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<h2 title="Uses of Class edu.ucsb.nceas.metacat.McdbException" class="title">Uses of Class<br>edu.ucsb.nceas.metacat.McdbException</h2>
</div>
<div class="classUseContainer">
<ul class="blockList">
<li class="blockList">
<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing packages, and an explanation">
<caption><span>Packages that use <a href="../../../../../edu/ucsb/nceas/metacat/McdbException.html" title="class in edu.ucsb.nceas.metacat">McdbException</a></span><span class="tabEnd"> </span></caption>
<tr>
<th class="colFirst" scope="col">Package</th>
<th class="colLast" scope="col">Description</th>
</tr>
<tbody>
<tr class="altColor">
<td class="colFirst"><a href="#edu.ucsb.nceas.metacat">edu.ucsb.nceas.metacat</a></td>
<td class="colLast"> </td>
</tr>
<tr class="rowColor">
<td class="colFirst"><a href="#edu.ucsb.nceas.metacat.accesscontrol">edu.ucsb.nceas.metacat.accesscontrol</a></td>
<td class="colLast"> </td>
</tr>
<tr class="altColor">
<td class="colFirst"><a href="#edu.ucsb.nceas.metacat.dataone">edu.ucsb.nceas.metacat.dataone</a></td>
<td class="colLast"> </td>
</tr>
<tr class="rowColor">
<td class="colFirst"><a href="#edu.ucsb.nceas.metacat.replication">edu.ucsb.nceas.metacat.replication</a></td>
<td class="colLast"> </td>
</tr>
</tbody>
</table>
</li>
<li class="blockList">
<ul class="blockList">
<li class="blockList"><a name="edu.ucsb.nceas.metacat">
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<h3>Uses of <a href="../../../../../edu/ucsb/nceas/metacat/McdbException.html" title="class in edu.ucsb.nceas.metacat">McdbException</a> in <a href="../../../../../edu/ucsb/nceas/metacat/package-summary.html">edu.ucsb.nceas.metacat</a></h3>
<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing subclasses, and an explanation">
<caption><span>Subclasses of <a href="../../../../../edu/ucsb/nceas/metacat/McdbException.html" title="class in edu.ucsb.nceas.metacat">McdbException</a> in <a href="../../../../../edu/ucsb/nceas/metacat/package-summary.html">edu.ucsb.nceas.metacat</a></span><span class="tabEnd"> </span></caption>
<tr>
<th class="colFirst" scope="col">Modifier and Type</th>
<th class="colLast" scope="col">Class and Description</th>
</tr>
<tbody>
<tr class="altColor">
<td class="colFirst"><code>class </code></td>
<td class="colLast"><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/McdbDocNotFoundException.html" title="class in edu.ucsb.nceas.metacat">McdbDocNotFoundException</a></span></code>
<div class="block">Exception thrown when an error occurs because a document with a
given ID could not be found in the metacat database.</div>
</td>
</tr>
</tbody>
</table>
<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
<caption><span>Methods in <a href="../../../../../edu/ucsb/nceas/metacat/package-summary.html">edu.ucsb.nceas.metacat</a> that throw <a href="../../../../../edu/ucsb/nceas/metacat/McdbException.html" title="class in edu.ucsb.nceas.metacat">McdbException</a></span><span class="tabEnd"> </span></caption>
<tr>
<th class="colFirst" scope="col">Modifier and Type</th>
<th class="colLast" scope="col">Method and Description</th>
</tr>
<tbody>
<tr class="altColor">
<td class="colFirst"><code>void</code></td>
<td class="colLast"><span class="typeNameLabel">AssociateAccessPolicy.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/AssociateAccessPolicy.html#associateAccess--">associateAccess</a></span>()</code>
<div class="block">Associate the access policy of dataset to the docid which the data set id
mapped</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>void</code></td>
<td class="colLast"><span class="typeNameLabel">DocumentImpl.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/DocumentImpl.html#buildIndex--">buildIndex</a></span>()</code>
<div class="block">Build the index records for this document.</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>boolean</code></td>
<td class="colLast"><span class="typeNameLabel">Eml200SAXHandler.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/Eml200SAXHandler.html#compareInlineDataFiles-java.lang.String-java.lang.String-">compareInlineDataFiles</a></span>(java.lang.String oldFileName,
java.lang.String newFileName)</code> </td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>static java.util.Hashtable<java.lang.String,java.lang.String></code></td>
<td class="colLast"><span class="typeNameLabel">PermissionController.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/PermissionController.html#getUnReadableInlineDataIdList-java.lang.String-java.lang.String-java.lang.String:A-">getUnReadableInlineDataIdList</a></span>(java.lang.String docid,
