Started by an SCM change Building in workspace /var/lib/jenkins/jobs/d1_cn_common/workspace Cleaning local Directory d1_cn_common Checking out https://repository.dataone.org/software/cicore/trunk/cn/d1_cn_common at revision '2019-06-14T23:52:30.878 +0000' A pom.xml A src A src/main A src/main/java A src/main/java/org A src/main/java/org/dataone A src/main/java/org/dataone/cn A src/main/java/org/dataone/cn/model A src/main/java/org/dataone/cn/model/repository A src/main/java/org/dataone/cn/model/repository/D1BaseJpaRepositoryConfiguration.java A src/main/java/org/dataone/cn/model/repository/PostgresRepositoryConfiguration.java A src/main/java/org/dataone/cn/model/repository/H2RepositoryConfiguration.java A src/main/java/org/dataone/cn/log A src/main/java/org/dataone/cn/log/AuditLogClientSolrImpl.java A src/main/java/org/dataone/cn/log/MetricEvent.java A src/main/java/org/dataone/cn/log/MetricLogEntry.java A src/main/java/org/dataone/cn/log/MetricLogClient.java A src/main/java/org/dataone/cn/log/MetricLogClientFactory.java A src/main/java/org/dataone/cn/log/MetricLogClientLog4JImpl.java A src/main/java/org/dataone/cn/log/AuditLogClientFactory.java A src/main/java/org/dataone/cn/log/AuditLogQueryClientNullObjectImpl.java A src/main/java/org/dataone/cn/log/AuditLogWriteClientSplunkImpl.java A src/main/java/org/dataone/cn/log/AuditLogWriteClient.java A src/main/java/org/dataone/cn/log/AuditLogClientSplunkImpl.java A src/main/java/org/dataone/cn/log/AuditLogClient.java A src/main/java/org/dataone/cn/log/AuditLogEntry.java A src/main/java/org/dataone/cn/log/AuditLogQueryClient.java A src/main/java/org/dataone/cn/log/AuditEvent.java A src/main/java/org/dataone/cn/dao A src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java A src/main/java/org/dataone/cn/dao/ReplicationDaoMetacatImpl.java A src/main/java/org/dataone/cn/dao/MetacatDataSourceFactory.java A src/main/java/org/dataone/cn/dao/SystemMetadataDao.java A src/main/java/org/dataone/cn/dao/ReplicationPolicyEntry.java A src/main/java/org/dataone/cn/dao/DaoFactory.java A src/main/java/org/dataone/cn/dao/SystemMetadataStatus.java A src/main/java/org/dataone/cn/dao/ReplicationDao.java A src/main/java/org/dataone/cn/dao/exceptions A src/main/java/org/dataone/cn/dao/exceptions/DataAccessException.java A src/main/java/org/dataone/cn/servlet A src/main/java/org/dataone/cn/servlet/http A src/main/java/org/dataone/cn/servlet/http/BufferedServletOutputStream.java A src/main/java/org/dataone/cn/servlet/http/ProxyServletRequestWrapper.java A src/main/java/org/dataone/cn/servlet/http/ParameterKeys.java A src/main/java/org/dataone/cn/servlet/http/BufferedServletResponseWrapper.java A src/main/java/org/dataone/cn/ldap A src/main/java/org/dataone/cn/ldap/LDAPService.java A src/main/java/org/dataone/cn/ldap/DirContextPooledObjectFactory.java A src/main/java/org/dataone/cn/ldap/DirContextProvider.java A src/main/java/org/dataone/cn/ldap/D1UnsolicitedNotificationListener.java A src/main/java/org/dataone/cn/ldap/DirContextUnsolicitedNotificationListener.java A src/main/java/org/dataone/cn/ComponentActivationUtility.java A src/main/java/org/dataone/cn/synchronization A src/main/java/org/dataone/cn/synchronization/types A src/main/java/org/dataone/cn/synchronization/types/SyncObject.java A src/main/java/org/dataone/cn/hazelcast A src/main/java/org/dataone/cn/hazelcast/HazelcastClientFactory.java A src/main/java/org/dataone/cn/hazelcast/membership A src/main/java/org/dataone/cn/hazelcast/membership/BaseHazelcastMembershipListener.java A src/main/java/org/dataone/cn/hazelcast/membership/ClusterPartitionMonitor.java A src/main/java/org/dataone/cn/hazelcast/membership/ClusterPartitionMembershipListener.java A src/main/java/org/dataone/cn/hazelcast/HazelcastConfigLocationFactory.java A src/main/java/org/dataone/cn/hazelcast/HazelcastInstanceFactory.java A src/main/java/org/dataone/cn/hazelcast/ClientConfiguration.java A src/main/java/org/dataone/cn/hazelcast/HazelcastClientInstance.java A src/main/java/org/dataone/cn/batch A src/main/java/org/dataone/cn/batch/exceptions A src/main/java/org/dataone/cn/batch/exceptions/ExecutionDisabledException.java A src/main/resources A src/main/resources/buildInfo A src/main/resources/buildInfo/buildInfo.properties A src/test A src/test/java A src/test/java/org A src/test/java/org/dataone A src/test/java/org/dataone/cn A src/test/java/org/dataone/cn/servlet A src/test/java/org/dataone/cn/servlet/http A src/test/java/org/dataone/cn/servlet/http/ProxyServletRequestWrapperTestCase.java A src/test/java/org/dataone/cn/dao A src/test/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImplTestUtil.java A src/test/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImplTest.java A src/test/java/org/dataone/cn/dao/ReplicationDaoMetacatImplTest.java A src/test/java/org/dataone/cn/dao/ReplicationDaoMetacatImplTestUtil.java A src/test/java/org/dataone/cn/log A src/test/java/org/dataone/cn/log/MetricLogEntryTest.java A src/test/java/org/dataone/cn/ldap A src/test/java/org/dataone/cn/ldap/DirContextPooledObjectFactoryTestUnit.java A src/test/java/org/dataone/cn/ldap/DirContextProviderTestUnit.java A src/test/java/org/dataone/cn/ldap/LDAPServiceSuiteTest.java A src/test/java/org/dataone/cn/ldap/LdapServiceTestUnit.java A src/test/java/org/dataone/cn/ldap/MockLDAPService.java A src/test/java/org/dataone/cn/hazelcast A src/test/resources A src/test/resources/log4j.properties A src/test/resources/org A src/test/resources/org/dataone A src/test/resources/org/dataone/configuration A src/test/resources/org/dataone/configuration/config.xml A src/test/resources/org/dataone/configuration/test-ldap.properties A src/test/resources/org/dataone/configuration/test-jdbc.properties A src/test/resources/commons-logging.properties A dependency.tree U . At revision 19744 Parsing POMs Established TCP socket on 36665 [d1_cn_common] $ java -cp /var/lib/jenkins/plugins/maven-plugin/WEB-INF/lib/maven35-agent-1.12.jar:/usr/share/maven/boot/plexus-classworlds-2.x.jar:/usr/share/maven/conf/logging jenkins.maven3.agent.Maven35Main /usr/share/maven /var/cache/jenkins/war/WEB-INF/lib/remoting-3.29.jar /var/lib/jenkins/plugins/maven-plugin/WEB-INF/lib/maven35-interceptor-1.12.jar /var/lib/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-commons-1.12.jar 36665 <===[JENKINS REMOTING CAPACITY]===>channel started Executing Maven: -B -f /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/pom.xml clean install javadoc:javadoc [INFO] Scanning for projects... [WARNING] [WARNING] Some problems were encountered while building the effective model for org.dataone:d1_cn_common:jar:2.4.0-SNAPSHOT [WARNING] 'build.plugins.plugin.version' for com.mycila.maven-license-plugin:maven-license-plugin is missing. @ line 269, column 21 [WARNING] 'build.plugins.plugin.version' for