Console Output
Established TCP socket on 36423
<===[JENKINS REMOTING CAPACITY]===> channel started
Executing Maven: -B -f /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/pom.xml clean install javadoc:javadoc
[INFO] Scanning for projects...
[WARNING]
[WARNING] Some problems were encountered while building the effective model for org.dataone:d1_cn_common:jar:2.2.0
[WARNING] 'build.plugins.plugin.version' for org.apache.felix:maven-bundle-plugin is missing. @ line 271, column 21
[WARNING] 'build.plugins.plugin.version' for org.apache.maven.plugins:maven-compiler-plugin is missing. @ line 218, column 21
[WARNING] 'build.plugins.plugin.version' for org.codehaus.mojo:buildnumber-maven-plugin is missing. @ line 226, column 21
[WARNING] 'build.plugins.plugin.version' for com.mycila.maven-license-plugin:maven-license-plugin is missing. @ line 264, column 21
[WARNING]
[WARNING] It is highly recommended to fix these problems because they threaten the stability of your build.
[WARNING]
[WARNING] For this reason, future Maven versions might no longer support building such malformed projects.
[WARNING]
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] Building DataONE_Cn_Common 2.2.0
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] --- maven-clean-plugin:2.3:clean (default-clean) @ d1_cn_common ---
[INFO]
[INFO] --- buildnumber-maven-plugin:1.2:create (default) @ d1_cn_common ---
[INFO] Checking for local modifications: skipped.
[INFO] Updating project files from SCM: skipped.
[INFO] Executing: /bin/sh -c cd /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common && svn --non-interactive info
[INFO] Working directory: /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common
[INFO] Storing buildNumber: 18144 at timestamp: 1465591031039
[INFO] Executing: /bin/sh -c cd /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common && svn --non-interactive info
[INFO] Working directory: /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common
[INFO] Storing buildScmBranch: branches/D1_CN_COMMON_v2.2
[INFO]
[INFO] --- maven-resources-plugin:2.3:resources (default-resources) @ d1_cn_common ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 1 resource
[INFO] Copying 1 resource
[INFO]
[INFO] --- maven-compiler-plugin:2.0.2:compile (default-compile) @ d1_cn_common ---
[INFO] Compiling 47 source files to /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/target/classes
[INFO]
[INFO] --- maven-resources-plugin:2.3:testResources (default-testResources) @ d1_cn_common ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 5 resources
[INFO]
[INFO] --- maven-compiler-plugin:2.0.2:testCompile (default-testCompile) @ d1_cn_common ---
[INFO] Compiling 11 source files to /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/target/test-classes
[INFO]
[INFO] --- maven-surefire-plugin:2.10:test (default-test) @ d1_cn_common ---
[INFO] Surefire report directory: /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/target/surefire-reports
-------------------------------------------------------
T E S T S
-------------------------------------------------------
Running org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase
20160610-20:37:19: [INFO]: proxy.request RequestURL: http://localhost:80/Mock/object/?fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.request RequestURI: /Mock/object/?fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.request PathInfo: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.request PathTranslated: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.request QueryString: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.request ContextPath: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.request ServletPath: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.request Method: GET [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.request toString:org.springframework.mock.web.MockHttpServletRequest@347e5c86 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.request.ParameterMap: fromDate 2012-03-07T22:00:00+00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.wrapper RequestURL: http://localhost:80/Mock/object/?fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.wrapper RequestURI: /Mock/object/?fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.wrapper PathInfo: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.wrapper PathTranslated: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.wrapper QueryString: fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.wrapper ContextPath: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.wrapper ServletPath: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.wrapper Method: GET [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.wrapper toString: org.dataone.cn.servlet.http.ProxyServletRequestWrapper@6ae97281 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: proxy.wrapper.ParameterMap: fromDate 2012-03-07T22:00:00+00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
20160610-20:37:19: [INFO]: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase]
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.322 sec
Running org.dataone.cn.ldap.LDAPServiceSuiteTest
20160610-20:37:22: [WARN]: ApacheDS shutdown hook has NOT been registered with the runtime. This default setting for standalone operation has been overriden. [org.apache.directory.server.core.DefaultDirectoryService]
20160610-20:37:26: [WARN]: You didn't change the admin password of directory service instance 'org'. Please update the admin password as soon as possible to prevent a possible security breach. [org.apache.directory.server.core.DefaultDirectoryService]
20160610-20:37:29: [DEBUG]: Using partition factory JdbmPartitionFactory [org.dataone.test.apache.directory.server.integ.ApacheDSSuiteRunner]
20160610-20:37:29: [DEBUG]: ClassLoader type: AppClassLoader [org.dataone.configuration.Settings]
20160610-20:37:29: [DEBUG]: TestSettings not found: assume production context [org.dataone.configuration.Settings]
20160610-20:37:29: [DEBUG]: Loading configuration: file:/var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/config.xml [org.dataone.configuration.Settings]
20160610-20:37:29: [DEBUG]: Creating configuration null with name null [org.apache.commons.configuration.DefaultConfigurationBuilder]
20160610-20:37:29: [DEBUG]: Base path set to file:///var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/ [org.apache.commons.configuration.PropertiesConfiguration]
20160610-20:37:29: [DEBUG]: Setting default value: false [org.apache.commons.beanutils.converters.BooleanConverter]
20160610-20:37:29: [DEBUG]: Converting 'Boolean' value 'false' to type 'Boolean' [org.apache.commons.beanutils.converters.BooleanConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Boolean [org.apache.commons.beanutils.converters.BooleanConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.ByteConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer' value '0' to type 'Byte' [org.apache.commons.beanutils.converters.ByteConverter]