java.lang.String user,
java.lang.String[] groups)</code>
<div class="block">A static method to get Hashtable which cointains a inlinedata object list that
user can't read it.</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>java.util.zip.ZipOutputStream</code></td>
<td class="colLast"><span class="typeNameLabel">DBQuery.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/DBQuery.html#getZippedPackage-java.lang.String-javax.servlet.ServletOutputStream-java.lang.String-java.lang.String:A-java.lang.String-">getZippedPackage</a></span>(java.lang.String docIdString,
javax.servlet.ServletOutputStream out,
java.lang.String user,
java.lang.String[] groups,
java.lang.String passWord)</code>
<div class="block">put a data packadge into a zip output stream</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>boolean</code></td>
<td class="colLast"><span class="typeNameLabel">PermissionController.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/PermissionController.html#hasPermissionForSubTreeNode-java.lang.String-java.lang.String:A-java.lang.String-long-">hasPermissionForSubTreeNode</a></span>(java.lang.String user,
java.lang.String[] groups,
java.lang.String myPermission,
long nodeId)</code>
<div class="block">The method to determine of a node can be access by a user just by subtree
access control</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>static boolean</code></td>
<td class="colLast"><span class="typeNameLabel">DocumentImpl.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/DocumentImpl.html#hasReadPermission-java.lang.String-java.lang.String:A-java.lang.String-">hasReadPermission</a></span>(java.lang.String user,
java.lang.String[] groups,
java.lang.String docId)</code>
<div class="block">Check for "READ" permission base on docid, user and group</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>java.util.Hashtable</code></td>
<td class="colLast"><span class="typeNameLabel">PermissionController.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/PermissionController.html#hasUnaccessableSubTree-java.lang.String-java.lang.String:A-java.lang.String-">hasUnaccessableSubTree</a></span>(java.lang.String user,
java.lang.String[] groups,
java.lang.String myPermission)</code>
<div class="block">This method will return a hasTable of subtree which user doesn't has the
permssion to access</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>static java.io.InputStream</code></td>
<td class="colLast"><span class="typeNameLabel">MetacatHandler.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/MetacatHandler.html#read-java.lang.String-">read</a></span>(java.lang.String docid)</code>
<div class="block">Read a document from metacat and return the InputStream.</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>java.io.InputStream</code></td>
<td class="colLast"><span class="typeNameLabel">DocumentImpl.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/DocumentImpl.html#readFromFileSystem-java.io.OutputStream-java.lang.String-java.lang.String:A-java.lang.String-">readFromFileSystem</a></span>(java.io.OutputStream out,
java.lang.String user,
java.lang.String[] groups,
java.lang.String documentPath)</code>
<div class="block">Read the XML document from the file system and write to a Writer.</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>void</code></td>
<td class="colLast"><span class="typeNameLabel">MetacatHandler.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/MetacatHandler.html#readFromMetacat-java.lang.String-java.lang.String-javax.servlet.http.HttpServletResponse-java.io.OutputStream-java.lang.String-java.lang.String-java.lang.String-java.lang.String:A-boolean-java.util.Hashtable-">readFromMetacat</a></span>(java.lang.String ipAddress,
java.lang.String userAgent,
javax.servlet.http.HttpServletResponse response,
java.io.OutputStream out,
java.lang.String docid,
java.lang.String qformat,
java.lang.String user,
java.lang.String[] groups,
boolean withInlineData,
java.util.Hashtable<java.lang.String,java.lang.String[]> params)</code>
<div class="block">read metadata or data from Metacat</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>static java.io.Reader</code></td>
<td class="colLast"><span class="typeNameLabel">Eml200SAXHandler.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/Eml200SAXHandler.html#readInlineDataFromFileSystem-java.lang.String-java.lang.String-">readInlineDataFromFileSystem</a></span>(java.lang.String fileName,
java.lang.String encoding)</code> </td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>java.lang.String</code></td>
