ------------< edu.ucsb.nceas.metacat.common:metacat-common >------------ [artifact:mvn] [INFO] Building metacat-common 2.12.4 [artifact:mvn] [INFO] --------------------------------[ jar ]--------------------------------- [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ metacat-common --- [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] BUILD SUCCESS [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Total time: 0.221 s [artifact:mvn] [INFO] Finished at: 2020-03-13T21:02:23Z [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Scanning for projects... [artifact:mvn] [INFO] [artifact:mvn] [INFO] ------------< edu.ucsb.nceas.metacat.common:metacat-common >------------ [artifact:mvn] [INFO] Building metacat-common 2.12.4 [artifact:mvn] [INFO] --------------------------------[ jar ]--------------------------------- [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:copy-resources (copy-resources) @ metacat-common --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 11 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ metacat-common --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 0 resource [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-compiler-plugin:2.3:compile (default-compile) @ metacat-common --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [INFO] Compiling 14 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/classes [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ metacat-common --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 2 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-compiler-plugin:2.3:testCompile (default-testCompile) @ metacat-common --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [INFO] Compiling 7 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/test-classes [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ metacat-common --- [artifact:mvn] [INFO] Surefire report directory: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/surefire-reports [artifact:mvn] [artifact:mvn] ------------------------------------------------------- [artifact:mvn] T E S T S [artifact:mvn] ------------------------------------------------------- [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.SolrQueryServiceControllerTest [artifact:mvn] log4j:WARN No appenders could be found for logger (org.dataone.configuration.Settings). [artifact:mvn] log4j:WARN Please initialize the log4j system properly. [artifact:mvn] log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info. [artifact:mvn] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.301 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.SolrQueryResponseWriterFactoryTest [artifact:mvn] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.EnabledQueryEnginesTest [artifact:mvn] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.SolrQueryResponseTransformerTest [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.resourcemap.ResourceMapNamespacesTest [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.SolrServerFactoryTest [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec [artifact:mvn] [artifact:mvn] Results : [artifact:mvn] [artifact:mvn] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0 [artifact:mvn] [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ metacat-common --- [artifact:mvn] [INFO] Building jar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/metacat-common-2.12.4.jar [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-install-plugin:2.4:install (default-install) @ metacat-common --- [artifact:mvn] [INFO] Installing /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/metacat-common-2.12.4.jar to /var/lib/jenkins/.m2/repository/edu/ucsb/nceas/metacat/common/metacat-common/2.12.4/metacat-common-2.12.4.jar [artifact:mvn] [INFO] Installing /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/pom.xml to /var/lib/jenkins/.m2/repository/edu/ucsb/nceas/metacat/common/metacat-common/2.12.4/metacat-common-2.12.4.pom [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] BUILD SUCCESS [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Total time: 4.409 s [artifact:mvn] [INFO] Finished at: 2020-03-13T21:02:28Z [artifact:mvn] [INFO] ------------------------------------------------------------------------ init: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/maven Trying to override old definition of task antlib:org.apache.maven.artifact.ant:dependencies Trying to override old definition of task antlib:org.apache.maven.artifact.ant:install Trying to override old definition of task antlib:org.apache.maven.artifact.ant:deploy Trying to override old definition of task antlib:org.apache.maven.artifact.ant:install-provider Trying to override old definition of task antlib:org.apache.maven.artifact.ant:mvn Trying to override old definition of task antlib:org.apache.maven.artifact.ant:writepom Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:localRepository Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:remoteRepository Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:authentication Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:proxy Trying to override old definition of task antlib:org.apache.maven.artifact.ant:pom [echo] getting to resolve maven dependencies [echo] done with pom [artifact:dependencies] [WARNING] POM for 'org.ecoinformatics.eml:datamanager:pom:1.0.0:compile' is invalid. [artifact:dependencies] [artifact:dependencies] Its dependencies (if any) will NOT be available to the current build. [artifact:dependencies] [INFO] snapshot com.googlecode.foresite-toolkit:foresite:1.0-SNAPSHOT: checking for updates from opengeo [artifact:dependencies] [INFO] snapshot com.googlecode.foresite-toolkit:foresite:1.0-SNAPSHOT: checking for updates from sonatype.org [artifact:dependencies] [INFO] snapshot com.googlecode.foresite-toolkit:foresite:1.0-SNAPSHOT: checking for updates from Jibx Maven Repository [artifact:dependencies] [INFO] snapshot com.googlecode.foresite-toolkit:foresite:1.0-SNAPSHOT: checking for updates from maven2-repository.dev.java.net [artifact:dependencies] [WARNING] *** CHECKSUM FAILED - Invalid checksum file - RETRYING [artifact:dependencies] [WARNING] *** CHECKSUM FAILED - Invalid checksum file - IGNORING [echo] done with filesetId [artifact:dependencies] [WARNING] POM for 'org.ecoinformatics.eml:datamanager:pom:1.0.0:compile' is invalid. [artifact:dependencies] [artifact:dependencies] Its dependencies (if any) will NOT be available to the current build. [echo] done with resolving maven dependencies clean: fullclean: BUILD SUCCESSFUL Total time: 9 seconds [workspace] $ /bin/sh -xe /tmp/jenkins1917066015264344643.sh [workspace] $ /bin/sh -xe /tmp/jenkins8839090929543105008.sh + cd /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat + export PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/usr/local/bin + make clean html rm -rf ../../../build/docs/* `which sphinx-build` -b html -d ../../../build/docs/doctrees source ../../../build/docs Running Sphinx v1.3.2 making output directory... loading pickled environment... not yet created building [mo]: targets for 0 po files that are out of date building [html]: targets for 24 source files that are out of date updating environment: 24 added, 0 changed, 0 removed reading sources... [ 4%] authinterface reading sources... [ 8%] configuration reading sources... [ 12%] contributors reading sources... [ 16%] dataone reading sources... [ 20%] development reading sources... [ 25%] doi reading sources... [ 29%] event-logging reading sources... [ 33%] geoserver reading sources... [ 37%] harvester reading sources... [ 41%] identifiers reading sources... [ 45%] index reading sources... [ 50%] install reading sources... [ 54%] intro reading sources... [ 58%] license reading sources... [ 62%] metacat-properties reading sources... [ 66%] oaipmh reading sources... [ 70%] ore-model-expansion reading sources... [ 75%] query-index reading sources... [ 79%] readonly reading sources... [ 83%] replication reading sources... [ 87%] sitemaps reading sources... [ 91%] statistics-service reading sources... [ 95%] submitting reading sources... [100%] themes /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/install.rst:84: WARNING: Title underline too short. Download the Metacat Installer (Highly Recommended) .............................. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/install.rst:133: WARNING: Title underline too short. Check Out Metacat Source Code from GitHub (for Developers) ....................................................... /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/install.rst:133: WARNING: Title underline too short. Check Out Metacat Source Code from GitHub (for Developers) ....................................................... /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/metacat-properties.rst:519: WARNING: Block quote ends without a blank line; unexpected unindent. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/ore-model-expansion.rst:200: WARNING: Literal block expected; none found. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/ore-model-expansion.rst:233: WARNING: Literal block expected; none found. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/readonly.rst:44: WARNING: Bullet list ends without a blank line; unexpected unindent. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/readonly.rst:45: WARNING: Line block ends without a blank line. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/readonly.rst:55: WARNING: Bullet list ends without a blank line; unexpected unindent. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/readonly.rst:56: WARNING: Line block ends without a blank line. /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/sitemaps.rst:69: WARNING: Title underline too short. Serving Your Sitemaps ------------------ /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/sitemaps.rst:69: WARNING: Title underline too short. Serving Your Sitemaps ------------------ /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/themes.rst:69: WARNING: Enumerated list ends without a blank line; unexpected unindent. looking for now-outdated files... none found pickling environment... done checking consistency... /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/readonly.rst:: WARNING: document isn't included in any toctree done preparing documents... done writing output... [ 4%] authinterface writing output... [ 8%] configuration writing output... [ 12%] contributors writing output... [ 16%] dataone writing output... [ 20%] development writing output... [ 25%] doi writing output... [ 29%] event-logging writing output... [ 33%] geoserver writing output... [ 37%] harvester writing output... [ 41%] identifiers writing output... [ 45%] index writing output... [ 50%] install writing output... [ 54%] intro writing output... [ 58%] license writing output... [ 62%] metacat-properties writing output... [ 66%] oaipmh writing output... [ 70%] ore-model-expansion writing output... [ 75%] query-index writing output... [ 79%] readonly writing output... [ 83%] replication writing output... [ 87%] sitemaps writing output... [ 91%] statistics-service writing output... [ 95%] submitting writing output... [100%] themes generating indices... genindex writing additional pages... search copying images... [ 2%] images/screenshots/image035.jpg copying images... [ 4%] images/guid_insert.png copying images... [ 6%] images/screenshots/image031.png copying images... [ 8%] images/identifiers.png copying images... [ 10%] images/screenshots/image015.png copying images... [ 12%] images/screenshots/image049.png copying images... [ 14%] images/screenshots/image011.png copying images... 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[ 51%] images/screenshots/image058.png copying images... [ 53%] images/derived-data-smith-package.png copying images... [ 55%] images/screenshots/image070.png copying images... [ 57%] images/screenshots/image045.jpg copying images... [ 59%] images/stats-query-sequence-diagram.png copying images... [ 61%] images/Derived-data-example.png copying images... [ 63%] images/screenshots/image037.jpg copying images... [ 65%] images/screenshots/image043.jpg copying images... [ 67%] images/indexing-class-diagram.png copying images... [ 69%] images/screenshots/image068.png copying images... [ 71%] images/screenshots/image072.png copying images... [ 73%] images/screenshots/image065.jpg copying images... [ 75%] images/screenshots/image033.jpg copying images... [ 77%] themes/metacatui/static/metacat-logo-darkgray.png copying images... [ 79%] images/screenshots/image051.jpg copying images... [ 81%] images/screenshots/image041.jpg copying images... 