org.apache.maven.plugins:maven-compiler-plugin is missing. @ line 223, column 21 [WARNING] 'build.plugins.plugin.version' for org.codehaus.mojo:buildnumber-maven-plugin is missing. @ line 231, column 21 [WARNING] 'build.plugins.plugin.version' for org.apache.felix:maven-bundle-plugin is missing. @ line 276, column 21 [WARNING] [WARNING] It is highly recommended to fix these problems because they threaten the stability of your build. [WARNING] [WARNING] For this reason, future Maven versions might no longer support building such malformed projects. [WARNING] [INFO] [INFO] ----------------------< org.dataone:d1_cn_common >---------------------- [INFO] Building DataONE_Cn_Common 2.4.0-SNAPSHOT [INFO] --------------------------------[ jar ]--------------------------------- [INFO] [INFO] --- maven-clean-plugin:2.5:clean (default-clean) @ d1_cn_common --- [INFO] [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ d1_cn_common --- [INFO] Executing: /bin/sh -c cd '/var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common' && 'svn' '--non-interactive' 'info' [INFO] Working directory: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common [INFO] Storing buildNumber: null at timestamp: 1560556356626 [INFO] Executing: /bin/sh -c cd '/var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common' && 'svn' '--non-interactive' 'info' [INFO] Working directory: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common [INFO] Storing buildScmBranch: UNKNOWN_BRANCH [INFO] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ d1_cn_common --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 1 resource [INFO] Copying 1 resource [INFO] [INFO] --- maven-compiler-plugin:3.1:compile (default-compile) @ d1_cn_common --- [INFO] Changes detected - recompiling the module! [INFO] Compiling 47 source files to /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/classes [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/DirContextPooledObjectFactory.java: Some input files use or override a deprecated API. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/DirContextPooledObjectFactory.java: Recompile with -Xlint:deprecation for details. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/servlet/http/ProxyServletRequestWrapper.java: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/servlet/http/ProxyServletRequestWrapper.java uses unchecked or unsafe operations. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/servlet/http/ProxyServletRequestWrapper.java: Recompile with -Xlint:unchecked for details. [INFO] [INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ d1_cn_common --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 5 resources [INFO] [INFO] --- maven-compiler-plugin:3.1:testCompile (default-testCompile) @ d1_cn_common --- [INFO] Changes detected - recompiling the module! [INFO] Compiling 11 source files to /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/test-classes [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/test/java/org/dataone/cn/servlet/http/ProxyServletRequestWrapperTestCase.java: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/test/java/org/dataone/cn/servlet/http/ProxyServletRequestWrapperTestCase.java uses unchecked or unsafe operations. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/test/java/org/dataone/cn/servlet/http/ProxyServletRequestWrapperTestCase.java: Recompile with -Xlint:unchecked for details. [INFO] [INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ d1_cn_common --- [INFO] Surefire report directory: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/surefire-reports ------------------------------------------------------- T E S T S ------------------------------------------------------- Running org.dataone.cn.ldap.LDAPServiceSuiteTest 20190614-23:52:40: [WARN]: ApacheDS shutdown hook has NOT been registered with the runtime. This default setting for standalone operation has been overriden. [org.apache.directory.server.core.DefaultDirectoryService] 20190614-23:52:41: [WARN]: You didn't change the admin password of directory service instance 'org'. Please update the admin password as soon as possible to prevent a possible security breach. [org.apache.directory.server.core.DefaultDirectoryService] 20190614-23:52:42: [DEBUG]: Using partition factory JdbmPartitionFactory [org.dataone.test.apache.directory.server.integ.ApacheDSSuiteRunner] 20190614-23:52:42: [DEBUG]: ClassLoader type: AppClassLoader [org.dataone.configuration.Settings] 20190614-23:52:42: [DEBUG]: TestSettings not found: assume production context [org.dataone.configuration.Settings] 20190614-23:52:42: [DEBUG]: Loading configuration: file:/var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/config.xml [org.dataone.configuration.Settings] 20190614-23:52:42: [DEBUG]: Creating configuration null with name null [org.apache.commons.configuration.DefaultConfigurationBuilder] 20190614-23:52:42: [DEBUG]: Base path set to file:///var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/ [org.apache.commons.configuration.PropertiesConfiguration] 20190614-23:52:42: [DEBUG]: Setting default value: false [org.apache.commons.beanutils.converters.BooleanConverter] 20190614-23:52:42: [DEBUG]: Converting 'Boolean' value 'false' to type 'Boolean' [org.apache.commons.beanutils.converters.BooleanConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Boolean [org.apache.commons.beanutils.converters.BooleanConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.ByteConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer' value '0' to type 'Byte' [org.apache.commons.beanutils.converters.ByteConverter] 20190614-23:52:42: [DEBUG]: Converted to Byte value '0' [org.apache.commons.beanutils.converters.ByteConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [org.apache.commons.beanutils.converters.CharacterConverter] 20190614-23:52:42: [DEBUG]: Converting 'Character' value ' ' to type 'Character' [org.apache.commons.beanutils.converters.CharacterConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Character [org.apache.commons.beanutils.converters.CharacterConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.DoubleConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer' value '0' to type 'Double' [org.apache.commons.beanutils.converters.DoubleConverter] 20190614-23:52:42: [DEBUG]: Converted to Double value '0.0' [org.apache.commons.beanutils.converters.DoubleConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.FloatConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer' value '0' to type 'Float' [org.apache.commons.beanutils.converters.FloatConverter] 20190614-23:52:42: [DEBUG]: Converted to Float value '0.0' [org.apache.commons.beanutils.converters.FloatConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.IntegerConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer' value '0' to type 'Integer' [org.apache.commons.beanutils.converters.IntegerConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Integer [org.apache.commons.beanutils.converters.IntegerConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.LongConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer' value '0' to type 'Long' [org.apache.commons.beanutils.converters.LongConverter] 20190614-23:52:42: [DEBUG]: Converted to Long value '0' [org.apache.commons.beanutils.converters.LongConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.ShortConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer' value '0' to type 'Short' [org.apache.commons.beanutils.converters.ShortConverter] 20190614-23:52:42: [DEBUG]: Converted to Short value '0' [org.apache.commons.beanutils.converters.ShortConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0.0 [org.apache.commons.beanutils.converters.BigDecimalConverter] 20190614-23:52:42: [DEBUG]: Converting 'BigDecimal' value '0.0' to type 'BigDecimal' [org.apache.commons.beanutils.converters.BigDecimalConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a BigDecimal [org.apache.commons.beanutils.converters.BigDecimalConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.BigIntegerConverter] 20190614-23:52:42: [DEBUG]: Converting 'BigInteger' value '0' to type 'BigInteger' [org.apache.commons.beanutils.converters.BigIntegerConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a BigInteger [org.apache.commons.beanutils.converters.BigIntegerConverter] 20190614-23:52:42: [DEBUG]: Setting default value: false [org.apache.commons.beanutils.converters.BooleanConverter] 20190614-23:52:42: [DEBUG]: Converting 'Boolean' value 'false' to type 'Boolean' [org.apache.commons.beanutils.converters.BooleanConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Boolean [org.apache.commons.beanutils.converters.BooleanConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.ByteConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer' value '0' to type 'Byte' [org.apache.commons.beanutils.converters.ByteConverter] 20190614-23:52:42: [DEBUG]: Converted to Byte value '0' [org.apache.commons.beanutils.converters.ByteConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [org.apache.commons.beanutils.converters.CharacterConverter] 20190614-23:52:42: [DEBUG]: Converting 'Character' value ' ' to type 'Character' [org.apache.commons.beanutils.converters.CharacterConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Character [org.apache.commons.beanutils.converters.CharacterConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.DoubleConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer' value '0' to type 'Double' [org.apache.commons.beanutils.converters.DoubleConverter] 20190614-23:52:42: [DEBUG]: Converted to Double value '0.0' [org.apache.commons.beanutils.converters.DoubleConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.FloatConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer' value '0' to type 'Float' [org.apache.commons.beanutils.converters.FloatConverter] 20190614-23:52:42: [DEBUG]: Converted to Float value '0.0' [org.apache.commons.beanutils.converters.FloatConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.IntegerConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer' value '0' to type 'Integer' [org.apache.commons.beanutils.converters.IntegerConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Integer [org.apache.commons.beanutils.converters.IntegerConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.LongConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer' value '0' to type 'Long' [org.apache.commons.beanutils.converters.LongConverter] 20190614-23:52:42: [DEBUG]: Converted to Long value '0' [org.apache.commons.beanutils.converters.LongConverter] 20190614-23:52:42: [DEBUG]: Setting default value: 0 [org.apache.commons.beanutils.converters.ShortConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer' value '0' to type 'Short' [org.apache.commons.beanutils.converters.ShortConverter] 20190614-23:52:42: [DEBUG]: Converted to Short value '0' [org.apache.commons.beanutils.converters.ShortConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [org.apache.commons.beanutils.converters.StringConverter] 20190614-23:52:42: [DEBUG]: Converting 'String' value '' to type 'String' [org.apache.commons.beanutils.converters.StringConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Z@1debc91c [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'boolean[]' value '[Z@1debc91c' to type 'boolean[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a boolean[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [B@181e72d3 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'byte[]' value '[B@181e72d3' to type 'byte[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a byte[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [C@6ec7bce0 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'char[]' value '[C@6ec7bce0' to type 'char[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a char[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [D@2d272b0d [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'double[]' value '[D@2d272b0d' to type 'double[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a double[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [F@5c448433 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'float[]' value '[F@5c448433' to type 'float[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a float[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [I@1b5c3e5f [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'int[]' value '[I@1b5c3e5f' to type 'int[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a int[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [J@13741d5a [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'long[]' value '[J@13741d5a' to type 'long[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a long[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [S@5c7668ba [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'short[]' value '[S@5c7668ba' to type 'short[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a short[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.math.BigDecimal;@158f4cfe [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'BigDecimal[]' value '[Ljava.math.BigDecimal;@158f4cfe' to type 'BigDecimal[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a BigDecimal[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.math.BigInteger;@5aaaa446 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'BigInteger[]' value '[Ljava.math.BigInteger;@5aaaa446' to type 'BigInteger[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a BigInteger[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.lang.Boolean;@3e47a03 