20160610-20:37:29: [DEBUG]: Converted to Byte value '0' [org.apache.commons.beanutils.converters.ByteConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [org.apache.commons.beanutils.converters.CharacterConverter]
20160610-20:37:29: [DEBUG]: Converting 'Character' value ' ' to type 'Character' [org.apache.commons.beanutils.converters.CharacterConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Character [org.apache.commons.beanutils.converters.CharacterConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.DoubleConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer' value '0' to type 'Double' [org.apache.commons.beanutils.converters.DoubleConverter]
20160610-20:37:29: [DEBUG]: Converted to Double value '0.0' [org.apache.commons.beanutils.converters.DoubleConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.FloatConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer' value '0' to type 'Float' [org.apache.commons.beanutils.converters.FloatConverter]
20160610-20:37:29: [DEBUG]: Converted to Float value '0.0' [org.apache.commons.beanutils.converters.FloatConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.IntegerConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer' value '0' to type 'Integer' [org.apache.commons.beanutils.converters.IntegerConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Integer [org.apache.commons.beanutils.converters.IntegerConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.LongConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer' value '0' to type 'Long' [org.apache.commons.beanutils.converters.LongConverter]
20160610-20:37:29: [DEBUG]: Converted to Long value '0' [org.apache.commons.beanutils.converters.LongConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.ShortConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer' value '0' to type 'Short' [org.apache.commons.beanutils.converters.ShortConverter]
20160610-20:37:29: [DEBUG]: Converted to Short value '0' [org.apache.commons.beanutils.converters.ShortConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0.0 [org.apache.commons.beanutils.converters.BigDecimalConverter]
20160610-20:37:29: [DEBUG]: Converting 'BigDecimal' value '0.0' to type 'BigDecimal' [org.apache.commons.beanutils.converters.BigDecimalConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a BigDecimal [org.apache.commons.beanutils.converters.BigDecimalConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.BigIntegerConverter]
20160610-20:37:29: [DEBUG]: Converting 'BigInteger' value '0' to type 'BigInteger' [org.apache.commons.beanutils.converters.BigIntegerConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a BigInteger [org.apache.commons.beanutils.converters.BigIntegerConverter]
20160610-20:37:29: [DEBUG]: Setting default value: false [org.apache.commons.beanutils.converters.BooleanConverter]
20160610-20:37:29: [DEBUG]: Converting 'Boolean' value 'false' to type 'Boolean' [org.apache.commons.beanutils.converters.BooleanConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Boolean [org.apache.commons.beanutils.converters.BooleanConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.ByteConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer' value '0' to type 'Byte' [org.apache.commons.beanutils.converters.ByteConverter]
20160610-20:37:29: [DEBUG]: Converted to Byte value '0' [org.apache.commons.beanutils.converters.ByteConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [org.apache.commons.beanutils.converters.CharacterConverter]
20160610-20:37:29: [DEBUG]: Converting 'Character' value ' ' to type 'Character' [org.apache.commons.beanutils.converters.CharacterConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Character [org.apache.commons.beanutils.converters.CharacterConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.DoubleConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer' value '0' to type 'Double' [org.apache.commons.beanutils.converters.DoubleConverter]
20160610-20:37:29: [DEBUG]: Converted to Double value '0.0' [org.apache.commons.beanutils.converters.DoubleConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.FloatConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer' value '0' to type 'Float' [org.apache.commons.beanutils.converters.FloatConverter]
20160610-20:37:29: [DEBUG]: Converted to Float value '0.0' [org.apache.commons.beanutils.converters.FloatConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.IntegerConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer' value '0' to type 'Integer' [org.apache.commons.beanutils.converters.IntegerConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Integer [org.apache.commons.beanutils.converters.IntegerConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.LongConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer' value '0' to type 'Long' [org.apache.commons.beanutils.converters.LongConverter]
20160610-20:37:29: [DEBUG]: Converted to Long value '0' [org.apache.commons.beanutils.converters.LongConverter]
20160610-20:37:29: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.ShortConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer' value '0' to type 'Short' [org.apache.commons.beanutils.converters.ShortConverter]
20160610-20:37:29: [DEBUG]: Converted to Short value '0' [org.apache.commons.beanutils.converters.ShortConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [org.apache.commons.beanutils.converters.StringConverter]
20160610-20:37:29: [DEBUG]: Converting 'String' value '' to type 'String' [org.apache.commons.beanutils.converters.StringConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Z@3f29a9f5 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'boolean[]' value '[Z@3f29a9f5' to type 'boolean[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a boolean[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [B@48553438 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'byte[]' value '[B@48553438' to type 'byte[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a byte[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [C@51d76da1 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'char[]' value '[C@51d76da1' to type 'char[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a char[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [D@165e8f01 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'double[]' value '[D@165e8f01' to type 'double[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a double[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [F@19fe9620 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'float[]' value '[F@19fe9620' to type 'float[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a float[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [I@19321c35 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'int[]' value '[I@19321c35' to type 'int[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a int[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [J@28d9e87f [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'long[]' value '[J@28d9e87f' to type 'long[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a long[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [S@7a2efecc [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'short[]' value '[S@7a2efecc' to type 'short[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a short[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.math.BigDecimal;@235a41bf [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'BigDecimal[]' value '[Ljava.math.BigDecimal;@235a41bf' to type 'BigDecimal[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a BigDecimal[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.math.BigInteger;@252d9e34 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'BigInteger[]' value '[Ljava.math.BigInteger;@252d9e34' to type 'BigInteger[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a BigInteger[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.lang.Boolean;@5a25a41d [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'Boolean[]' value '[Ljava.lang.Boolean;@5a25a41d' to type 'Boolean[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Boolean[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.lang.Byte;@70b7a641 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'Byte[]' value '[Ljava.lang.Byte;@70b7a641' to type 'Byte[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Byte[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.lang.Character;@51b7d8ea [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'Character[]' value '[Ljava.lang.Character;@51b7d8ea' to type 'Character[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Character[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.lang.Double;@1393f867 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'Double[]' value '[Ljava.lang.Double;@1393f867' to type 'Double[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Double[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.lang.Float;@d41726b [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'Float[]' value '[Ljava.lang.Float;@d41726b' to type 'Float[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Float[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.lang.Integer;@25b9528e [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'Integer[]' value '[Ljava.lang.Integer;@25b9528e' to type 'Integer[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Integer[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.lang.Long;@67d53134 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'Long[]' value '[Ljava.lang.Long;@67d53134' to type 'Long[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Long[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.lang.Short;@7bf98858 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'Short[]' value '[Ljava.lang.Short;@7bf98858' to type 'Short[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Short[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.lang.String;@48abfa29 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'String[]' value '[Ljava.lang.String;@48abfa29' to type 'String[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a String[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.lang.Class;@1868eadb [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'Class[]' value '[Ljava.lang.Class;@1868eadb' to type 'Class[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Class[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.util.Date;@43b8eebd [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'Date[]' value '[Ljava.util.Date;@43b8eebd' to type 'Date[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Date[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.util.Calendar;@64703b1b [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'Calendar[]' value '[Ljava.util.Calendar;@64703b1b' to type 'Calendar[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a Calendar[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.io.File;@20d3e3b1 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'java.io.File[]' value '[Ljava.io.File;@20d3e3b1' to type 'java.io.File[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a java.io.File[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.sql.Date;@6cebf311 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'java.sql.Date[]' value '[Ljava.sql.Date;@6cebf311' to type 'java.sql.Date[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a java.sql.Date[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.sql.Time;@4ec4b821 [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'java.sql.Time[]' value '[Ljava.sql.Time;@4ec4b821' to type 'java.sql.Time[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a java.sql.Time[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.sql.Timestamp;@2b91d1af [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'java.sql.Timestamp[]' value '[Ljava.sql.Timestamp;@2b91d1af' to type 'java.sql.Timestamp[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a java.sql.Timestamp[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Setting default value: [Ljava.net.URL;@4bcd31cf [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: Converting 'java.net.URL[]' value '[Ljava.net.URL;@4bcd31cf' to type 'java.net.URL[]' [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:29: [DEBUG]: No conversion required, value is already a java.net.URL[] [org.apache.commons.beanutils.converters.ArrayConverter]
20160610-20:37:30: [DEBUG]: Convert string 'test-jdbc.properties' to class 'java.lang.String' [org.apache.commons.beanutils.ConvertUtils]
20160610-20:37:30: [DEBUG]: Converting 'String' value 'test-jdbc.properties' to type 'String' [org.apache.commons.beanutils.converters.StringConverter]
20160610-20:37:30: [DEBUG]: FileName set to test-jdbc.properties [org.apache.commons.configuration.PropertiesConfiguration]
20160610-20:37:30: [DEBUG]: ConfigurationUtils.locate(): base is file:///var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/, name is test-jdbc.properties [org.apache.commons.configuration.ConfigurationUtils]
20160610-20:37:30: [DEBUG]: Creating configuration null with name null [org.apache.commons.configuration.DefaultConfigurationBuilder]
20160610-20:37:30: [DEBUG]: Base path set to file:///var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/ [org.apache.commons.configuration.PropertiesConfiguration]
20160610-20:37:30: [DEBUG]: Convert string 'test-ldap.properties' to class 'java.lang.String' [org.apache.commons.beanutils.ConvertUtils]
20160610-20:37:30: [DEBUG]: Converting 'String' value 'test-ldap.properties' to type 'String' [org.apache.commons.beanutils.converters.StringConverter]
20160610-20:37:30: [DEBUG]: FileName set to test-ldap.properties [org.apache.commons.configuration.PropertiesConfiguration]
20160610-20:37:30: [DEBUG]: ConfigurationUtils.locate(): base is file:///var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/, name is test-ldap.properties [org.apache.commons.configuration.ConfigurationUtils]