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[metacat] $ ant -file build.xml -Dbuild.tomcat.dir=/usr/share/tomcat7 -Dmetacat.dir=/var/lib/jenkins/jobs/metacat_beta/workspace/metacat javadoc fulldist Buildfile: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build.xml setMavenHome: [exec] Result: 1 [echo] Setting Maven home (maven.home) to '/usr/share/maven'. setTomcatCommon: setTomcatNoCommon: config: [echo] *********** set jsdk to /usr/share/tomcat7/lib/servlet-api.jar build-metacat-common: [artifact:mvn] [INFO] Scanning for projects... [artifact:mvn] [INFO] [artifact:mvn] [INFO] ------------< edu.ucsb.nceas.metacat.common:metacat-common >------------ [artifact:mvn] [INFO] Building metacat-common 2.12.4 [artifact:mvn] [INFO] --------------------------------[ jar ]--------------------------------- [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ metacat-common --- [artifact:mvn] [INFO] Deleting /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] BUILD SUCCESS [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Total time: 0.226 s [artifact:mvn] [INFO] Finished at: 2020-03-13T21:02:38Z [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Scanning for projects... [artifact:mvn] [INFO] [artifact:mvn] [INFO] ------------< edu.ucsb.nceas.metacat.common:metacat-common >------------ [artifact:mvn] [INFO] Building metacat-common 2.12.4 [artifact:mvn] [INFO] --------------------------------[ jar ]--------------------------------- [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:copy-resources (copy-resources) @ metacat-common --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 11 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ metacat-common --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 0 resource [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-compiler-plugin:2.3:compile (default-compile) @ metacat-common --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [INFO] Compiling 14 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/classes [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ metacat-common --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 2 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-compiler-plugin:2.3:testCompile (default-testCompile) @ metacat-common --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [INFO] Compiling 7 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/test-classes [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ metacat-common --- [artifact:mvn] [INFO] Surefire report directory: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/surefire-reports [artifact:mvn] [artifact:mvn] ------------------------------------------------------- [artifact:mvn] T E S T S [artifact:mvn] ------------------------------------------------------- [artifact:mvn] log4j:WARN No appenders could be found for logger (org.dataone.configuration.Settings). [artifact:mvn] log4j:WARN Please initialize the log4j system properly. [artifact:mvn] log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info. [artifact:mvn] Running edu.ucsb.nceas.metacat.common.SolrServerFactoryTest [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.857 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.EnabledQueryEnginesTest [artifact:mvn] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.SolrQueryResponseTransformerTest [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.SolrQueryServiceControllerTest [artifact:mvn] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.104 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.query.SolrQueryResponseWriterFactoryTest [artifact:mvn] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.common.resourcemap.ResourceMapNamespacesTest [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec [artifact:mvn] [artifact:mvn] Results : [artifact:mvn] [artifact:mvn] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0 [artifact:mvn] [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ metacat-common --- [artifact:mvn] [INFO] Building jar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/metacat-common-2.12.4.jar [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-install-plugin:2.4:install (default-install) @ metacat-common --- [artifact:mvn] [INFO] Installing /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/target/metacat-common-2.12.4.jar to /var/lib/jenkins/.m2/repository/edu/ucsb/nceas/metacat/common/metacat-common/2.12.4/metacat-common-2.12.4.jar [artifact:mvn] [INFO] Installing /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-common/pom.xml to /var/lib/jenkins/.m2/repository/edu/ucsb/nceas/metacat/common/metacat-common/2.12.4/metacat-common-2.12.4.pom [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] BUILD SUCCESS [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Total time: 3.075 s [artifact:mvn] [INFO] Finished at: 2020-03-13T21:02:42Z [artifact:mvn] [INFO] ------------------------------------------------------------------------ init: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/maven Trying to override old definition of task antlib:org.apache.maven.artifact.ant:dependencies Trying to override old definition of task antlib:org.apache.maven.artifact.ant:install Trying to override old definition of task antlib:org.apache.maven.artifact.ant:deploy Trying to override old definition of task antlib:org.apache.maven.artifact.ant:install-provider Trying to override old definition of task antlib:org.apache.maven.artifact.ant:mvn Trying to override old definition of task antlib:org.apache.maven.artifact.ant:writepom Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:localRepository Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:remoteRepository Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:authentication Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:proxy Trying to override old definition of task antlib:org.apache.maven.artifact.ant:pom [echo] getting to resolve maven dependencies [echo] done with pom [artifact:dependencies] [WARNING] POM for 'org.ecoinformatics.eml:datamanager:pom:1.0.0:compile' is invalid. [artifact:dependencies] [artifact:dependencies] Its dependencies (if any) will NOT be available to the current build. [echo] done with filesetId [artifact:dependencies] [WARNING] POM for 'org.ecoinformatics.eml:datamanager:pom:1.0.0:compile' is invalid. [artifact:dependencies] [artifact:dependencies] Its dependencies (if any) will NOT be available to the current build. [echo] done with resolving maven dependencies resolveDependencies: [echo] Moving Maven dependencies (${dependency.fileset}) to lib/maven [delete] Deleting directory /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/maven [copy] Copying 131 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/maven prepare: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/classes [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/docs/api [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/tmp [copy] Copying 505 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src javadoc: [javadoc] Generating Javadoc [javadoc] Javadoc execution [javadoc] Loading source files for package edu.ucsb.nceas.dbadapter... [javadoc] Loading source files for package edu.ucsb.nceas.metacat... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.accesscontrol... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin.upgrade... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin.upgrade.dataone... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin.upgrade.solr... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.advancedsearch... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.annotation... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.authentication... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.cart... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.client... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.client.rest... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.clientview... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.database... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.convert... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.hazelcast... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.resourcemap... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.v1... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataquery... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.doi.datacite... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.event... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.harvesterClient... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.index... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.lsid... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.harvester... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.provider.server... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.provider.server.catalog... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.provider.server.crosswalk... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.plugin... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.properties... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.replication... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.restservice... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.restservice.v1... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.restservice.v2... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.scheduler... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.service... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.shared... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.spatial... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.util... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.workflow... [javadoc] Loading source files for package edu.ucsb.nceas.protocols.metacat... [javadoc] Loading source files for package edu.ucsb.nceas.shared.xsd... [javadoc] Constructing Javadoc information... [javadoc] Standard Doclet version 1.8.0_242 [javadoc] Building tree for all the packages and classes... [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/AbstractDatabase.java:158: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "58" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "45" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "45" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "45" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see: reference not found: http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AccessionNumber.java:76: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AssociateAccessPolicy.java:139: warning - @param argument "parserName" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:60: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:99: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:99: warning - @param argument "user" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:110: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:110: warning - @param argument "authuser" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:129: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:533: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:637: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:737: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:801: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:816: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:1059: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:1075: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthSession.java:205: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:70: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:81: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:98: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:117: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:133: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:146: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:165: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:177: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:97: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:114: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:131: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:150: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:166: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:179: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:205: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:217: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/CommentNode.java:45: warning - @param argument "nodetype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:477: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:496: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:1530: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:242: warning - @param argument "parserName" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:143: warning - @param argument "xmlfile" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:315: warning - @param argument "resoponse" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:477: warning - @param argument "sessionid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:496: warning - @param argument "useXMLIndex" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2433: warning - @param argument "docId," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2433: warning - @param argument "out," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2433: warning - @param argument "user," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2433: warning - @param argument "groups," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXHandler.java:782: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXHandler.java:217: warning - @param argument "revision," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXNode.java:73: warning - @param argument "tagname" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXNode.java:99: warning - @param argument "tagname" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSimpleQuery.java:119: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSimpleQuery.java:59: warning - @param argument "query" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:92: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:126: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:92: warning - @param argument "forceRebuild" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:151: warning - @param argument "sourcetype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:151: warning - @param argument "targettype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:151: warning - @param argument "pw" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:151: warning - @param argument "params" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:447: warning - @param argument "forceRebuild" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:72: warning - @param argument "-dt" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:610: warning - @param argument "givenDocId," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:695: warning - @param argument "givenDocId," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:849: warning - @param argument "docId" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:870: warning - @param argument "docId" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:924: warning - @param argument "docid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:231: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:231: warning - @param argument "docid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:268: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:312: warning - @param argument "rootnodeid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:312: warning - @param argument "docname" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:312: warning - @param argument "doctype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:312: warning - @param argument "docid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:312: warning - @param argument "version," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:378: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:378: warning - @param argument "groupnames" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:461: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:628: warning - @param argument "input," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:628: warning - @param argument "," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:628: warning - @param argument "docHomeServer," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:628: warning - @param argument "notificationServer," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:805: warning - @param argument "accnum," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:805: warning - @param argument "action," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:805: warning - @param argument "serverCode," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:1079: warning - @param argument "pw" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:1120: warning - @param argument "pw" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:1431: warning - @param argument "pw" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:2710: warning - @param argument "filename" is not a parameter name. [javadoc] Building index for all the packages and classes... [javadoc] Building index for all classes... [javadoc] Generating /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/docs/api/help-doc.html... [javadoc] 100 warnings cgiPrepare: [exec] make: *** No rule to make target 'clean'. Stop. [exec] Result: 2 [exec] Checking if your kit is complete... [exec] Looks good [exec] Generating a Unix-style Makefile [exec] Writing Makefile for Metacat [exec] Writing MYMETA.yml and MYMETA.json [exec] cp Metacat.pm blib/lib/Metacat.pm [exec] AutoSplitting blib/lib/Metacat.pm (blib/lib/auto/Metacat) [exec] Manifying 1 pod document setMavenHome: [exec] Result: 1 [echo] Setting Maven home (maven.home) to '/usr/share/maven'. setTomcatCommon: setTomcatNoCommon: config: [echo] *********** set jsdk to /usr/share/tomcat7/lib/servlet-api.jar build-metacat-common: init: resolveDependencies: [echo] Moving Maven dependencies (${dependency.fileset}) to lib/maven [delete] Deleting directory /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/maven [copy] Copying 131 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/maven prepare: compile: [javac] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build.xml:604: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds [javac] Compiling 335 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/classes [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.7 [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 1 warning giteml: [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_2_BETA_4'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_2_BETA_4'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at 746fbd1b This commit was manufactured by cvs2svn to create tag 'RELEASE_EML_2_BETA_4'. [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_2_BETA_4 -> FETCH_HEAD [echo] git clone [exec] Cloning into 'build/tmp/eml_BRANCH_EML_2_0_0_BETA_6_FOR_METACAT'... [echo] git checkout [exec] Branch 'BRANCH_EML_2_0_0_BETA_6_FOR_METACAT' set up to track remote branch 'BRANCH_EML_2_0_0_BETA_6_FOR_METACAT' from 'origin'. [exec] Switched to a new branch 'BRANCH_EML_2_0_0_BETA_6_FOR_METACAT' [echo] git pull [exec] From https://github.com/NCEAS/eml [exec] * branch BRANCH_EML_2_0_0_BETA_6_FOR_METACAT -> FETCH_HEAD [exec] Already up to date. [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_2_0_0_UPDATE_1'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_2_0_0_UPDATE_1'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at aefd2957 This commit was manufactured by cvs2svn to create tag 'RELEASE_EML_2_0_0_UPDATE_1'. [echo] git pull [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_2_0_0_UPDATE_1 -> FETCH_HEAD [exec] Already up to date. [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_2_0_1'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_2_0_1'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at 95efe894 This commit was manufactured by cvs2svn to create tag 'RELEASE_EML_2_0_1'. [echo] git pull [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_2_0_1 -> FETCH_HEAD [exec] Already up to date. [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_2_1_0'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_2_1_0'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at ecd6ed31 This commit was manufactured by cvs2svn to create tag 'RELEASE_EML_2_1_0'. [echo] git pull [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_2_1_0 -> FETCH_HEAD [exec] Already up to date. [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_2_1_1'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_2_1_1'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at e80ac911 creating tag for EML 2.1.1 [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_2_1_1 -> FETCH_HEAD [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_UTILS_1_1_2'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_UTILS_1_1_2'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at 9543fcf2 Tag for EML stylesheets for Metacat 2.5.0 release [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_UTILS_1_1_2 -> FETCH_HEAD [echo] git clone [exec] Cloning into 'build/tmp/eml_RELEASE_EML_2_2_0'... [echo] git checkout [exec] Note: checking out 'RELEASE_EML_2_2_0'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at 233427f0 Update release target to include generated site. [echo] git pull [exec] Already up to date. [exec] From https://github.com/NCEAS/eml [exec] * tag RELEASE_EML_2_2_0 -> FETCH_HEAD getemlpre2: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/dtd [copy] Copying 13 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/dtd [copy] Copying 17 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/style/common getemlpre2beta4: [copy] Copying 14 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/dtd geteml2+: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.0.0 [copy] Copying 24 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.0.0 [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.0.1 [copy] Copying 24 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.0.1 [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.1.0 [copy] Copying 25 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.1.0 Trying to override old definition of task antlib:org.apache.maven.artifact.ant:dependencies Trying to override old definition of task antlib:org.apache.maven.artifact.ant:install Trying to override old definition of task antlib:org.apache.maven.artifact.ant:deploy Trying to override old definition of task antlib:org.apache.maven.artifact.ant:install-provider Trying to override old definition of task antlib:org.apache.maven.artifact.ant:mvn Trying to override old definition of task antlib:org.apache.maven.artifact.ant:writepom Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:localRepository Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:remoteRepository Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:authentication Trying to override old definition of datatype antlib:org.apache.maven.artifact.ant:proxy Trying to override old definition of task antlib:org.apache.maven.artifact.ant:pom copyxsl: [copy] Copying 28 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/style/common/eml-2 [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/style/common [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.1.1 [copy] Copying 25 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.1.1 [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.2.0 [copy] Copying 27 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/schema/eml-2.2.0 getConversionXSL: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/style/common/emlb6toeml2 [copy] Copying 7 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/lib/style/common/emlb6toeml2 geteml: jar: [jar] Building jar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/metacat.jar client: [javac] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build.xml:632: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds clientjar: [jar] Building jar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/metacat-client.jar harvester: [javac] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build.xml:658: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds [javac] Compiling 11 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/classes [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.7 [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 1 warning harvesterjar: [jar] Building jar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/harvester.jar testPrepare: [echo] in testPrepare [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/test [copy] Copying 6 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/test javadoc: [javadoc] Generating Javadoc [javadoc] Javadoc execution [javadoc] Loading source files for package edu.ucsb.nceas.dbadapter... [javadoc] Loading source files for package edu.ucsb.nceas.metacat... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.accesscontrol... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin.upgrade... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin.upgrade.dataone... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.admin.upgrade.solr... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.advancedsearch... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.annotation... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.authentication... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.cart... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.client... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.client.rest... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.clientview... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.database... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.convert... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.hazelcast... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.resourcemap... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataone.v1... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.dataquery... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.doi.datacite... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.event... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.harvesterClient... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.index... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.lsid... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.harvester... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.provider.server... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.provider.server.catalog... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.oaipmh.provider.server.crosswalk... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.plugin... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.properties... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.replication... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.restservice... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.restservice.v1... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.restservice.v2... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.scheduler... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.service... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.shared... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.spatial... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.util... [javadoc] Loading source files for package edu.ucsb.nceas.metacat.workflow... [javadoc] Loading source files for package edu.ucsb.nceas.protocols.metacat... [javadoc] Loading source files for package edu.ucsb.nceas.shared.xsd... [javadoc] Constructing Javadoc information... [javadoc] Standard Doclet version 1.8.0_242 [javadoc] Building tree for all the packages and classes... [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/AbstractDatabase.java:158: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "58" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "45" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "45" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "47" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see:illegal character: "45" in "http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html" [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/dbadapter/OracleAdapter.java:137: warning - Tag @see: reference not found: http://www.oracle.com/technetwork/issue-archive/2006/06-sep/o56asktom-086197.html [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AccessionNumber.java:76: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AssociateAccessPolicy.java:139: warning - @param argument "parserName" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:60: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:99: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:99: warning - @param argument "user" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:110: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthInterface.java:110: warning - @param argument "authuser" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:129: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:533: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:637: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:737: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:801: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:816: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:1059: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthLdap.java:1075: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthSession.java:205: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:70: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:81: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:98: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:117: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:133: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:146: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:165: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthStub.java:177: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:97: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:114: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:131: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:150: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:166: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:179: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:205: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/AuthTest.java:217: warning - @returns is an unknown tag. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/CommentNode.java:45: warning - @param argument "nodetype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:477: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:496: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:1530: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:242: warning - @param argument "parserName" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:143: warning - @param argument "xmlfile" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:315: warning - @param argument "resoponse" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:477: warning - @param argument "sessionid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:496: warning - @param argument "useXMLIndex" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2433: warning - @param argument "docId," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2433: warning - @param argument "out," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2433: warning - @param argument "user," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBQuery.java:2433: warning - @param argument "groups," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXHandler.java:782: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXHandler.java:217: warning - @param argument "revision," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXNode.java:73: warning - @param argument "tagname" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSAXNode.java:99: warning - @param argument "tagname" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSimpleQuery.java:119: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBSimpleQuery.java:59: warning - @param argument "query" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:92: warning - @return tag has no arguments. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:126: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:92: warning - @param argument "forceRebuild" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:151: warning - @param argument "sourcetype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:151: warning - @param argument "targettype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:151: warning - @param argument "pw" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:151: warning - @param argument "params" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBTransform.java:447: warning - @param argument "forceRebuild" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:72: warning - @param argument "-dt" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:610: warning - @param argument "givenDocId," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:695: warning - @param argument "givenDocId," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:849: warning - @param argument "docId" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:870: warning - @param argument "docId" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DBUtil.java:924: warning - @param argument "docid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:231: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:231: warning - @param argument "docid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:268: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:312: warning - @param argument "rootnodeid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:312: warning - @param argument "docname" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:312: warning - @param argument "doctype" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:312: warning - @param argument "docid" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:312: warning - @param argument "version," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:378: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:378: warning - @param argument "groupnames" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:461: warning - @param argument "conn" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:628: warning - @param argument "input," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:628: warning - @param argument "," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:628: warning - @param argument "docHomeServer," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:628: warning - @param argument "notificationServer," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:805: warning - @param argument "accnum," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:805: warning - @param argument "action," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:805: warning - @param argument "serverCode," is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:1079: warning - @param argument "pw" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:1120: warning - @param argument "pw" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:1431: warning - @param argument "pw" is not a parameter name. [javadoc] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/src/edu/ucsb/nceas/metacat/DocumentImpl.java:2710: warning - @param argument "filename" is not a parameter name. [javadoc] Building index for all the packages and classes... [javadoc] Building index for all classes... [javadoc] Generating /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/docs/api/help-doc.html... [javadoc] 100 warnings admindoc: [exec] GRAPHVIZ_DOT=`which dot` `which java` -jar "/var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/../../tools/plantuml.jar" -config "/var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/../../tools/plantuml.conf" "/var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/*.rst" [exec] `which sphinx-build` -b html -d ../../../build/docs/doctrees source ../../../build/docs [exec] Running Sphinx v1.3.2 [exec] loading pickled environment... done [exec] building [mo]: targets for 0 po files that are out of date [exec] building [html]: targets for 0 source files that are out of date [exec] updating environment: 0 added, 3 changed, 0 removed [exec] reading sources... [ 33%] identifiers [exec] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/readonly.rst:: WARNING: document isn't included in any toctree [exec] reading sources... [ 66%] query-index [exec] reading sources... [100%] statistics-service [exec] [exec] looking for now-outdated files... none found [exec] pickling environment... done [exec] checking consistency... done [exec] preparing documents... done [exec] writing output... [ 20%] development [exec] writing output... [ 40%] identifiers [exec] writing output... [ 60%] index [exec] writing output... [ 80%] query-index [exec] writing output... [100%] statistics-service [exec] [exec] generating indices... genindex [exec] writing additional pages... search [exec] copying images... [ 12%] images/stats-query-sequence-diagram.png [exec] copying images... [ 25%] images/guid_insert.png [exec] copying images... [ 37%] images/guid_delete.png [exec] copying images... [ 50%] images/identifiers.png [exec] copying images... [ 62%] images/indexing-class-diagram.png [exec] copying images... [ 75%] images/guid_read.png [exec] copying images... [ 87%] images/guid_update.png [exec] copying images... [100%] themes/metacatui/static/metacat-logo-darkgray.png [exec] [exec] copying downloadable files... [100%] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/docs/user/metacat/source/_static/resourceMap_couture.1.1.rdf [exec] [exec] copying static files... done [exec] copying extra files... done [exec] dumping search index in English (code: en) ... done [exec] dumping object inventory... done [exec] build succeeded, 1 warning. [exec] [exec] Build finished. The HTML pages are in ../../../build/docs. documentation: warPrepare: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/lib [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF/sql [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/cgi-bin [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/docs [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/temp [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/style/common/templates [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/lib [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/lib [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/lib [copy] Copying 135 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/lib [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF [copy] Copying 440 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat [copy] Copying 1540 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat [copy] Copying 259 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat [copy] Copying 979 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/docs [copy] Copying 150 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF/sql [copy] Copying 47 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF/scripts [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/WEB-INF/scripts [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/cgi-bin [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/cgi-bin [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/lib [copy] Copying 7 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/war/metacat/temp install-spatial: [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist war: [war] Building war: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat.war build-metacat-index: [artifact:mvn] [INFO] Scanning for projects... [artifact:mvn] [INFO] [artifact:mvn] [INFO] -------------< edu.ucsb.nceas.metacat.index:metacat-index >------------- [artifact:mvn] [INFO] Building metacat-index 2.12.4 [artifact:mvn] [INFO] --------------------------------[ war ]--------------------------------- [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ metacat-index --- [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] BUILD SUCCESS [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Total time: 0.295 s [artifact:mvn] [INFO] Finished at: 2020-03-13T21:03:55Z [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Scanning for projects... [artifact:mvn] [INFO] [artifact:mvn] [INFO] -------------< edu.ucsb.nceas.metacat.index:metacat-index >------------- [artifact:mvn] [INFO] Building metacat-index 2.12.4 [artifact:mvn] [INFO] --------------------------------[ war ]--------------------------------- [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:copy-resources (copy-resources) @ metacat-index --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 11 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ metacat-index --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 44 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-compiler-plugin:2.3:compile (default-compile) @ metacat-index --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [INFO] Compiling 22 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-index/target/classes [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ metacat-index --- [artifact:mvn] [WARNING] Using platform encoding (UTF-8 actually) to copy filtered resources, i.e. build is platform dependent! [artifact:mvn] [INFO] Copying 30 resources [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-compiler-plugin:2.3:testCompile (default-testCompile) @ metacat-index --- [artifact:mvn] [WARNING] File encoding has not been set, using platform encoding UTF-8, i.e. build is platform dependent! [artifact:mvn] [INFO] Compiling 11 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-index/target/test-classes [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ metacat-index --- [artifact:mvn] [INFO] Surefire report directory: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-index/target/surefire-reports [artifact:mvn] [artifact:mvn] ------------------------------------------------------- [artifact:mvn] T E S T S [artifact:mvn] ------------------------------------------------------- [artifact:mvn] Running edu.ucsb.nceas.metacat.index.PortalSubprocessorTest [artifact:mvn] Processing documment: src/test/resources/collection/collection-example.xml [artifact:mvn] metacat-index 20200313-21:04:01: [ERROR]: Problem loading configuration: jar:file:/var/lib/jenkins/.m2/repository/org/dataone/d1_cn_index_processor/2.3.8/d1_cn_index_processor-2.3.8.jar!/org/dataone/configuration/config.xml [org.dataone.configuration.Settings:getConfiguration:109] [artifact:mvn] org.apache.commons.configuration.ConfigurationException: org.apache.commons.configuration.ConfigurationRuntimeException: org.apache.commons.configuration.ConfigurationException: Cannot locate configuration source file:///etc/dataone/node.properties [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.createConfigurationAt(DefaultConfigurationBuilder.java:849) [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.initCombinedConfiguration(DefaultConfigurationBuilder.java:699) [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.getConfiguration(DefaultConfigurationBuilder.java:601) [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.getConfiguration(DefaultConfigurationBuilder.java:566) [artifact:mvn] at org.dataone.configuration.Settings.getConfiguration(Settings.java:106) [artifact:mvn] at org.dataone.cn.index.util.PerformanceLogger.<init>(PerformanceLogger.java:18) [artifact:mvn] at org.dataone.cn.index.util.PerformanceLogger.<clinit>(PerformanceLogger.java:11) [artifact:mvn] at org.dataone.cn.indexer.parser.BaseXPathDocumentSubprocessor.<init>(BaseXPathDocumentSubprocessor.java:63) [artifact:mvn] at org.dataone.cn.indexer.parser.ScienceMetadataDocumentSubprocessor.