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'Boolean[]' value '[Ljava.lang.Boolean;@3e47a03' to type 'Boolean[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Boolean[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.lang.Byte;@8deb645 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'Byte[]' value '[Ljava.lang.Byte;@8deb645' to type 'Byte[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Byte[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.lang.Character;@5d425813 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'Character[]' value '[Ljava.lang.Character;@5d425813' to type 'Character[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Character[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.lang.Double;@6a937336 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'Double[]' value '[Ljava.lang.Double;@6a937336' to type 'Double[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Double[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.lang.Float;@684b31de [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'Float[]' value '[Ljava.lang.Float;@684b31de' to type 'Float[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Float[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.lang.Integer;@1a2909ae [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'Integer[]' value '[Ljava.lang.Integer;@1a2909ae' to type 'Integer[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Integer[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.lang.Long;@3f702946 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'Long[]' value '[Ljava.lang.Long;@3f702946' to type 'Long[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Long[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.lang.Short;@1000d54d [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'Short[]' value '[Ljava.lang.Short;@1000d54d' to type 'Short[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Short[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.lang.String;@14b7786 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'String[]' value '[Ljava.lang.String;@14b7786' to type 'String[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a String[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.lang.Class;@63b3ee82 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'Class[]' value '[Ljava.lang.Class;@63b3ee82' to type 'Class[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Class[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.util.Date;@2620e717 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'Date[]' value '[Ljava.util.Date;@2620e717' to type 'Date[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Date[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.util.Calendar;@7636823f [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'Calendar[]' value '[Ljava.util.Calendar;@7636823f' to type 'Calendar[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a Calendar[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.io.File;@2b34e38c [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'java.io.File[]' value '[Ljava.io.File;@2b34e38c' to type 'java.io.File[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a java.io.File[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.sql.Date;@7fd26ad8 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'java.sql.Date[]' value '[Ljava.sql.Date;@7fd26ad8' to type 'java.sql.Date[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a java.sql.Date[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.sql.Time;@14b0e127 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'java.sql.Time[]' value '[Ljava.sql.Time;@14b0e127' to type 'java.sql.Time[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a java.sql.Time[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.sql.Timestamp;@7cea0110 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'java.sql.Timestamp[]' value '[Ljava.sql.Timestamp;@7cea0110' to type 'java.sql.Timestamp[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a java.sql.Timestamp[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Setting default value: [Ljava.net.URL;@5527b211 [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Converting 'java.net.URL[]' value '[Ljava.net.URL;@5527b211' to type 'java.net.URL[]' [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: No conversion required, value is already a java.net.URL[] [org.apache.commons.beanutils.converters.ArrayConverter] 20190614-23:52:42: [DEBUG]: Convert string 'test-jdbc.properties' to class 'java.lang.String' [org.apache.commons.beanutils.ConvertUtils] 20190614-23:52:42: [DEBUG]: Converting 'String' value 'test-jdbc.properties' to type 'String' [org.apache.commons.beanutils.converters.StringConverter] 20190614-23:52:42: [DEBUG]: FileName set to test-jdbc.properties [org.apache.commons.configuration.PropertiesConfiguration] 20190614-23:52:42: [DEBUG]: ConfigurationUtils.locate(): base is file:///var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/, name is test-jdbc.properties [org.apache.commons.configuration.ConfigurationUtils] 20190614-23:52:42: [DEBUG]: Creating configuration null with name null [org.apache.commons.configuration.DefaultConfigurationBuilder] 20190614-23:52:42: [DEBUG]: Base path set to file:///var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/ [org.apache.commons.configuration.PropertiesConfiguration] 20190614-23:52:42: [DEBUG]: Convert string 'test-ldap.properties' to class 'java.lang.String' [org.apache.commons.beanutils.ConvertUtils] 20190614-23:52:42: [DEBUG]: Converting 'String' value 'test-ldap.properties' to type 'String' [org.apache.commons.beanutils.converters.StringConverter] 20190614-23:52:42: [DEBUG]: FileName set to test-ldap.properties [org.apache.commons.configuration.PropertiesConfiguration] 20190614-23:52:42: [DEBUG]: ConfigurationUtils.locate(): base is file:///var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/test-classes/org/dataone/configuration/, name is test-ldap.properties [org.apache.commons.configuration.ConfigurationUtils] 20190614-23:52:42: [DEBUG]: Loading configuration: jar:file:/var/lib/jenkins/.m2/repository/org/dataone/d1_common_java/2.4.0-SNAPSHOT/d1_common_java-2.4.0-SNAPSHOT.jar!