20160610-20:37:30: [DEBUG]: Loading configuration: jar:file:/var/lib/jenkins/.m2/repository/org/dataone/d1_common_java/2.2.0/d1_common_java-2.2.0.jar!/org/dataone/configuration/config.xml [org.dataone.configuration.Settings]
20160610-20:37:30: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory]
20160610-20:37:30: [DEBUG]: Destroying context [org.dataone.cn.ldap.DirContextPooledObjectFactory]
20160610-20:37:30: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory]
20160610-20:37:31: [INFO]: Pooled Object Create Date = 2016-37-10 08:37:30.030 Current Time 2016-37-10 08:37:31.031 pooled object idle MS 1001 [org.dataone.cn.ldap.DirContextPooledObjectFactoryTestUnit]
20160610-20:37:31: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory]
20160610-20:37:31: [DEBUG]: Destroying context [org.dataone.cn.ldap.DirContextPooledObjectFactory]
20160610-20:37:31: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory]
20160610-20:37:31: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory]
20160610-20:37:31: [DEBUG]: Active Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:31: [DEBUG]: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:31: [DEBUG]: added dirContext #0 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:31: [DEBUG]: After Adding: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:31: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:31: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory]
20160610-20:37:31: [DEBUG]: added dirContext #1 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:31: [DEBUG]: After Adding: Active Dir Contexts: 2 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:31: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:32: [WARN]: Timeout waiting for idle object [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:32: [DEBUG]: After Exception: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:32: [DEBUG]: After Exception: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:32: [DEBUG]: added dirContext #2 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:32: [DEBUG]: After Adding: Active Dir Contexts: 2 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:32: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:32: [WARN]: Timeout waiting for idle object [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:32: [DEBUG]: After Exception: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:32: [DEBUG]: After Exception: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:32: [DEBUG]: added dirContext #3 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:32: [DEBUG]: After Adding: Active Dir Contexts: 2 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:32: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:33: [WARN]: Timeout waiting for idle object [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:33: [DEBUG]: After Exception: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:33: [DEBUG]: After Exception: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:33: [DEBUG]: added dirContext #4 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:33: [DEBUG]: After Adding: Active Dir Contexts: 2 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:33: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:33: [DEBUG]: After Returning: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:33: [DEBUG]: After Returning: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:33: [DEBUG]: Destroying context [org.dataone.cn.ldap.DirContextPooledObjectFactory]
20160610-20:37:33: [DEBUG]: After Returning: Active Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:33: [DEBUG]: After Returning: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit]
20160610-20:37:33: [DEBUG]: Added entry DC=test,DC=org [org.dataone.cn.ldap.LDAPService]
20160610-20:37:33: [DEBUG]: Added entry C=GH,DC=test,DC=org [org.dataone.cn.ldap.LDAPService]
20160610-20:37:33: [DEBUG]: Added entry O=Clydestone,C=GH,DC=test,DC=org [org.dataone.cn.ldap.LDAPService]
20160610-20:37:33: [DEBUG]: Added entry OU=Sales,O=Clydestone,C=GH,DC=test,DC=org [org.dataone.cn.ldap.LDAPService]
20160610-20:37:33: [DEBUG]: Removed entry: OU=Sales,O=Clydestone,C=GH,DC=test,DC=org [org.dataone.cn.ldap.LDAPService]
20160610-20:37:33: [DEBUG]: Found matching attribute: d1NodeApproved=* [org.dataone.cn.ldap.LDAPService]
20160610-20:37:33: [DEBUG]: Found matching attribute: d1NodeApproved=TRUE [org.dataone.cn.ldap.LDAPService]
20160610-20:37:33: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener]
20160610-20:37:33: [DEBUG]: Shuting down DS for org [org.dataone.test.apache.directory.server.integ.ApacheDSSuiteRunner]
20160610-20:37:33: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener]
20160610-20:37:33: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener]
20160610-20:37:33: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener]
20160610-20:37:33: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener]
20160610-20:37:33: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener]
20160610-20:37:33: [ERROR]: javax.naming.CommunicationException: connection closed [Root exception is java.io.IOException: connection closed]; remaining name 'dc=org' [org.dataone.cn.ldap.DirContextPooledObjectFactory]
javax.naming.CommunicationException: connection closed [Root exception is java.io.IOException: connection closed]; remaining name 'dc=org'
at com.sun.jndi.ldap.LdapCtx.doSearch(LdapCtx.java:2004)
at com.sun.jndi.ldap.LdapCtx.doSearchOnce(LdapCtx.java:1935)
at com.sun.jndi.ldap.LdapCtx.c_getAttributes(LdapCtx.java:1328)
at com.sun.jndi.toolkit.ctx.ComponentDirContext.p_getAttributes(ComponentDirContext.java:231)
at com.sun.jndi.toolkit.ctx.PartialCompositeDirContext.getAttributes(PartialCompositeDirContext.java:139)
at com.sun.jndi.toolkit.ctx.PartialCompositeDirContext.getAttributes(PartialCompositeDirContext.java:127)
at javax.naming.directory.InitialDirContext.getAttributes(InitialDirContext.java:142)
at javax.naming.directory.InitialDirContext.getAttributes(InitialDirContext.java:137)
at org.dataone.cn.ldap.DirContextPooledObjectFactory.validateObject(DirContextPooledObjectFactory.java:147)
at org.apache.commons.pool2.impl.GenericObjectPool.evict(GenericObjectPool.java:806)
at org.apache.commons.pool2.impl.BaseGenericObjectPool$Evictor.run(BaseGenericObjectPool.java:1036)
at java.util.TimerThread.mainLoop(Timer.java:555)
at java.util.TimerThread.run(Timer.java:505)
Caused by: java.io.IOException: connection closed
at com.sun.jndi.ldap.LdapClient.ensureOpen(LdapClient.java:1588)
at com.sun.jndi.ldap.LdapClient.search(LdapClient.java:532)
at com.sun.jndi.ldap.LdapCtx.doSearch(LdapCtx.java:1986)
... 12 more
20160610-20:37:33: [DEBUG]: Destroying context [org.dataone.cn.ldap.DirContextPooledObjectFactory]
Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 14.686 sec
Running org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest
20160610-20:37:33: [DEBUG]: Metacat Data Source JDBC settings: [org.dataone.cn.dao.MetacatDataSourceFactory]