<init>(ScienceMetadataDocumentSubprocessor.java:36) [artifact:mvn] at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) [artifact:mvn] at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) [artifact:mvn] at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) [artifact:mvn] at java.lang.reflect.Constructor.newInstance(Constructor.java:423) [artifact:mvn] at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:147) [artifact:mvn] at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:87) [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateBean(AbstractAutowireCapableBeanFactory.java:990) [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:943) [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:485) [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:456) [artifact:mvn] at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:294) [artifact:mvn] at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:225) [artifact:mvn] at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:291) [artifact:mvn] at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:193) [artifact:mvn] at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:607) [artifact:mvn] at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:925) [artifact:mvn] at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:472) [artifact:mvn] at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139) [artifact:mvn] at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:83) [artifact:mvn] at edu.ucsb.nceas.metacat.index.ApplicationController.getContext(ApplicationController.java:236) [artifact:mvn] at edu.ucsb.nceas.metacat.index.ApplicationController.initialize(ApplicationController.java:206) [artifact:mvn] at edu.ucsb.nceas.metacat.index.SolrIndexIT.generateSolrIndex(SolrIndexIT.java:56) [artifact:mvn] at edu.ucsb.nceas.metacat.index.PortalSubprocessorTest.getPortalSubprocessor(PortalSubprocessorTest.java:120) [artifact:mvn] at edu.ucsb.nceas.metacat.index.PortalSubprocessorTest.testProcessDocument(PortalSubprocessorTest.java:73) [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) [artifact:mvn] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) [artifact:mvn] at java.lang.reflect.Method.invoke(Method.java:498) [artifact:mvn] at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) [artifact:mvn] at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) [artifact:mvn] at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) [artifact:mvn] at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) [artifact:mvn] at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) [artifact:mvn] at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) [artifact:mvn] at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) [artifact:mvn] at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) [artifact:mvn] at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) [artifact:mvn] at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) [artifact:mvn] at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) [artifact:mvn] at org.junit.runners.ParentRunner.run(ParentRunner.java:236) [artifact:mvn] at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) [artifact:mvn] at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) [artifact:mvn] at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) [artifact:mvn] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) [artifact:mvn] at java.lang.reflect.Method.invoke(Method.java:498) [artifact:mvn] at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) [artifact:mvn] at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) [artifact:mvn] at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) [artifact:mvn] at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) [artifact:mvn] at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) [artifact:mvn] Caused by: org.apache.commons.configuration.ConfigurationRuntimeException: org.apache.commons.configuration.ConfigurationException: Cannot locate configuration source file:///etc/dataone/node.properties [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:335) [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:352) [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:366) [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.createConfigurationAt(DefaultConfigurationBuilder.java:844) [artifact:mvn] ... 60 more [artifact:mvn] Caused by: org.apache.commons.configuration.ConfigurationException: Cannot locate configuration source file:///etc/dataone/node.properties [artifact:mvn] at org.apache.commons.configuration.AbstractFileConfiguration.load(AbstractFileConfiguration.java:249) [artifact:mvn] at org.apache.commons.configuration.AbstractFileConfiguration.load(AbstractFileConfiguration.java:229) [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder$FileConfigurationProvider.getConfiguration(DefaultConfigurationBuilder.java:1419) [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder$ConfigurationBeanFactory.createBean(DefaultConfigurationBuilder.java:1308) [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:330) [artifact:mvn] ... 63 more [artifact:mvn] metacat-index 20200313-21:04:01: [ERROR]: Problem loading configuration: jar:file:/var/lib/jenkins/.m2/repository/org/dataone/d1_cn_index_generator/2.3.3/d1_cn_index_generator-2.3.3.jar!/org/dataone/configuration/config.xml [org.dataone.configuration.Settings:getConfiguration:109] [artifact:mvn] org.apache.commons.configuration.ConfigurationException: org.apache.commons.configuration.ConfigurationRuntimeException: org.apache.commons.configuration.ConfigurationException: Cannot locate configuration source file:///etc/dataone/index/d1client.properties [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.createConfigurationAt(DefaultConfigurationBuilder.java:849) [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.initCombinedConfiguration(DefaultConfigurationBuilder.java:699) [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.getConfiguration(DefaultConfigurationBuilder.java:601) [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.getConfiguration(DefaultConfigurationBuilder.java:566) [artifact:mvn] at org.dataone.configuration.Settings.getConfiguration(Settings.java:106) [artifact:mvn] at org.dataone.cn.index.util.PerformanceLogger.<init>(PerformanceLogger.java:18) [artifact:mvn] at org.dataone.cn.index.util.PerformanceLogger.<clinit>(PerformanceLogger.java:11) [artifact:mvn] at org.dataone.cn.indexer.parser.BaseXPathDocumentSubprocessor.<init>(BaseXPathDocumentSubprocessor.java:63) [artifact:mvn] at org.dataone.cn.indexer.parser.ScienceMetadataDocumentSubprocessor.<init>(ScienceMetadataDocumentSubprocessor.java:36) [artifact:mvn] at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) [artifact:mvn] at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) [artifact:mvn] at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) [artifact:mvn] at java.lang.reflect.Constructor.newInstance(Constructor.java:423) [artifact:mvn] at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:147) [artifact:mvn] at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:87) [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateBean(AbstractAutowireCapableBeanFactory.java:990) [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:943) [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:485) [artifact:mvn] at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:456) [artifact:mvn] at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:294) [artifact:mvn] at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:225) [artifact:mvn] at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:291) [artifact:mvn] at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:193) [artifact:mvn] at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:607) [artifact:mvn] at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:925) [artifact:mvn] at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:472) [artifact:mvn] at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139) [artifact:mvn] at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:83) [artifact:mvn] at edu.ucsb.nceas.metacat.index.ApplicationController.getContext(ApplicationController.java:236) [artifact:mvn] at edu.ucsb.nceas.metacat.index.ApplicationController.initialize(ApplicationController.java:206) [artifact:mvn] at edu.ucsb.nceas.metacat.index.SolrIndexIT.generateSolrIndex(SolrIndexIT.java:56) [artifact:mvn] at edu.ucsb.nceas.metacat.index.PortalSubprocessorTest.getPortalSubprocessor(PortalSubprocessorTest.java:120) [artifact:mvn] at edu.ucsb.nceas.metacat.index.PortalSubprocessorTest.testProcessDocument(PortalSubprocessorTest.java:73) [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) [artifact:mvn] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) [artifact:mvn] at java.lang.reflect.Method.invoke(Method.java:498) [artifact:mvn] at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44) [artifact:mvn] at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) [artifact:mvn] at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41) [artifact:mvn] at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) [artifact:mvn] at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76) [artifact:mvn] at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50) [artifact:mvn] at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193) [artifact:mvn] at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52) [artifact:mvn] at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191) [artifact:mvn] at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42) [artifact:mvn] at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184) [artifact:mvn] at org.junit.runners.ParentRunner.run(ParentRunner.java:236) [artifact:mvn] at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) [artifact:mvn] at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) [artifact:mvn] at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) [artifact:mvn] at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) [artifact:mvn] at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) [artifact:mvn] at java.lang.reflect.Method.invoke(Method.java:498) [artifact:mvn] at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) [artifact:mvn] at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) [artifact:mvn] at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) [artifact:mvn] at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) [artifact:mvn] at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) [artifact:mvn] Caused by: org.apache.commons.configuration.ConfigurationRuntimeException: org.apache.commons.configuration.ConfigurationException: Cannot locate configuration source file:///etc/dataone/index/d1client.properties [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:335) [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:352) [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:366) [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder.createConfigurationAt(DefaultConfigurationBuilder.java:844) [artifact:mvn] ... 60 more [artifact:mvn] Caused by: org.apache.commons.configuration.ConfigurationException: Cannot locate configuration source file:///etc/dataone/index/d1client.properties [artifact:mvn] at org.apache.commons.configuration.AbstractFileConfiguration.load(AbstractFileConfiguration.java:249) [artifact:mvn] at org.apache.commons.configuration.AbstractFileConfiguration.load(AbstractFileConfiguration.java:229) [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder$FileConfigurationProvider.getConfiguration(DefaultConfigurationBuilder.java:1419) [artifact:mvn] at org.apache.commons.configuration.DefaultConfigurationBuilder$ConfigurationBeanFactory.createBean(DefaultConfigurationBuilder.java:1308) [artifact:mvn] at org.apache.commons.configuration.beanutils.BeanHelper.createBean(BeanHelper.java:330) [artifact:mvn] ... 63 more [artifact:mvn] query field value: "(((text:*soil* AND (keywords:soil AND attribute:soil) AND (dateUploaded:[1800-01-01T00:00:00Z TO 2019-12-01T00:00:00Z] AND beginDate:[1800-01-01T00:00:00Z TO 2019-12-01T00:00:00Z]) AND isPublic:true AND numberReplicas:[1 TO *]) AND (-obsoletedBy:* AND formatType:METADATA)))" [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-full.xml [artifact:mvn] query field value: "((((isPartOf:urn\:uuid\:349aa330-4645-4dab-a02d-3bf950cf708i OR seriesId:urn\:uuid\:4297479f-edf6-4740-aaaa-f1291e3c2e86) OR (text:soil AND (-keywords:"*soil carbon*" AND -attribute:"*soil carbon*") AND (dateUploaded:[1800-01-01T00:00:00Z TO 2009-12-31T23:59:59Z] AND beginDate:[1800-01-01T00:00:00Z TO 2009-12-31T23:59:59Z]) AND isPublic:true AND numberReplicas:[1 TO *] AND southBoundCoord:[1.03 TO 141.78] AND northBoundCoord:5)) AND (-obsoletedBy:* AND formatType:METADATA)) OR ((id:urn\:uuid\:55be0c0e-c77a-4971-9ea7-16acc65d5f04 OR id:urn\:uuid\:23242117-0024-4028-9064-0abbbf4fa4e6)))" [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-seriesId.xml [artifact:mvn] query field value: "(((seriesId:urn\:uuid\:1234) AND (-obsoletedBy:* AND formatType:METADATA)))" [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-sasap.xml [artifact:mvn] query field value: "((((isPartOf:urn\:uuid\:7c959e15-d309-4850-91e8-399c0e862893) OR (text:*test* AND (datePublished:[1919-01-01T00:00:00Z TO 2019-12-31T00:00:00Z] AND dateUploaded:[1919-01-01T00:00:00Z TO 2019-12-31T00:00:00Z]) AND documents:*)) AND (-obsoletedBy:* AND formatType:METADATA)))" [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-multiple-pids.xml [artifact:mvn] query field value: "(((isPartOf:urn\:uuid\:349aa330-4645-4dab-a02d-3bf950cf708i) AND (-obsoletedBy:* AND formatType:METADATA)) OR ((id:doi\:10.5072/FK2CF9SR7F OR id:urn\:uuid\:43a50d52-ced4-4dc5-8000-7ec40803b7c2 OR id:urn\:uuid\:9cc96524-391f-4dcb-8b0b-8cef053da26f OR id:knb.26.2)))" [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-only-pids.xml [artifact:mvn] query field value: "((id:doi\:10.5072/FK2CF9SR7F OR id:urn\:uuid\:43a50d52-ced4-4dc5-8000-7ec40803b7c2 OR id:urn\:uuid\:9cc96524-391f-4dcb-8b0b-8cef053da26f OR id:knb.26.2))" [artifact:mvn] Processing documment: src/test/resources/collection/portal-example-multiple-fields-values.xml [artifact:mvn] query field value: "((((keywords:soil AND keywords:carbon AND attribute:soil AND attribute:carbon)) AND (-obsoletedBy:* AND formatType:METADATA)) OR ((id:doi\:10.5072/FK2CF9SR7F OR id:urn\:uuid\:43a50d52-ced4-4dc5-8000-7ec40803b7c2 OR id:urn\:uuid\:9cc96524-391f-4dcb-8b0b-8cef053da26f OR id:knb.26.2)))" [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.172 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.index.annotation.MetacatRdfXmlSubprocessorTest [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:2c20432e-116a-4085-b8d6-abfc4b2dada2</field><field name="prov_wasDerivedFrom">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field><field name="prov_generatedByProgram">urn:uuid:4c9d9509-4772-4131-9aec-9a9d5ccd8f8a</field><field name="prov_generatedByExecution">urn:uuid:9ceeaeb3-6ef3-4b1e-bc4d-96e299fab3a4</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:e534b2ab-3a1b-44ed-8a99-ce54a0487aea</field><field