/org/dataone/configuration/config.xml [org.dataone.configuration.Settings] 20190614-23:52:42: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20190614-23:52:42: [DEBUG]: Destroying context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20190614-23:52:42: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20190614-23:52:43: [INFO]: Pooled Object Create Date = 2019-52-14 11:52:42.042 Current Time 2019-52-14 11:52:43.043 pooled object idle MS 1000 [org.dataone.cn.ldap.DirContextPooledObjectFactoryTestUnit] 20190614-23:52:43: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20190614-23:52:43: [DEBUG]: Destroying context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20190614-23:52:43: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20190614-23:52:43: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20190614-23:52:43: [DEBUG]: Active Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:43: [DEBUG]: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:43: [DEBUG]: added dirContext #0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:43: [DEBUG]: After Adding: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:43: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:43: [DEBUG]: creating new context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20190614-23:52:43: [DEBUG]: added dirContext #1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:43: [DEBUG]: After Adding: Active Dir Contexts: 2 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:43: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:44: [WARN]: Timeout waiting for idle object [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:44: [DEBUG]: After Exception: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:44: [DEBUG]: After Exception: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:44: [DEBUG]: added dirContext #2 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:44: [DEBUG]: After Adding: Active Dir Contexts: 2 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:44: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:44: [WARN]: Timeout waiting for idle object [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:44: [DEBUG]: After Exception: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:44: [DEBUG]: After Exception: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:44: [DEBUG]: added dirContext #3 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:44: [DEBUG]: After Adding: Active Dir Contexts: 2 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:44: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:45: [WARN]: Timeout waiting for idle object [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:45: [DEBUG]: After Exception: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:45: [DEBUG]: After Exception: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:45: [DEBUG]: added dirContext #4 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:45: [DEBUG]: After Adding: Active Dir Contexts: 2 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:45: [DEBUG]: After Adding: Idle Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:45: [DEBUG]: After Returning: Active Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:45: [DEBUG]: After Returning: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:45: [DEBUG]: Destroying context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20190614-23:52:45: [DEBUG]: After Returning: Active Dir Contexts: 0 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:45: [DEBUG]: After Returning: Idle Dir Contexts: 1 [org.dataone.cn.ldap.DirContextProviderTestUnit] 20190614-23:52:45: [DEBUG]: Added entry DC=test,DC=org [org.dataone.cn.ldap.LDAPService] 20190614-23:52:45: [DEBUG]: Added entry C=GH,DC=test,DC=org [org.dataone.cn.ldap.LDAPService] 20190614-23:52:45: [DEBUG]: Added entry O=Clydestone,C=GH,DC=test,DC=org [org.dataone.cn.ldap.LDAPService] 20190614-23:52:45: [DEBUG]: Added entry OU=Sales,O=Clydestone,C=GH,DC=test,DC=org [org.dataone.cn.ldap.LDAPService] 20190614-23:52:45: [DEBUG]: Removed entry: OU=Sales,O=Clydestone,C=GH,DC=test,DC=org [org.dataone.cn.ldap.LDAPService] 20190614-23:52:45: [DEBUG]: Found matching attribute: d1NodeApproved=* [org.dataone.cn.ldap.LDAPService] 20190614-23:52:45: [DEBUG]: Attribute value: TRUE [org.dataone.cn.ldap.LDAPService] 20190614-23:52:45: [DEBUG]: Found matching attribute: d1NodeApproved=TRUE [org.dataone.cn.ldap.LDAPService] 20190614-23:52:45: [DEBUG]: Shuting down DS for org [org.dataone.test.apache.directory.server.integ.ApacheDSSuiteRunner] 20190614-23:52:45: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20190614-23:52:45: [WARN]: received: javax.naming.ldap.UnsolicitedNotificationEvent[source=com.sun.jndi.ldap.LdapCtx@6da742e]-1.3.6.1.4.1.1466.20036 [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20190614-23:52:45: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20190614-23:52:45: [WARN]: received: javax.naming.ldap.UnsolicitedNotificationEvent[source=com.sun.jndi.ldap.LdapCtx@3ca98713]-1.3.6.1.4.1.1466.20036 [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20190614-23:52:45: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20190614-23:52:45: [WARN]: javax.naming.CommunicationException: Connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20190614-23:52:45: [WARN]: javax.naming.CommunicationException: localhost:12389 connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] 20190614-23:52:45: [WARN]: javax.naming.CommunicationException: Connection closed [org.dataone.cn.ldap.DirContextUnsolicitedNotificationListener] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 6.599 sec Running org.dataone.cn.dao.ReplicationDaoMetacatImplTest 20190614-23:52:45: [DEBUG]: Metacat Data Source JDBC settings: [org.dataone.cn.dao.MetacatDataSourceFactory] 20190614-23:52:45: [DEBUG]: metacat.datasource.url:jdbc:h2:mem:db1 [org.dataone.cn.dao.MetacatDataSourceFactory] 20190614-23:52:45: [DEBUG]: metacat.datasource.driverClass:org.h2.Driver [org.dataone.cn.dao.MetacatDataSourceFactory] 20190614-23:52:45: [DEBUG]: database.user:metacat [org.dataone.cn.dao.MetacatDataSourceFactory] 20190614-23:52:45: [DEBUG]: database.password:metacat [org.dataone.cn.dao.MetacatDataSourceFactory] 20190614-23:52:45: [DEBUG]: metacat.datasource.initialSize:3 [org.dataone.cn.dao.MetacatDataSourceFactory] 20190614-23:52:45: [DEBUG]: metacat.datasource.maxSize:15 [org.dataone.cn.dao.MetacatDataSourceFactory] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [ERROR]: javax.naming.CommunicationException: connection closed [Root exception is java.io.IOException: connection closed]; remaining name 'dc=org' [org.dataone.cn.ldap.DirContextPooledObjectFactory] javax.naming.CommunicationException: connection closed [Root exception is java.io.IOException: connection closed]; remaining name 'dc=org' at com.sun.jndi.ldap.LdapCtx.doSearch(LdapCtx.java:2002) at com.sun.jndi.ldap.LdapCtx.doSearchOnce(LdapCtx.java:1933) at com.sun.jndi.ldap.LdapCtx.c_getAttributes(LdapCtx.java:1325) at com.sun.jndi.toolkit.ctx.ComponentDirContext.p_getAttributes(ComponentDirContext.java:235) at com.sun.jndi.toolkit.ctx.PartialCompositeDirContext.getAttributes(PartialCompositeDirContext.java:141) at com.sun.jndi.toolkit.ctx.PartialCompositeDirContext.getAttributes(PartialCompositeDirContext.java:129) at javax.naming.directory.InitialDirContext.getAttributes(InitialDirContext.java:142) at javax.naming.directory.InitialDirContext.getAttributes(InitialDirContext.java:137) at org.dataone.cn.ldap.DirContextPooledObjectFactory.validateObject(DirContextPooledObjectFactory.java:147) at org.apache.commons.pool2.impl.GenericObjectPool.evict(GenericObjectPool.java:806) at org.apache.commons.pool2.impl.BaseGenericObjectPool$Evictor.run(BaseGenericObjectPool.java:1036) at java.util.TimerThread.mainLoop(Timer.java:555) at java.util.TimerThread.run(Timer.java:505) Caused by: java.io.IOException: connection closed at com.sun.jndi.ldap.LdapClient.ensureOpen(LdapClient.java:1587) at com.sun.jndi.ldap.LdapClient.search(LdapClient.java:524) at com.sun.jndi.ldap.LdapCtx.doSearch(LdapCtx.java:1985) ... 