20160610-20:37:33: [DEBUG]: metacat.datasource.url:jdbc:h2:mem:db1 [org.dataone.cn.dao.MetacatDataSourceFactory]
20160610-20:37:33: [DEBUG]: metacat.datasource.driverClass:org.h2.Driver [org.dataone.cn.dao.MetacatDataSourceFactory]
20160610-20:37:33: [DEBUG]: database.user:metacat [org.dataone.cn.dao.MetacatDataSourceFactory]
20160610-20:37:33: [DEBUG]: database.password:metacat [org.dataone.cn.dao.MetacatDataSourceFactory]
20160610-20:37:33: [DEBUG]: metacat.datasource.initialSize:3 [org.dataone.cn.dao.MetacatDataSourceFactory]
20160610-20:37:33: [DEBUG]: metacat.datasource.maxSize:15 [org.dataone.cn.dao.MetacatDataSourceFactory]
20160610-20:37:33: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:33: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('891f20463b023bef25758cabee18b460.1.1', NULL, '1', '2013-08-01 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'c3450ab5803151f78e9e8f91f30f285a', 'MD5', '', '', '2013-08-01 10:17:42.117', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.1.0', '7482', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', '', '', '2013-07-31 15:29:44.429', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('261585355b62129e038fabdacc1cd9fa.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eb0b66914142de3e6b2ed949f87096de', 'MD5', '', '', '2013-07-31 15:29:46.774', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14472', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco3-e2fab857d20b994edb1ad65069407423.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '14b343527abc4892fb3b7e50b0b4b096', 'MD5', '', '', '2013-07-31 17:39:09.264', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14514', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco3-f6fcf091959497c2a77967b732d0e631.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'de2c9e3c4a700e3816d4140b8319cce0', 'MD5', '', '', '2013-07-31 17:39:11.085', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '13424', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', '', '', '2013-07-31 17:41:34.387', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-261585355b62129e038fabdacc1cd9fa.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eb0b66914142de3e6b2ed949f87096de', 'MD5', '', '', '2013-07-31 17:41:36.253', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14472', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-e2fab857d20b994edb1ad65069407423.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '14b343527abc4892fb3b7e50b0b4b096', 'MD5', '', '', '2013-07-31 17:41:38.243', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14514', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-f6fcf091959497c2a77967b732d0e631.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'de2c9e3c4a700e3816d4140b8319cce0', 'MD5', '', '', '2013-07-31 17:41:40.2', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '13424', false, false, -1, NULL, NULL); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-774d0eb40bb051046a5469be7d912d30.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '1842c6ce6c398afe62f15a01063b39a9', 'MD5', '', '', '2013-07-31 17:41:42.331', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '17211', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: sysMetaStatusList statement is: prep2: SELECT guid, serial_version, date_modified, archived FROM systemmetadata ORDER BY guid; [org.dataone.cn.dao.SystemMetadataDaoMetacatImpl]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO identifier VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', '6f632bd1cc2772bdcc43bafdbb9d8669.1', 1);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', 'urn:node:testSource', 'urn:node:testSource', '2013-07-31 15:29:44.429', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, 1, '6f632bd1cc2772bdcc43bafdbb9d8669.1.0', '6f632bd1cc2772bdcc43bafdbb9d8669.1.2');] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO xml_access VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, 'public', 4, 'allow', 'allowFirst', NULL, NULL, NULL, NULL, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO xml_access VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, 'testSubject', 7, 'allow', 'allowFirst', NULL, NULL, NULL, NULL, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationpolicy VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', 'urn:node:testNode2', 'preferred');] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationpolicy VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', 'urn:node:testNode4', 'preferred');] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationpolicy VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', 'urn:node:testNode3', 'blocked');] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1','urn:node:testNode2','COMPLETED','2013-08-05 16:40:00.000');] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1','urn:node:testNode4','QUEUED','2013-08-05 16:25:00.000');] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.Identifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_23()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testGetSystemMetadata(SystemMetadataDaoMetacatImplTest.java:90)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [testId]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [testId]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noise.1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noise.1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noise.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noise.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [foo]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [foo]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.ObjectFormatIdentifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_59()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_109()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:114)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.ObjectFormatIdentifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_59()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_109()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:114)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.ObjectFormatIdentifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_59()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_109()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:114)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.ObjectFormatIdentifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_59()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_109()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:114)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [testCompPid]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [testCompPid]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noisePid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noisePid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noisePid.2]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noisePid.2]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noisePid.