name="prov_usedByProgram">urn:uuid:d2fcd5c0-2755-411e-b969-0b5f8eb47d75</field><field name="prov_usedByExecution">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field><field name="prov_hasDerivations">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field><field name="prov_wasDerivedFrom">urn:uuid:ee635a61-c930-444d-8214-db65178a1a47</field><field name="prov_wasDerivedFrom">urn:uuid:23495598-d50b-4317-b0e1-05a9d9e52632</field><field name="prov_wasDerivedFrom">urn:uuid:672ba6c5-8812-4c05-a324-246af172c67a</field><field name="prov_wasDerivedFrom">urn:uuid:e534b2ab-3a1b-44ed-8a99-ce54a0487aea</field><field name="prov_generatedByProgram">urn:uuid:d2fcd5c0-2755-411e-b969-0b5f8eb47d75</field><field name="prov_generatedByExecution">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_usedByProgram">urn:uuid:4c9d9509-4772-4131-9aec-9a9d5ccd8f8a</field><field name="prov_usedByExecution">urn:uuid:9ceeaeb3-6ef3-4b1e-bc4d-96e299fab3a4</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field><field name="prov_hasDerivations">urn:uuid:2c20432e-116a-4085-b8d6-abfc4b2dada2</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:d2fcd5c0-2755-411e-b969-0b5f8eb47d75</field><field name="prov_used">urn:uuid:ee635a61-c930-444d-8214-db65178a1a47</field><field name="prov_used">urn:uuid:23495598-d50b-4317-b0e1-05a9d9e52632</field><field name="prov_used">urn:uuid:672ba6c5-8812-4c05-a324-246af172c67a</field><field name="prov_used">urn:uuid:e534b2ab-3a1b-44ed-8a99-ce54a0487aea</field><field name="prov_generated">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field><field name="prov_wasExecutedByExecution">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Program</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:ee635a61-c930-444d-8214-db65178a1a47</field><field name="prov_usedByProgram">urn:uuid:d2fcd5c0-2755-411e-b969-0b5f8eb47d75</field><field name="prov_usedByExecution">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field><field name="prov_hasDerivations">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:4c9d9509-4772-4131-9aec-9a9d5ccd8f8a</field><field name="prov_used">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field><field name="prov_generated">urn:uuid:2c20432e-116a-4085-b8d6-abfc4b2dada2</field><field name="prov_generated">urn:uuid:a0e104da-c925-4765-af60-29310de1b99a</field><field name="prov_wasExecutedByExecution">urn:uuid:9ceeaeb3-6ef3-4b1e-bc4d-96e299fab3a4</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Program</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">resourceMap_urn:uuid:04780847-6082-455b-9831-22269c9ec0a6</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:23495598-d50b-4317-b0e1-05a9d9e52632</field><field name="prov_usedByProgram">urn:uuid:d2fcd5c0-2755-411e-b969-0b5f8eb47d75</field><field name="prov_usedByExecution">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field><field name="prov_hasDerivations">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:9ceeaeb3-6ef3-4b1e-bc4d-96e299fab3a4</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Execution</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:e029b6e4-be07-442b-a54e-2d0aca657294</field><field name="prov_instanceOfClass">http://www.openarchives.org/ore/terms/ResourceMap</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:a0e104da-c925-4765-af60-29310de1b99a</field><field name="prov_generatedByProgram">urn:uuid:4c9d9509-4772-4131-9aec-9a9d5ccd8f8a</field><field name="prov_generatedByExecution">urn:uuid:9ceeaeb3-6ef3-4b1e-bc4d-96e299fab3a4</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:672ba6c5-8812-4c05-a324-246af172c67a</field><field name="prov_usedByProgram">urn:uuid:d2fcd5c0-2755-411e-b969-0b5f8eb47d75</field><field name="prov_usedByExecution">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Data</field><field name="prov_hasDerivations">urn:uuid:621a115f-f1ed-4bef-bca5-f8741793a540</field></doc> [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">urn:uuid:d8e46217-2650-42b2-896f-0f006b1a2d3b</field><field name="prov_instanceOfClass">http://purl.dataone.org/provone/2015/01/15/ontology#Execution</field></doc> [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.678 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.index.annotation.OntologyModelServiceTest [artifact:mvn] FOOBAR: edu.ucsb.nceas.metacat.index.annotation.OntologyModelService [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.416 sec [artifact:mvn] Running edu.ucsb.nceas.metacat.index.annotation.EmlAnnotationSubprocessorTest [artifact:mvn] after process, the solr doc is [artifact:mvn] <doc><field name="id">eml-annotation-scimeta</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00000536</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00000514</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00000513</field><field name="sem_annotation">http://ecoinformatics.org/oboe/oboe.1.2/oboe-core.owl#MeasurementType</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00001105</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00000531</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00001143</field><field name="sem_annotation">http://purl.dataone.org/odo/ECSO_00001242</field></doc> [artifact:mvn] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.135 sec [artifact:mvn] [artifact:mvn] Results : [artifact:mvn] [artifact:mvn] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0 [artifact:mvn] [artifact:mvn] [INFO] [artifact:mvn] [INFO] --- maven-war-plugin:2.2:war (default-war) @ metacat-index --- [artifact:mvn] [INFO] Packaging webapp [artifact:mvn] [INFO] Assembling webapp [metacat-index] in [/var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-index/target/metacat-index-2.12.4] [artifact:mvn] [INFO] Processing war project [artifact:mvn] [INFO] Copying webapp resources [/var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-index/src/main/webapp] [artifact:mvn] [INFO] Webapp assembled in [348 msecs] [artifact:mvn] [INFO] Building war: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-index/target/metacat-index-2.12.4.war [artifact:mvn] [INFO] WEB-INF/web.xml already added, skipping [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] BUILD SUCCESS [artifact:mvn] [INFO] ------------------------------------------------------------------------ [artifact:mvn] [INFO] Total time: 12.057 s [artifact:mvn] [INFO] Finished at: 2020-03-13T21:04:08Z [artifact:mvn] [INFO] ------------------------------------------------------------------------ dist-metacat-index: [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist getMetacatUI: [echo] git clone [exec] Cloning into 'build/metacatui_build'... [echo] git checkout [exec] Note: checking out '2.7.0'. [exec] [exec] You are in 'detached HEAD' state. You can look around, make experimental [exec] changes and commit them, and you can discard any commits you make in this [exec] state without impacting any branches by performing another checkout. [exec] [exec] If you want to create a new branch to retain commits you create, you may [exec] do so (now or later) by using -b with the checkout command again. Example: [exec] [exec] git checkout -b <new-branch-name> [exec] [exec] HEAD is now at c00090778 Change version to 2.7.0 [echo] git pull [exec] From https://github.com/NCEAS/metacatui [exec] * tag 2.7.0 -> FETCH_HEAD [exec] Already up to date. build-metacat-ui: [war] Building war: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacatui.war build-metacat: prepare-lsid: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/lsid [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/lsid/WEB-INF/classes [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/lsid/WEB-INF/classes [copy] Copying 1 file to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/lsid/WEB-INF [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/lsid/WEB-INF/classes/edu/ucsb/nceas/metacat/lsid [copy] Copying 9 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/lsid/WEB-INF/classes/edu/ucsb/nceas/metacat/lsid [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/lsid/services [copy] Copying 2 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/lsid/services [copy] Copying 3 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/lsid [copy] Copying 2 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/lsid/WEB-INF/classes compile-lsid: [javac] /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build.xml:1695: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds [javac] Compiling 4 source files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/lsid/WEB-INF/classes [javac] warning: [options] bootstrap class path not set in conjunction with -source 1.7 [javac] Note: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/src/edu/ucsb/nceas/metacat/lsid/LSIDAuthorityMetaData.java uses unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 1 warning war-lsid: [war] Building war: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/authority.war distbin: [copy] Copying 47 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist [zip] Building zip: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-bin-2.12.4.zip [tar] Building tar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-bin-2.12.4.tar [gzip] Building: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-bin-2.12.4.tar.gz [delete] Deleting: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-bin-2.12.4.tar get-ecogrid: [svn] Using command line interface Svn : Exporting export -r HEAD https://code.ecoinformatics.org/code/seek/tags/ECOGRID_1_2_3/projects/ecogrid /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/seek/projects/ecogrid --force A build/seek/projects/ecogrid A build/seek/projects/ecogrid/src A build/seek/projects/ecogrid/src/org A build/seek/projects/ecogrid/src/org/ecoinformatics A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/lsid A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/web A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/util A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/service A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/bindings A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/ui A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/_EcogridUpdateRegEntryRequestElement.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/_EcogridAddRegEntryRequestElement.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/_EcogridQueryRegServiceResponseElement.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/ui/EcogridProcessor.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/EcogridRegEntryArrayType.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/ui/DocTypesPanel.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/ui/EcogridProcessorListener.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/RegEntry.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/put A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/authenticatedqueryservice A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/ui/RegistryViewer.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/ui/RegBaseDlg.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/EcoRegInterfaceService.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/authenticatedqueryservice/impl A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/authorize A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/auth A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/EcoRegInterfaceServiceLocator.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/ui/LoginDlg.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/EcoRegInterface.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/impl A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/queryservice A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/authenticatedqueryservice/impl/EcogridQueryToMetacatQueryTransformer.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/authenticatedqueryservice/impl/MetacatAuthenticatedQueryServiceImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/impl/EcogridJavaToMetacatJavaQueryTransformer.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/impl/MetacatImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/queryservice/util A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/EcoRegInterfaceServiceSoapBindingStub.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/put/MetacatPutImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/auth/MetacatAuthImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/lsid/IdentifierService.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/queryservice/util/EcogridResultsetFactory.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/client A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/queryservice/QueryServiceClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/queryservice/util/EcogridQueryParser.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/queryservice/util/EcogridResultsetTransformer.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/client/AuthenticationServiceClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/queryservice/util/EcogridQueryTransformer.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/client/IdentifierServiceClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl/EcoRegistryImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/queryservice/QueryServiceGetToStreamClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/client/AuthorizationServiceClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/client/EcogridFactoryAuthClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl/RegistryServiceImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl/EcoRegClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/authenticatedqueryservice A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/srb A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/srb/impl A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/authenticatedqueryservice/AuthenticatedQueryServiceClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/authenticatedqueryservice/AuthenticatedQueryServiceGetToStreamClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/srb/put A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/srb/impl/SRBuri.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl/EcoRegMetacat.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl/EcoReg.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/client/EcogridRegistryClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl/EcogridRegistryService.