12 more 20190614-23:52:45: [DEBUG]: Destroying context [org.dataone.cn.ldap.DirContextPooledObjectFactory] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid7','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:3','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:4','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:4','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getQueuedReplicaCountByNode statement is: prep2: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:33'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getQueuedReplicaCountByNode statement is: prep3: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:1'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getQueuedReplicaCountByNode statement is: prep4: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:2'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getQueuedReplicaCountByNode statement is: prep5: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:3'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getQueuedReplicaCountByNode statement is: prep6: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED'; {1: 'mn:test:4'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','cnDev','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','COMPLETED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getCompletedCoordinatingNodeReplicas statement is: prep8: SELECT DISTINCT guid, date_verified FROM smreplicationstatus WHERE date_verified <= ? AND status = 'COMPLETED' AND member_node = 'cnDev' ORDER BY date_verified ASC; {1: TIMESTAMP '2019-06-14 23:52:45.67'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Getting recently completed replicas by node. [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Calendar date is: 2019-06-14 23:52:45 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Cutoff date is: 2019-06-14 22:52:45.678 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: getRecentCompletedReplicas statement is: prep9: SELECT member_node, count(status) AS count FROM smreplicationstatus WHERE status = 'COMPLETED' AND date_verified >= ? GROUP BY member_node ORDER BY member_node; {1: TIMESTAMP '2019-06-14 22:52:45.678'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Recent completed replicas by node result size is 0 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Recent completed replica map by node: [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getMemberNodesWithQueuedReplica statement is: prep10: SELECT DISTINCT member_node FROM smreplicationstatus WHERE status='QUEUED'; [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid7','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:1','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid5','mn:test:3','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid6','mn:test:4','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:4','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getQueuedReplicasByDate statement is: prep11: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED' ORDER BY date_verified ASC; {1: 'mn:test:1'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getQueuedReplicasByDate statement is: prep12: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED' ORDER BY date_verified ASC; {1: 'mn:test:2'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getQueuedReplicasByDate statement is: prep13: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED' ORDER BY date_verified ASC; {1: 'mn:test:3'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getQueuedReplicasByDate statement is: prep14: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE member_node = ? AND status = 'QUEUED' ORDER BY date_verified ASC; {1: 'mn:test:4'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid7','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid4','mn:test:3','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getQueuedReplicasByDate statement is: prep15: SELECT count(*) FROM smreplicationstatus WHERE guid = ? AND member_node = ? AND status = 'QUEUED' {1: 'nosuch', 2: 'mn:test:2'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getQueuedReplicasByDate statement is: prep16: SELECT count(*) FROM smreplicationstatus WHERE guid = ? AND member_node = ? AND status = 'QUEUED' {1: 'test_guid3', 2: 'mn:test:2'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getQueuedReplicasByDate statement is: prep17: SELECT count(*) FROM smreplicationstatus WHERE guid = ? AND member_node = ? AND status = 'QUEUED' {1: 'test_guid4', 2: 'mn:test:3'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','QUEUED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Getting current pending replicas by node. [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getPendingReplicasbyNode statement is: prep18: SELECT member_node, count(status) AS count FROM smreplicationstatus WHERE status = 'REQUESTED' OR status = 'QUEUED' GROUP BY member_node ORDER BY member_node; [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Pending replicas by node result size is 2 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Pending replica map by node: [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Node: mn:test:2, count: 1 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Node: mn:test:1, count: 2 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','QUEUED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:2','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Getting recently failed replicas by node. [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Calendar date is: 2019-06-14 23:52:45 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Cutoff date is: 2019-06-14 22:52:45.705 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: getRecentFailedReplicas statement is: prep19: SELECT member_node, count(status) AS count FROM smreplicationstatus WHERE status = 'FAILED' AND date_verified >= ? GROUP BY member_node ORDER BY member_node; {1: TIMESTAMP '2019-06-14 22:52:45.705'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Failed replicas by node result size is 0 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Recent failed replica map by