<td class="colLast"><span class="typeNameLabel">DocumentImpl.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/DocumentImpl.html#readUsingSlowAlgorithm--">readUsingSlowAlgorithm</a></span>()</code>
<div class="block">Get a text representation of the XML document as a string This older
algorithm uses a recursive tree of Objects to represent the nodes of the
tree.</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>java.io.InputStream</code></td>
<td class="colLast"><span class="typeNameLabel">DocumentImpl.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/DocumentImpl.html#toXml-java.io.OutputStream-java.lang.String-java.lang.String:A-boolean-">toXml</a></span>(java.io.OutputStream out,
java.lang.String user,
java.lang.String[] groups,
boolean withInLineData)</code>
<div class="block">Print a text representation of the XML document to a Writer</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>void</code></td>
<td class="colLast"><span class="typeNameLabel">DocumentImpl.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/DocumentImpl.html#toXmlFromDb-java.io.OutputStream-java.lang.String-java.lang.String:A-boolean-">toXmlFromDb</a></span>(java.io.OutputStream outputStream,
java.lang.String user,
java.lang.String[] groups,
boolean withInLineData)</code>
<div class="block">Print a text representation of the XML document to a Writer</div>
</td>
</tr>
</tbody>
</table>
<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing constructors, and an explanation">
<caption><span>Constructors in <a href="../../../../../edu/ucsb/nceas/metacat/package-summary.html">edu.ucsb.nceas.metacat</a> that throw <a href="../../../../../edu/ucsb/nceas/metacat/McdbException.html" title="class in edu.ucsb.nceas.metacat">McdbException</a></span><span class="tabEnd"> </span></caption>
<tr>
<th class="colOne" scope="col">Constructor and Description</th>
</tr>
<tbody>
<tr class="altColor">
<td class="colLast"><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/DocumentImpl.html#DocumentImpl-java.lang.String-">DocumentImpl</a></span>(java.lang.String docid)</code>
<div class="block">Constructor, creates document from database connection, used for reading
the document</div>
</td>
</tr>
<tr class="rowColor">
<td class="colLast"><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/DocumentImpl.html#DocumentImpl-java.lang.String-boolean-">DocumentImpl</a></span>(java.lang.String accNum,
boolean readNodes)</code>
<div class="block">Constructor used to create a document and read the document information
from the database.</div>
</td>
</tr>
<tr class="altColor">
<td class="colLast"><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/PermissionController.html#PermissionController-java.lang.String-">PermissionController</a></span>(java.lang.String myDocid)</code>
<div class="block">Constructor for PermissionController</div>
</td>
</tr>
<tr class="rowColor">
<td class="colLast"><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/RelationHandler.html#RelationHandler-java.lang.String-java.lang.String-edu.ucsb.nceas.metacat.database.DBConnection-edu.ucsb.nceas.utilities.triple.TripleCollection-">RelationHandler</a></span>(java.lang.String docid,
java.lang.String doctype,
<a href="../../../../../edu/ucsb/nceas/metacat/database/DBConnection.html" title="class in edu.ucsb.nceas.metacat.database">DBConnection</a> conn,
edu.ucsb.nceas.utilities.triple.TripleCollection list)</code>
<div class="block">Constructor for this class.</div>
</td>
</tr>
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</li>
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</a>
<h3>Uses of <a href="../../../../../edu/ucsb/nceas/metacat/McdbException.html" title="class in edu.ucsb.nceas.metacat">McdbException</a> in <a href="../../../../../edu/ucsb/nceas/metacat/accesscontrol/package-summary.html">edu.ucsb.nceas.metacat.accesscontrol</a></h3>
<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing constructors, and an explanation">
<caption><span>Constructors in <a href="../../../../../edu/ucsb/nceas/metacat/accesscontrol/package-summary.html">edu.ucsb.nceas.metacat.accesscontrol</a> that throw <a href="../../../../../edu/ucsb/nceas/metacat/McdbException.html" title="class in edu.ucsb.nceas.metacat">McdbException</a></span><span class="tabEnd"> </span></caption>
<tr>
<th class="colOne" scope="col">Constructor and Description</th>
</tr>
<tbody>
<tr class="altColor">
<td class="colLast"><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/accesscontrol/AccessControlList.html#AccessControlList-edu.ucsb.nceas.metacat.database.DBConnection-java.lang.String-int-java.lang.String-java.lang.String:A-int-">AccessControlList</a></span>(<a href="../../../../../edu/ucsb/nceas/metacat/database/DBConnection.html" title="class in edu.ucsb.nceas.metacat.database">DBConnection</a> conn,