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl/EcogridJSPBeanIFace.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl/EcoRegInterfaceServiceImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/geon A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/geon/impl A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl/EcogridJSPBaseBean.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl/EcogridJSPGlobusBean.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl/RegEntry.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/digirquery A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/geon/impl/GEONImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/impl/EcogridJSPBeanFactory.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/web/searchScripts.js A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/threadpool A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/digiruddi A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/web/registry.jsp A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/web/queryForm.jsp A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/web/resultset.xsl A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/util/RegistryEntryTypeTransformer.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/util/RegistryEntryTypeParser.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/servlet A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/providerinfo A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/EcogridRegEntryType.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/service/EcoRegInterfaceLevelOneService.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/service/EcoRegInterfaceLevelOneServiceLocator.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/service A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/service/EcoRegInterfaceLevelOneServiceGridLocator.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/bindings/EcoRegInterfaceLevelOneSOAPBindingStub.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/_EcogridGetAllRegServicesResponseElement.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/_EcogridQueryRegServiceRequestElement.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/_EcogridGetAllRegServicesRequestElement.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/_EcogridRemoveRegEntryRequestElement.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/stub/EcogridRegEntryType_documentType.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/client/EcogridFactoryPutClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/ui/RegEntryDlg.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/ui/ProvidersPanel.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/EcoRegConstants.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/EcoRegInterfaceServiceGridLocator.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/bindings A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/srb/impl/SRBImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/registry/EcoRegInterfacePortType.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/authorize/MetacatAuthorizeImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/digirquery/DigirResultsetTransformer.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/threadpool/DaemonThreadFactory.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/servlet/DigirProviderServlet.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/metacat/impl/MetacatResultsetParser.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/queryservice/util/EcogridResultsetParser.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/srb/impl/SrbEcogridQuery.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/geon/impl/EcogridJavaToGEONJavaQueryTransformer.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/digirquery/QueryFromDigirProvider.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/DateUtil.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/service/EcoGridAuthInterfaceLevelOneServiceLocator.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/service/EcoGridQueryLevelOneServiceLocator.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/srb/impl/SRB2ResultsetType.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/EcogridAuthLoginRequestElementType.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/EcogridPutElementType.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/EcoGridFault.java A build/seek/projects/ecogrid/src/xsd A build/seek/projects/ecogrid/src/xsd/xslt A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/EcogridObjType.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/EcoGridConstant.java A build/seek/projects/ecogrid/src/xsd/query.xsd A build/seek/projects/ecogrid/src/xsd/AuthorizationService.wsdl A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/srb/put/SrbPutImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/DigirImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/EcogridJavaToDigirJavaQueryTransformer.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/DigirGetImpl.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/providerinfo/DigirSchemaMapping.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/service/EcoGridAuthInterfaceLevelOneService.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/service/EcoGridPutInterfaceLevelOneServiceGridLocator.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/EcoGridAuthInterfaceLevelOnePortType.java A build/seek/projects/ecogrid/src/xsd/uddi A build/seek/projects/ecogrid/src/xsd/EarthGrid-methods-api.doc A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/client/PutServiceClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/client/RegistryServiceClient.java A build/seek/projects/ecogrid/src/xsd_reg A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/digiruddi/DigirGetProviders.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/providerinfo/ProviderInfo.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/client/EcogridFactoryRegistryClient.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/srb/impl/SRBProxyImpl.java A build/seek/projects/ecogrid/src/xsd/emlQuery.xsd A build/seek/projects/ecogrid/src/xsd_reg/ecogridregistry.205.22.dtd A build/seek/projects/ecogrid/buildfiles A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/EcogridUtils.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/service/EcoGridPutInterfaceLevelOneService.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/service/EcoGridQueryLevelOneServiceGridLocator.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/srb/impl/SeekXMLQueryDocSRBParser.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/geon/impl/GEONJavaToEcogridJavaResultsetTransformer.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/digirquery/DigirQuery.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/digiruddi/GetPropertiesFromDigirProvider.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/digir/impl/providerinfo/DigirSchemaInfo.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/service/EcoGridAuthInterfaceLevelOneServiceGridLocator.java A build/seek/projects/ecogrid/tests A build/seek/projects/ecogrid/tests/stress-test A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/bindings/EcoGridQueryLevelOneServiceSOAPBindingStub.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/InvalidSessionFault.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/EcogridUtilsNamedNodeIterator.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/service/EcoGridPutInterfaceLevelOneServiceLocator.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/service/EcoGridQueryLevelOneService.java A build/seek/projects/ecogrid/tests/testfiles A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/EcoGridFTPTransfer.java A build/seek/projects/ecogrid/src/xsd/AuthenticatedQueryService.wsdl A build/seek/projects/ecogrid/src/xsd/AuthenticationService.wsdl A build/seek/projects/ecogrid/src/xsd/EcoGridQueryInterfaceLevelTwo.wsdl A build/seek/projects/ecogrid/buildfiles/identifierService.xml A build/seek/projects/ecogrid/buildfiles/AuthenticatedQueryService.xml A build/seek/projects/ecogrid/tests/stress-test/query-1.xml A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/bindings/EcoGridAuthInterfaceLevelOneSOAPBindingStub.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/EcoGridPutInterfaceLevelOnePortType.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/Get.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/EcoGridErrorCode.java A build/seek/projects/ecogrid/src/xsd/xslt/ecogridToPathquery.xsl A build/seek/projects/ecogrid/tests/stress-test/submit-raw.py A build/seek/projects/ecogrid/tests/testfiles/srb-test_1.xml A build/seek/projects/ecogrid/tests/testfiles/srb-lter.xml A build/seek/projects/ecogrid/src/xsd/uddi/inquire_v2.wsdl A build/seek/projects/ecogrid/src/xsd_reg/RegistryService.wsdl A build/seek/projects/ecogrid/buildfiles/metacatAuthorize.xml A build/seek/projects/ecogrid/tests/testfiles/query-test-err.xml A build/seek/projects/ecogrid/tests/testfiles/resultset-test-v2.xml A build/seek/projects/ecogrid/tests/testfiles/query-test-2.1.0.xml A build/seek/projects/ecogrid/tests/testfiles/service_registry_example.xml A build/seek/projects/ecogrid/src/xsd/resultset.xsd A build/seek/projects/ecogrid/src/xsd/PutService.wsdl A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/bindings/EcoGridPutInterfaceLevelOneSOAPBindingStub.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/EcogridPutResponseElementType.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/stub/GetResponseType.java A build/seek/projects/ecogrid/src/org/ecoinformatics/ecogrid/EcoGridFTPClient.java A build/seek/projects/ecogrid/src/xsd/xslt/metacatToEcogridResultSet.xsl A build/seek/projects/ecogrid/tests/testfiles/eml-sample.xml A build/seek/projects/ecogrid/src/xsd/QueryService.wsdl A build/seek/projects/ecogrid/src/xsd/IdentifierService.wsdl A build/seek/projects/ecogrid/tests/org A build/seek/projects/ecogrid/tests/org/ecoinformatics A build/seek/projects/ecogrid/tests/org/ecoinformatics/ecogrid A build/seek/projects/ecogrid/src/xsd/EcoGridGetInterface.wsdl A build/seek/projects/ecogrid/src/xsd/queryInterface3.wsdl A build/seek/projects/ecogrid/tests/testfiles/manis_peromyscus1.xml A build/seek/projects/ecogrid/tests/org/ecoinformatics/ecogrid/client A build/seek/projects/ecogrid/buildfiles/base.xml A build/seek/projects/ecogrid/buildfiles/registry.xml A build/seek/projects/ecogrid/buildfiles/metacatAuth.xml A build/seek/projects/ecogrid/buildfiles/digir.xml A build/seek/projects/ecogrid/tests/stress-test/query-4.xml A build/seek/projects/ecogrid/tests/testfiles/query-test.xml A build/seek/projects/ecogrid/tests/org/ecoinformatics/ecogrid/ecogridtest A build/seek/projects/ecogrid/buildfiles/srb.xml A build/seek/projects/ecogrid/tests/stress-test/query-2.xml A build/seek/projects/ecogrid/tests/stress-test/extract-stats.sh A build/seek/projects/ecogrid/tests/testfiles/srb-test_2.xml A build/seek/projects/ecogrid/tests/testfiles/query-digir.xml A build/seek/projects/ecogrid/tests/testfiles/whywhere1.xml A build/seek/projects/ecogrid/tests/testfiles/manis_peromyscus-query.xml A build/seek/projects/ecogrid/tests/src A build/seek/projects/ecogrid/tests/src/org A build/seek/projects/ecogrid/tests/src/org/ecoinformatics A build/seek/projects/ecogrid/tests/src/org/ecoinformatics/ecogrid A build/seek/projects/ecogrid/tests/src/org/ecoinformatics/ecogrid/ecogridtest A build/seek/projects/ecogrid/lib A build/seek/projects/ecogrid/tests/org/ecoinformatics/ecogrid/client/QueryServiceClientTest.java A build/seek/projects/ecogrid/tests/org/ecoinformatics/ecogrid/client/AuthenticationServiceClientTest.java A build/seek/projects/ecogrid/tests/testfiles/resultset-test2.xml A build/seek/projects/ecogrid/tests/testfiles/querySample.xml A build/seek/projects/ecogrid/tests/testfiles/digir-resultset-verify.xml A build/seek/projects/ecogrid/tests/testfiles/resultset-digir-v2.xml A build/seek/projects/ecogrid/src/xsd/uddi/uddi_v2.xsd A build/seek/projects/ecogrid/src/xsd_reg/RegistryEntryType.xsd A build/seek/projects/ecogrid/buildfiles/metacatImpl.xml A build/seek/projects/ecogrid/buildfiles/metacatPut.xml A build/seek/projects/ecogrid/tests/TestDigirQuery.java A build/seek/projects/ecogrid/tests/TestQueryAndResults.java A build/seek/projects/ecogrid/buildfiles/geon.xml A build/seek/projects/ecogrid/tests/stress-test/query-3.xml A build/seek/projects/ecogrid/tests/stress-test/driver.sh A build/seek/projects/ecogrid/tests/testfiles/resultset-digir.xml A build/seek/projects/ecogrid/tests/testfiles/resultset-test.xml A build/seek/projects/ecogrid/tests/testfiles/whywhere2.xml A build/seek/projects/ecogrid/tests/testfiles/resultset-srb-v2.xml A build/seek/projects/ecogrid/tests/testfiles/eml-non-public-readable-sample.xml A build/seek/projects/ecogrid/tests/testfiles/dataset.txt A build/seek/projects/ecogrid/tests/testfiles/digir-query-verify.xml A build/seek/projects/ecogrid/lib/axis-1_3 A build/seek/projects/ecogrid/lib/AuthenticatedQueryServiceDeploy.wsdd A build/seek/projects/ecogrid/tests/testfiles/eml-non-public-readable-sample-2.1.0.xml A build/seek/projects/ecogrid/tests/testfiles/service_registry_example_geon.xml A build/seek/projects/ecogrid/tests/testfiles/manis_peromyscus-query-verify.xml A build/seek/projects/ecogrid/tests/testfiles/metacatresultset-test.xml A build/seek/projects/ecogrid/lib/utilities.jar A build/seek/projects/ecogrid/tests/org/ecoinformatics/ecogrid/client/AuthenticatedQueryServiceClientTest.java A build/seek/projects/ecogrid/tests/org/ecoinformatics/ecogrid/client/RegistryServiceClientTest.java A build/seek/projects/ecogrid/tests/TestEcogridRegistry.java A build/seek/projects/ecogrid/tests/testfiles/eml-sample-2.1.0.xml A build/seek/projects/ecogrid/tests/testfiles/service_registry_example_digir.xml A build/seek/projects/ecogrid/tests/testfiles/digir-resultset.xml A build/seek/projects/ecogrid/tests/testfiles/sendDoc.py A build/seek/projects/ecogrid/tests/org/ecoinformatics/ecogrid/client/QueryServiceGetToStreamClientTest.java A build/seek/projects/ecogrid/lib/QueryServiceDeploy.wsdd A build/seek/projects/ecogrid/lib/AuthorizationServiceDeploy.wsdd A build/seek/projects/ecogrid/lib/metacat-client.jar A build/seek/projects/ecogrid/tests/org/ecoinformatics/ecogrid/client/AuthenticatedQueryServiceGetToStreamClientTest.java A