node: [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Getting current entry counts by node status. [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getCountsByNodeStatus statement is: prep20: SELECT member_node, status, count(status) AS count FROM smreplicationstatus GROUP BY member_node, status ORDER BY member_node, status; [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Counts by node-status result size is 3 [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getRequestedReplicasByDate statement is: prep21: SELECT guid, member_node, status, date_verified FROM smreplicationstatus WHERE date_verified <= ? AND status = 'REQUESTED' ORDER BY date_verified ASC; {1: TIMESTAMP '2019-06-14 23:52:45.713'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','QUEUED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:3','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getRequestedReplicasByDate statement is: prep22: SELECT count(*) FROM smreplicationstatus WHERE member_node = ? AND status = 'REQUESTED'; {1: 'mn:test:1'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus (guid text, member_node varchar(250), status varchar(250), date_verified timestamp)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','mn:test:1','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid','cnDev','COMPLETED',TIMESTAMP '2011-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:1','REQUESTED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid2','mn:test:2','COMPLETED',TIMESTAMP '2012-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('test_guid3','mn:test:1','REQUESTED',TIMESTAMP '2020-01-01 12:00:00')] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: getCompletedMemberNodeReplicas statement is: prep23: SELECT DISTINCT guid, date_verified FROM smreplicationstatus WHERE date_verified <= ? AND status = 'COMPLETED' AND member_node <> 'cnDev' ORDER BY date_verified ASC ; {1: TIMESTAMP '2019-06-14 23:52:45.721'} [org.dataone.cn.dao.ReplicationDaoMetacatImpl] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.229 sec Running org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Creating new transaction with name [pid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Creating new transaction with name [pid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.saveSystemMetadata(SystemMetadataDaoMetacatImpl.java:365) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testUniquePidConstraint(SystemMetadataDaoMetacatImplTest.java:180) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Creating new transaction with name [pid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 4 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 3 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 2 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testUniquePidConstraint(SystemMetadataDaoMetacatImplTest.java:184) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:45: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:45: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [testCompPid]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [testCompPid]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noisePid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noisePid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noisePid.2]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noisePid.2]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noisePid.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noisePid.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [simple.test-id]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [simple.test-id]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noise.99]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noise.99]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noise.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noise.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [foo]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [foo]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 52 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 52 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 52 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleAndComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:168) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 52 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('891f20463b023bef25758cabee18b460.1.1', NULL, '1', '2013-08-01 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'c3450ab5803151f78e9e8f91f30f285a', 'MD5', '', '', '2013-08-01 10:17:42.117', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.1.0', '7482', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', '', '', '2013-07-31 15:29:44.429', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('261585355b62129e038fabdacc1cd9fa.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eb0b66914142de3e6b2ed949f87096de', 'MD5', '', '', '2013-07-31 15:29:46.774', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14472', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco3-e2fab857d20b994edb1ad65069407423.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '14b343527abc4892fb3b7e50b0b4b096', 'MD5', '', '', '2013-07-31 17:39:09.264', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14514', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco3-f6fcf091959497c2a77967b732d0e631.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'de2c9e3c4a700e3816d4140b8319cce0', 'MD5', '', '', '2013-07-31 17:39:11.085', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '13424', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', '', '', '2013-07-31 17:41:34.387', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-261585355b62129e038fabdacc1cd9fa.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eb0b66914142de3e6b2ed949f87096de', 'MD5', '', '', '2013-07-31 17:41:36.253', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14472', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-e2fab857d20b994edb1ad65069407423.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '14b343527abc4892fb3b7e50b0b4b096', 'MD5', '', '', '2013-07-31 17:41:38.243', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14514', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-f6fcf091959497c2a77967b732d0e631.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'de2c9e3c4a700e3816d4140b8319cce0', 'MD5', '', '', '2013-07-31 17:41:40.2', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '13424', false, false, -1, NULL, NULL); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-774d0eb40bb051046a5469be7d912d30.