java.lang.String aclid,
int rev,
java.lang.String user,
java.lang.String[] groups,
int serverCode)</code>
<div class="block">Construct an instance of the AccessControlList class.</div>
</td>
</tr>
</tbody>
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<h3>Uses of <a href="../../../../../edu/ucsb/nceas/metacat/McdbException.html" title="class in edu.ucsb.nceas.metacat">McdbException</a> in <a href="../../../../../edu/ucsb/nceas/metacat/dataone/package-summary.html">edu.ucsb.nceas.metacat.dataone</a></h3>
<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
<caption><span>Methods in <a href="../../../../../edu/ucsb/nceas/metacat/dataone/package-summary.html">edu.ucsb.nceas.metacat.dataone</a> that throw <a href="../../../../../edu/ucsb/nceas/metacat/McdbException.html" title="class in edu.ucsb.nceas.metacat">McdbException</a></span><span class="tabEnd"> </span></caption>
<tr>
<th class="colFirst" scope="col">Modifier and Type</th>
<th class="colLast" scope="col">Method and Description</th>
</tr>
<tbody>
<tr class="altColor">
<td class="colFirst"><code>static org.dataone.service.types.v2.SystemMetadata</code></td>
<td class="colLast"><span class="typeNameLabel">SystemMetadataFactory.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/dataone/SystemMetadataFactory.html#createSystemMetadata-boolean-java.lang.String-boolean-boolean-">createSystemMetadata</a></span>(boolean indexDataFile,
java.lang.String localId,
boolean includeORE,
boolean downloadData)</code>
<div class="block">Creates a system metadata object for insertion into metacat</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>static org.dataone.service.types.v2.SystemMetadata</code></td>
<td class="colLast"><span class="typeNameLabel">SystemMetadataFactory.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/dataone/SystemMetadataFactory.html#createSystemMetadata-java.lang.String-boolean-boolean-">createSystemMetadata</a></span>(java.lang.String localId,
boolean includeORE,
boolean downloadData)</code>
<div class="block">Create a system metadata object for insertion into metacat</div>
</td>
</tr>
<tr class="altColor">
<td class="colFirst"><code>static void</code></td>
<td class="colLast"><span class="typeNameLabel">SystemMetadataFactory.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/dataone/SystemMetadataFactory.html#generateSystemMetadata-java.util.List-boolean-boolean-">generateSystemMetadata</a></span>(java.util.List<java.lang.String> idList,
boolean includeOre,
boolean downloadData)</code>
<div class="block">Generate SystemMetadata for any object in the object store that does
not already have it.</div>
</td>
</tr>
</tbody>
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</li>
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<h3>Uses of <a href="../../../../../edu/ucsb/nceas/metacat/McdbException.html" title="class in edu.ucsb.nceas.metacat">McdbException</a> in <a href="../../../../../edu/ucsb/nceas/metacat/replication/package-summary.html">edu.ucsb.nceas.metacat.replication</a></h3>
<table class="useSummary" border="0" cellpadding="3" cellspacing="0" summary="Use table, listing methods, and an explanation">
<caption><span>Methods in <a href="../../../../../edu/ucsb/nceas/metacat/replication/package-summary.html">edu.ucsb.nceas.metacat.replication</a> that throw <a href="../../../../../edu/ucsb/nceas/metacat/McdbException.html" title="class in edu.ucsb.nceas.metacat">McdbException</a></span><span class="tabEnd"> </span></caption>
<tr>
<th class="colFirst" scope="col">Modifier and Type</th>
<th class="colLast" scope="col">Method and Description</th>
</tr>
<tbody>
<tr class="altColor">
<td class="colFirst"><code>static java.lang.String</code></td>
<td class="colLast"><span class="typeNameLabel">ReplicationService.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/replication/ReplicationService.html#getDocumentInfo-java.lang.String-">getDocumentInfo</a></span>(java.lang.String docid)</code>
<div class="block">Gets a docInfo XML snippet for the replication API</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>static java.util.Hashtable<java.lang.String,java.lang.String></code></td>
<td class="colLast"><span class="typeNameLabel">ReplicationService.</span><code><span class="memberNameLink"><a href="../../../../../edu/ucsb/nceas/metacat/replication/ReplicationService.html#getDocumentInfoMap-java.lang.String-">getDocumentInfoMap</a></span>(java.lang.String docid)</code> </td>
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