build/seek/projects/ecogrid/tests/org/ecoinformatics/ecogrid/client/IdentifierServiceClientTest.java A build/seek/projects/ecogrid/tests/TestMetacatQuery.java A build/seek/projects/ecogrid/lib/ecogrid_client_lib A build/seek/projects/ecogrid/tests/org/ecoinformatics/ecogrid/client/PutServiceClientTest.java A build/seek/projects/ecogrid/tests/build.xml A build/seek/projects/ecogrid/lib/namespace2package.mappings A build/seek/projects/ecogrid/lib/QueryServiceUndeploy.wsdd A build/seek/projects/ecogrid/lib/RegistryServiceDeploy.wsdd A build/seek/projects/ecogrid/lib/IdentifierServiceUndeploy.wsdd A build/seek/projects/ecogrid/lib/lsid-client.jar A build/seek/projects/ecogrid/lib/regnamespace2package.mappings A build/seek/projects/ecogrid/lib/PutServiceDeploy.wsdd A build/seek/projects/ecogrid/tests/org/ecoinformatics/ecogrid/ecogridtest/MetacatImplTest.java A build/seek/projects/ecogrid/tests/src/org/ecoinformatics/ecogrid/ecogridtest/EcoGridFTPTransferTest.java A build/seek/projects/ecogrid/lib/server-config.wsdd A build/seek/projects/ecogrid/lib/AuthenticationServiceDeploy.wsdd A build/seek/projects/ecogrid/lib/junit.jar A build/seek/projects/ecogrid/lib/RegistryServiceUndeploy.wsdd A build/seek/projects/ecogrid/lib/metacat.jar A build/seek/projects/ecogrid/lib/AuthenticatedQueryServiceUndeploy.wsdd A build/seek/projects/ecogrid/lib/PutServiceUndeploy.wsdd A build/seek/projects/ecogrid/lib/AuthenticationServiceUndeploy.wsdd A build/seek/projects/ecogrid/lib/httpclient.jar A build/seek/projects/ecogrid/lib/axis-1_3/jaxrpc.jar A build/seek/projects/ecogrid/lib/IdentifierServiceDeploy.wsdd A build/seek/projects/ecogrid/lib/axis-1_3/saaj.jar A build/seek/projects/ecogrid/lib/jargon.jar A build/seek/projects/ecogrid/lib/axis-1_3/axis.jar A build/seek/projects/ecogrid/lib/axis-1_3/commons-logging-1.0.4.jar A build/seek/projects/ecogrid/docs A build/seek/projects/ecogrid/lib/axis-1_3/axis-ant.jar A build/seek/projects/ecogrid/lib/axis-1_3/commons-discovery-0.2.jar A build/seek/projects/ecogrid/lib/README.jars A build/seek/projects/ecogrid/lib/ecogrid_client_lib/ecogrid-query-levelone-client.jar A build/seek/projects/ecogrid/lib/xalan.jar A build/seek/projects/ecogrid/lib/backport-util-concurrent.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/EcoGridAuthInterfaceLevelOne-stub.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/wsdl4j.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/saaj.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/jaxrpc.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/commons-logging.jar A build/seek/projects/ecogrid/docs/meeting-notes A build/seek/projects/ecogrid/lib/web.xml.tomcat5 A build/seek/projects/ecogrid/lib/gsi-config.zip A build/seek/projects/ecogrid/lib/ecogrid_client_lib/ecogrid-put-levelone-client.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/org.ecoinformatics.ecogrid.EcoGridQueryInterfaceLevelOne-stub.jar A build/seek/projects/ecogrid/docs/registry.readme.txt A build/seek/projects/ecogrid/docs/gt3.2-installation-linux.txt A build/seek/projects/ecogrid/docs/SRB.readme.txt A build/seek/projects/ecogrid/lib/axis-1_3/log4j-1.2.8.jar A build/seek/projects/ecogrid/lib/MetacatConfig.xml A build/seek/projects/ecogrid/lib/ecogrid_client_lib/EcoGridPutInterfaceLevelOne-stub.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/cryptix32.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/commons-discovery.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/log4j-core.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/cog-jglobus.jar A build/seek/projects/ecogrid/docs/meeting-notes/ecogrid-overview-jones-20031022.ppt A build/seek/projects/ecogrid/docs/meeting-notes/ecogrid-mtg-notes-20030923.txt A build/seek/projects/ecogrid/lib/ecogrid_client_lib/ogsa.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/cryptix.jar A build/seek/projects/ecogrid/lib/web.xml A build/seek/projects/ecogrid/lib/security-config-levelone.xml A build/seek/projects/ecogrid/lib/ecogrid_client_lib/xml-apis-1.1.jar A build/seek/projects/ecogrid/docs/metacat-introduction.ppt A build/seek/projects/ecogrid/docs/DiGIR.readme.txt A build/seek/projects/ecogrid/docs/dev A build/seek/projects/ecogrid/docs/QueryInterface A build/seek/projects/ecogrid/lib/ecogrid_client_lib/puretls.jar A build/seek/projects/ecogrid/lib/EcoRegImplWithoutSecurity.wsdd A build/seek/projects/ecogrid/lib/beanMapping A build/seek/projects/ecogrid/docs/createWebServiceForMetacat.txt A build/seek/projects/ecogrid/docs/DiGIR.doc A build/seek/projects/ecogrid/docs/Metacat.readme.txt A build/seek/projects/ecogrid/docs/meeting-notes/ecogrid-conf-call-notes-20040115.txt A build/seek/projects/ecogrid/docs/meeting-notes/Ecogrid-23Sep2003.jnt A build/seek/projects/ecogrid/docs/meeting-notes/writeAPI_24Sep2003.jnt A build/seek/projects/ecogrid/docs/meeting-notes/Ecogrid-23Sep2003.png A build/seek/projects/ecogrid/docs/meeting-notes/Ecogrid-23Sep2003.svgz A build/seek/projects/ecogrid/docs/meeting-notes/writeAPI_24Sep2003.mht A build/seek/projects/ecogrid/docs/meeting-notes/seattle-23Sep2003notes.txt A build/seek/projects/ecogrid/docs/meeting-notes/ecogrid-seattle-agenda-20030922.txt A build/seek/projects/ecogrid/docs/meeting-notes/readme.txt A build/seek/projects/ecogrid/conf A build/seek/projects/ecogrid/conf/RegistryServiceImpl A build/seek/projects/ecogrid/conf/RegistryServiceImpl/classes A build/seek/projects/ecogrid/docs/meeting-notes/SEEK_02Apr2003.jnt A build/seek/projects/ecogrid/docs/QueryInterface/queryTokenizerEngine.doc A build/seek/projects/ecogrid/docs/QueryInterface/eqi_search.gdot A build/seek/projects/ecogrid/docs/meeting-notes/SEEK_Eco-GRiD_OBJECT_DRAFT.svg A build/seek/projects/ecogrid/conf/MetacatImpl A build/seek/projects/ecogrid/conf/MetacatImpl/classes A build/seek/projects/ecogrid/docs/meeting-notes/SEEK_02Apr2003.mht A build/seek/projects/ecogrid/docs/meeting-notes/SEEK_Eco-GRiD_OBJECT_DRAFT.jnt A build/seek/projects/ecogrid/docs/gt3-installaion-linux.html A build/seek/projects/ecogrid/docs/QueryInterface/eqi_retrieve.gdot A build/seek/projects/ecogrid/conf/IdentifierService A build/seek/projects/ecogrid/conf/SRBImpl A build/seek/projects/ecogrid/conf/SRBImpl/classes A build/seek/projects/ecogrid/docs/QueryInterface/ReadMe.txt A build/seek/projects/ecogrid/docs/QueryInterface/default.css A build/seek/projects/ecogrid/conf/RegistryServiceImpl/classes/log4j.properties A build/seek/projects/ecogrid/conf/MetacatImpl/server-config.wsdd A build/seek/projects/ecogrid/conf/SRBImpl/classes/log4j.properties A build/seek/projects/ecogrid/conf/GEONImpl A build/seek/projects/ecogrid/conf/GEONImpl/classes A build/seek/projects/ecogrid/conf/DigirImpl A build/seek/projects/ecogrid/docs/meeting-notes/SEEK_02Apr2003.svg A build/seek/projects/ecogrid/docs/QueryInterface/resultset.htm A build/seek/projects/ecogrid/build.properties A build/seek/projects/ecogrid/conf/RegistryServiceImpl/axis-index.html A build/seek/projects/ecogrid/conf/MetacatImpl/axis-index.html A build/seek/projects/ecogrid/conf/DigirImpl/classes A build/seek/projects/ecogrid/conf/SRBImpl/web.xml A build/seek/projects/ecogrid/docs/dev/getMethod.ai A build/seek/projects/ecogrid/docs/QueryInterface/queryInterface.html A build/seek/projects/ecogrid/docs/QueryInterface/ReadMe.html A build/seek/projects/ecogrid/docs/QueryInterface/query.htm A build/seek/projects/ecogrid/conf/RegistryServiceImpl/classes/metacat.properties A build/seek/projects/ecogrid/conf/MetacatImpl/classes/log4j.properties A build/seek/projects/ecogrid/conf/IdentifierService/web.xml A build/seek/projects/ecogrid/conf/GEONImpl/classes/log4j.properties A build/seek/projects/ecogrid/conf/DigirImpl/Providers.jsp A build/seek/projects/ecogrid/lsid A build/seek/projects/ecogrid/lsid/lib A build/seek/projects/ecogrid/lsid/lib/lsid_lib A build/seek/projects/ecogrid/conf/DigirImpl/web.xml A build/seek/projects/ecogrid/loadregistryschema.sql A build/seek/projects/ecogrid/conf/DigirImpl/classes/log4j.properties A build/seek/projects/ecogrid/build.xml A build/seek/projects/ecogrid/lsid/lib/lsid_lib/wsdl4j.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/saaj.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/axis-ant.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/metacat-client.jar A build/seek/projects/ecogrid/lsid/conf A build/seek/projects/ecogrid/lsid/lib/lsid_lib/xercesImpl.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/axis.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/commons-discovery.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/httpclient.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/dnsjava-1.3.2.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/log4j-1.2.8.jar A build/seek/projects/ecogrid/lsid/conf/lsid_conf A build/seek/projects/ecogrid/lsid/conf/lsid_conf/services A build/seek/projects/ecogrid/lsid/conf/lsid_conf/WEB-INF A build/seek/projects/ecogrid/lsid/lib/lsid_lib/xml-apis.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/activation.jar A build/seek/projects/ecogrid/lsid/conf/lsid_conf/services/default-services.xml A build/seek/projects/ecogrid/lsid/conf/lsid_conf/templates A build/seek/projects/ecogrid/lsid/lib/lsid_lib/lsid-server-1.1.1.jar A build/seek/projects/ecogrid/lsid/conf/lsid_conf/templates/metacat.xslt.tmpl A build/seek/projects/ecogrid/lsid/lib/lsid_lib/lsid-client-1.1.1.jar A build/seek/projects/ecogrid/lsid/conf/lsid_conf/WEB-INF/server-config.wsdd A build/seek/projects/ecogrid/lsid/conf/lsid_conf/templates/preds.xml.tmpl A build/seek/projects/ecogrid/lsid/src A build/seek/projects/ecogrid/lsid/src/org A build/seek/projects/ecogrid/lsid/src/org/ecoinformatics A build/seek/projects/ecogrid/lsid/src/org/ecoinformatics/ecogrid A build/seek/projects/ecogrid/lsid/src/org/ecoinformatics/ecogrid/lsid A build/seek/projects/ecogrid/lsid/conf/lsid_conf/templates/mdasdl.xml.tmpl A build/seek/projects/ecogrid/lsid/lib/lsid_lib/castor-0.9.5.jar A build/seek/projects/ecogrid/lsid/conf/lsid_conf/services/metacat-services.xml A build/seek/projects/ecogrid/lsid/conf/lsid_conf/templates/metacat.properties.tmpl A build/seek/projects/ecogrid/lsid/src/org/ecoinformatics/ecogrid/lsid/LSIDDataLookup.java A build/seek/projects/ecogrid/lsid/src/org/ecoinformatics/ecogrid/lsid/LSIDAuthorityMain.java A build/seek/projects/ecogrid/lsid/src/org/ecoinformatics/ecogrid/lsid/metacat.xslt A build/seek/projects/ecogrid/lsid/src/org/ecoinformatics/ecogrid/lsid/mdasdl.xml A build/seek/projects/ecogrid/lsid/src/org/ecoinformatics/ecogrid/lsid/preds.xml A build/seek/projects/ecogrid/lsid/build.xml A build/seek/projects/ecogrid/readme.html A build/seek/projects/ecogrid/buildsrb.xml A build/seek/projects/ecogrid/lsid/build.properties A build/seek/projects/ecogrid/README A build/seek/projects/ecogrid/lib/kepler.jar A build/seek/projects/ecogrid/lib/axis-1_3/wsdl4j-1.5.1.jar A build/seek/projects/ecogrid/lib/axis-1_3/axis-schema.jar A build/seek/projects/ecogrid/lib/commons-httpclient-2.0.2.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/ecogrid-auth-levelone-client.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/axis.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/cog-axis.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/jce-jdk13-117.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/xmlsec.jar A build/seek/projects/ecogrid/lib/ecogrid_client_lib/cryptix-asn1.jar A build/seek/projects/ecogrid/lib/putnamespace2package.mappings A build/seek/projects/ecogrid/lib/build.properties A build/seek/projects/ecogrid/docs/SRB_in_Ecogrid.ppt A build/seek/projects/ecogrid/docs/Ecogrid.readme.txt A build/seek/projects/ecogrid/docs/meeting-notes/ecogrid-write-api-20040511.txt A build/seek/projects/ecogrid/docs/meeting-notes/writeAPI_24Sep2003.svgz A build/seek/projects/ecogrid/docs/meeting-notes/Ecogrid-23Sep2003.mht A build/seek/projects/ecogrid/docs/meeting-notes/ecogrid-overview-jones-20030923.ppt A build/seek/projects/ecogrid/docs/meeting-notes/SEEK_Eco-GRiD_OBJECT_DRAFT.mht A build/seek/projects/ecogrid/docs/meeting-notes/ecogrid-query-interface.txt A build/seek/projects/ecogrid/docs/QueryInterface/queryInterface.txt A build/seek/projects/ecogrid/docs/QueryInterface/QueryFlow.ppt A build/seek/projects/ecogrid/docs/QueryInterface/gen_xsdDocs.bat A build/seek/projects/ecogrid/conf/RegistryServiceImpl/server-config.wsdd A build/seek/projects/ecogrid/conf/RegistryServiceImpl/web.xml A build/seek/projects/ecogrid/conf/MetacatImpl/web.xml A build/seek/projects/ecogrid/conf/GEONImpl/web.xml A build/seek/projects/ecogrid/conf/DigirImpl/index.html A build/seek/projects/ecogrid/identifierService-INSTALL A build/seek/projects/ecogrid/lsid/lib/lsid_lib/utilities.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/mail.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/jaxrpc.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/commons-logging.jar A build/seek/projects/ecogrid/lsid/lib/lsid_lib/xalan.jar A build/seek/projects/ecogrid/lsid/conf/lsid_conf/WEB-INF/web.xml A build/seek/projects/ecogrid/lsid/conf/lsid_conf/templates/metacat-services.xml.tmpl A build/seek/projects/ecogrid/lsid/src/org/ecoinformatics/ecogrid/lsid/LSIDAuthorityMetaData.java A build/seek/projects/ecogrid/lsid/src/org/ecoinformatics/ecogrid/lsid/LSIDAuthorityData.java A build/seek/projects/ecogrid/srbput.xml Exported revision 3474. protocol: [jar] Building jar: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/build/protocol.jar dist: [mkdir] Created dir: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.12.4 [copy] Copying 2938 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.12.4 [copy] Copied 405 empty directories to 8 empty directories under /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.12.4 [copy] Copying 110 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.12.4/docs [copy] Copied 26 empty directories to 3 empty directories under /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.12.4/docs [copy] Copying 102 files to /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/dist/metacat-2.12.4/docs [copy] Copying 978 files to 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[gzip] Building: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-src-2.12.4.tar.gz [delete] Deleting: /var/lib/jenkins/jobs/metacat_beta/workspace/metacat/metacat-src-2.12.4.tar fulldist: BUILD SUCCESSFUL Total time: 3 minutes 9 seconds [workspace] $ /bin/sh -xe /tmp/jenkins8914872144831290894.sh Publishing Javadoc Notifying upstream projects of job completion Finished: SUCCESS