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noisePid.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.Identifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_23()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:138)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.Identifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_23()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:138)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.Identifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_23()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:138)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.Identifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_23()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:138)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [testCompPid]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [testCompPid]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noisePid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noisePid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noisePid.2]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noisePid.2]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noisePid.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noisePid.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [simple.test-id]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [simple.test-id]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noise.99]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noise.99]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noise.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [noise.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [foo]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Creating new transaction with name [foo]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.Identifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_23()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.Identifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_23()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.Identifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_23()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.Identifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_23()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.ObjectFormatIdentifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_59()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_109()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.ObjectFormatIdentifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_59()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_109()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.ObjectFormatIdentifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_59()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_109()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:34: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:34: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.ObjectFormatIdentifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_59()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_109()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Creating new transaction with name [pid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Creating new transaction with name [pid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.Identifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_23()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.saveSystemMetadata(SystemMetadataDaoMetacatImpl.java:364)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testUniquePidConstraint(SystemMetadataDaoMetacatImplTest.java:180)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Creating new transaction with name [pid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 4 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 3 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 2 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
java.io.IOException: Null value writing text content from object org.dataone.service.types.v1.Identifier
at org.jibx.runtime.impl.MarshallingContext.writeContent(MarshallingContext.java:818)
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_23()
at org.dataone.service.JiBX_bindingMungeAdapter.JiBX_binding_marshal_1_128()
at org.dataone.service.JiBX_bindingSystemMetadata_access1.marshal()
at org.dataone.service.types.v2.SystemMetadata.marshal(SystemMetadata.java)
at org.jibx.runtime.impl.MarshallingContext.marshalRoot(MarshallingContext.java:1021)
at org.jibx.runtime.impl.MarshallingContext.marshalDocument(MarshallingContext.java:1041)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:95)
at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:74)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1305)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1141)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92)
at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1)
at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662)
at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:308)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127)
at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testUniquePidConstraint(SystemMetadataDaoMetacatImplTest.java:184)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:44)
at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15)
at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:41)
at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20)
at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28)
at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:31)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:76)
at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:50)
at org.junit.runners.ParentRunner$3.run(ParentRunner.java:193)
at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:52)
at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:191)
at org.junit.runners.ParentRunner.access$000(ParentRunner.java:42)
at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:184)
at org.junit.runners.ParentRunner.run(ParentRunner.java:236)
at org.apache.maven.surefire.junit4.JUnit4TestSet.execute(JUnit4TestSet.java:53)
at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:123)
at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:104)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:164)
at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:110)
at org.apache.maven.surefire.booter.SurefireStarter.invokeProvider(SurefireStarter.java:175)
at org.apache.maven.surefire.booter.SurefireStarter.runSuitesInProcessWhenForked(SurefireStarter.java:107)
at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:68)
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('891f20463b023bef25758cabee18b460.1.1', NULL, '1', '2013-08-01 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'c3450ab5803151f78e9e8f91f30f285a', 'MD5', '', '', '2013-08-01 10:17:42.117', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.1.0', '7482', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', '', '', '2013-07-31 15:29:44.429', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('261585355b62129e038fabdacc1cd9fa.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eb0b66914142de3e6b2ed949f87096de', 'MD5', '', '', '2013-07-31 15:29:46.774', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14472', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco3-e2fab857d20b994edb1ad65069407423.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '14b343527abc4892fb3b7e50b0b4b096', 'MD5', '', '', '2013-07-31 17:39:09.264', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14514', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco3-f6fcf091959497c2a77967b732d0e631.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'de2c9e3c4a700e3816d4140b8319cce0', 'MD5', '', '', '2013-07-31 17:39:11.085', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '13424', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', '', '', '2013-07-31 17:41:34.387', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-261585355b62129e038fabdacc1cd9fa.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eb0b66914142de3e6b2ed949f87096de', 'MD5', '', '', '2013-07-31 17:41:36.253', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14472', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-e2fab857d20b994edb1ad65069407423.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '14b343527abc4892fb3b7e50b0b4b096', 'MD5', '', '', '2013-07-31 17:41:38.243', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14514', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-f6fcf091959497c2a77967b732d0e631.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'de2c9e3c4a700e3816d4140b8319cce0', 'MD5', '', '', '2013-07-31 17:41:40.2', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '13424', false, false, -1, NULL, NULL); ] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-774d0eb40bb051046a5469be7d912d30.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '1842c6ce6c398afe62f15a01063b39a9', 'MD5', '', '', '2013-07-31 17:41:42.331', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '17211', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.375 sec
Running org.dataone.cn.dao.ReplicationDaoMetacatImplTest
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','cnDev','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','COMPLETED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getCompletedMemberNodeReplicas statement is: prep261: SELECT DISTINCT guid, date_verified FROM smreplicationstatus WHERE date_verified <= ? AND status = 'COMPLETED' AND member_node <> 'cnDev' ORDER BY date_verified ASC ; {1: TIMESTAMP '2016-06-10 20:37:35.174'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','cnDev','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','COMPLETED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getCompletedCoordinatingNodeReplicas statement is: prep262: SELECT DISTINCT guid, date_verified FROM smreplicationstatus WHERE date_verified <= ? AND status = 'COMPLETED' AND member_node = 'cnDev' ORDER BY date_verified ASC; {1: TIMESTAMP '2016-06-10 20:37:35.185'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','QUEUED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Getting current pending replicas by node. [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getPendingReplicasbyNode statement is: prep263: SELECT member_node, count(status) AS count FROM smreplicationstatus WHERE status = 'REQUESTED' OR status = 'QUEUED' GROUP BY member_node ORDER BY member_node; [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Pending replicas by node result size is 2 [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Pending replica map by node: [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Node: mn:test:2, count: 1 [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Node: mn:test:1, count: 2 [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','QUEUED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Getting recently failed replicas by node. [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Calendar date is: 2016-06-10 20:37:35 [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Cutoff date is: 2016-06-10 19:37:35.205 [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: getRecentFailedReplicas statement is: prep264: SELECT member_node, count(status) AS count FROM smreplicationstatus WHERE status = 'FAILED' AND date_verified >= ? GROUP BY member_node ORDER BY member_node; {1: TIMESTAMP '2016-06-10 19:37:35.205'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Failed replicas by node result size is 0 [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Recent failed replica map by node: [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Getting recently completed replicas by node. [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Calendar date is: 2016-06-10 20:37:35 [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Cutoff date is: 2016-06-10 19:37:35.214 [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: getRecentCompletedReplicas statement is: prep265: SELECT member_node, count(status) AS count FROM smreplicationstatus WHERE status = 'COMPLETED' AND date_verified >= ? GROUP BY member_node ORDER BY member_node; {1: TIMESTAMP '2016-06-10 19:37:35.214'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Recent completed replicas by node result size is 0 [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Recent completed replica map by node: [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Getting current entry counts by node status. [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getCountsByNodeStatus statement is: prep266: SELECT member_node, status, count(status) AS count FROM smreplicationstatus GROUP BY member_node, status ORDER BY member_node, status; [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Counts by node-status result size is 3 [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getRequestedReplicasByDate statement is: prep267: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE date_verified <= ? AND status = 'REQUESTED' ORDER BY date_verified ASC; {1: TIMESTAMP '2016-06-10 20:37:35.229'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getRequestedReplicasByDate statement is: prep268: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'REQUESTED'; {1: 'mn:test:1'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getMemberNodesWithQueuedReplica statement is: prep269: SELECT DISTINCT member_node FROM smreplicationstatus WHERE status='QUEUED'; [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid7','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:3','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:4','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:4','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getQueuedReplicaCountByNode statement is: prep270: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:33'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getQueuedReplicaCountByNode statement is: prep271: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:1'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getQueuedReplicaCountByNode statement is: prep272: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:2'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getQueuedReplicaCountByNode statement is: prep273: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:3'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getQueuedReplicaCountByNode statement is: prep274: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:4'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid7','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:3','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:4','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:4','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getQueuedReplicasByDate statement is: prep275: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED' ORDER BY date_verified ASC; {1: 'mn:test:1'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getQueuedReplicasByDate statement is: prep276: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED' ORDER BY date_verified ASC; {1: 'mn:test:2'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getQueuedReplicasByDate statement is: prep277: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED' ORDER BY date_verified ASC; {1: 'mn:test:3'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getQueuedReplicasByDate statement is: prep278: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED' ORDER BY date_verified ASC; {1: 'mn:test:4'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid7','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:3','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getQueuedReplicasByDate statement is: prep279: SELECT count(*) FROM smreplicationstatus WHERE guid = ? AND member_node = ? AND status = 'QUEUED' {1: 'nosuch', 2: 'mn:test:2'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getQueuedReplicasByDate statement is: prep280: SELECT count(*) FROM smreplicationstatus WHERE guid = ? AND member_node = ? AND status = 'QUEUED' {1: 'test_guid3', 2: 'mn:test:2'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: getQueuedReplicasByDate statement is: prep281: SELECT count(*) FROM smreplicationstatus WHERE guid = ? AND member_node = ? AND status = 'QUEUED' {1: 'test_guid4', 2: 'mn:test:3'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate]
20160610-20:37:35: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
20160610-20:37:35: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils]
Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.137 sec
Running org.dataone.cn.log.MetricLogEntryTest
{"event":"synchronization queued","threadName":"main","threadId":1,"dateLogged":"2016-06-10T20:37:35.300+00:00"}
20160610-20:37:35: [INFO]: {"event":"synchronization queued","threadName":"main","threadId":1,"dateLogged":"2016-06-10T20:37:35.300+00:00"} [org.dataone.cn.log.MetricLogEntryTest]
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 sec
Results :
Tests run: 36, Failures: 0, Errors: 0, Skipped: 0
[JENKINS] Recording test results
[INFO]
[INFO] --- maven-jar-plugin:2.2:jar (default-jar) @ d1_cn_common ---
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[INFO]
[INFO] --- maven-jar-plugin:2.2:test-jar (default) @ d1_cn_common ---
[INFO] Building jar: /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/target/d1_cn_common-2.2.0-tests.jar
[INFO]
[INFO] --- maven-install-plugin:2.3:install (default-install) @ d1_cn_common ---
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[INFO] Installing /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/pom.xml to /var/lib/jenkins/.m2/repository/org/dataone/d1_cn_common/2.2.0/d1_cn_common-2.2.0.pom
[INFO] Installing /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/target/d1_cn_common-2.2.0-tests.jar to /var/lib/jenkins/.m2/repository/org/dataone/d1_cn_common/2.2.0/d1_cn_common-2.2.0-tests.jar
[INFO]
[INFO] --- buildnumber-maven-plugin:1.2:create (default) @ d1_cn_common ---
[INFO] Checking for local modifications: skipped.
[INFO] Updating project files from SCM: skipped.
[INFO] Executing: /bin/sh -c cd /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common && svn --non-interactive info
[INFO] Working directory: /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common
[INFO] Storing buildNumber: 18144 at timestamp: 1465591058382
[INFO] Executing: /bin/sh -c cd /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common && svn --non-interactive info
[INFO] Working directory: /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common
[INFO] Storing buildScmBranch: branches/D1_CN_COMMON_v2.2
[WARNING] Failed to getClass for org.apache.maven.plugin.javadoc.JavadocReport
[INFO]
[INFO] --- maven-javadoc-plugin:2.9.1:javadoc (default-cli) @ d1_cn_common ---
[INFO]
Loading source files for package org.dataone.cn.batch.exceptions...
Loading source files for package org.dataone.cn...
Loading source files for package org.dataone.cn.hazelcast...
Loading source files for package org.dataone.cn.hazelcast.membership...
Loading source files for package org.dataone.cn.servlet.http...
Loading source files for package org.dataone.cn.model.repository...
Loading source files for package org.dataone.cn.synchronization.types...
Loading source files for package org.dataone.cn.ldap...
Loading source files for package org.dataone.cn.dao.exceptions...
Loading source files for package org.dataone.cn.dao...
Loading source files for package org.dataone.cn.log...
Constructing Javadoc information...
Standard Doclet version 1.7.0_101
Building tree for all the packages and classes...
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30 warnings
[WARNING] Javadoc Warnings
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[WARNING] /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see:illegal character: "58" in "http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters"
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[WARNING] /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:302: warning - @param argument "dn:" is not a parameter name.
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[WARNING] /var/lib/jenkins/jobs/d1_cn_common_beta/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:1342: warning - @return tag has no arguments.
[JENKINS] Archiving javadoc
Notifying upstream projects of job completion
Join notifier requires a CauseAction
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
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[INFO] Total time: 40.742s
[INFO] Finished at: Fri Jun 10 20:37:45 UTC 2016
[INFO] Final Memory: 56M/534M
[INFO] ------------------------------------------------------------------------
Waiting for Jenkins to finish collecting data
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