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '1842c6ce6c398afe62f15a01063b39a9', 'MD5', '', '', '2013-07-31 17:41:42.331', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '17211', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('891f20463b023bef25758cabee18b460.1.1', NULL, '1', '2013-08-01 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'c3450ab5803151f78e9e8f91f30f285a', 'MD5', '', '', '2013-08-01 10:17:42.117', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.1.0', '7482', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', '', '', '2013-07-31 15:29:44.429', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('261585355b62129e038fabdacc1cd9fa.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eb0b66914142de3e6b2ed949f87096de', 'MD5', '', '', '2013-07-31 15:29:46.774', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14472', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco3-e2fab857d20b994edb1ad65069407423.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '14b343527abc4892fb3b7e50b0b4b096', 'MD5', '', '', '2013-07-31 17:39:09.264', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14514', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco3-f6fcf091959497c2a77967b732d0e631.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'de2c9e3c4a700e3816d4140b8319cce0', 'MD5', '', '', '2013-07-31 17:39:11.085', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '13424', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', '', '', '2013-07-31 17:41:34.387', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-261585355b62129e038fabdacc1cd9fa.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eb0b66914142de3e6b2ed949f87096de', 'MD5', '', '', '2013-07-31 17:41:36.253', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14472', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-e2fab857d20b994edb1ad65069407423.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '14b343527abc4892fb3b7e50b0b4b096', 'MD5', '', '', '2013-07-31 17:41:38.243', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14514', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-f6fcf091959497c2a77967b732d0e631.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'de2c9e3c4a700e3816d4140b8319cce0', 'MD5', '', '', '2013-07-31 17:41:40.2', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '13424', false, false, -1, NULL, NULL); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('pisco-test-774d0eb40bb051046a5469be7d912d30.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '1842c6ce6c398afe62f15a01063b39a9', 'MD5', '', '', '2013-07-31 17:41:42.331', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '17211', false, false, -1, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: sysMetaStatusList statement is: prep165: SELECT guid, serial_version, date_modified, archived FROM systemmetadata ORDER BY guid; [org.dataone.cn.dao.SystemMetadataDaoMetacatImpl] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO identifier VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', '6f632bd1cc2772bdcc43bafdbb9d8669.1', 1);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO systemmetadata VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, '1', '2013-07-31 17:00:00', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', '709eee7f02ff1f12a9084b906ee0770e', 'MD5', 'urn:node:testSource', 'urn:node:testSource', '2013-07-31 15:29:44.429', 'uid=cjones,o=NCEAS,dc=ecoinformatics,dc=org', 'eml://ecoinformatics.org/eml-2.0.1', '14230', false, false, 1, '6f632bd1cc2772bdcc43bafdbb9d8669.1.0', '6f632bd1cc2772bdcc43bafdbb9d8669.1.2');] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO xml_access VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, 'public', 4, 'allow', 'allowFirst', NULL, NULL, NULL, NULL, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO xml_access VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', NULL, 'testSubject', 7, 'allow', 'allowFirst', NULL, NULL, NULL, NULL, NULL, NULL);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationpolicy VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', 'urn:node:testNode2', 'preferred');] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationpolicy VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', 'urn:node:testNode4', 'preferred');] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationpolicy VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1', 'urn:node:testNode3', 'blocked');] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1','urn:node:testNode2','COMPLETED','2013-08-05 16:40:00.000');] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [INSERT INTO smreplicationstatus VALUES ('6f632bd1cc2772bdcc43bafdbb9d8669.1.1','urn:node:testNode4','QUEUED','2013-08-05 16:25:00.000');] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testGetSystemMetadata(SystemMetadataDaoMetacatImplTest.java:90) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [testId]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [testId]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noise.1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noise.1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noise.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noise.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [foo]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [foo]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:114) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 52 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:114) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 52 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:114) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 52 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testSimpleSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:114) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:336) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.ObjectFormatIdentifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 52 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS identifier ( guid text NOT NULL, docid character varying(250), rev bigint, CONSTRAINT identifier_pk PRIMARY KEY (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS systemmetadata ( guid text NOT NULL, series_id text, serial_version character varying(256), date_uploaded timestamp, rights_holder character varying(250), checksum character varying(512), checksum_algorithm character varying(250), origin_member_node character varying(250), authoritive_member_node character varying(250), date_modified timestamp, submitter character varying(256), object_format character varying(256), size character varying(256), archived boolean, replication_allowed boolean, number_replicas bigint, obsoletes text, obsoleted_by text, CONSTRAINT systemmetadata_pk PRIMARY KEY (guid));] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS xml_access ( guid text, accessfileid text, principal_name character varying(100), permission bigint, perm_type character varying(32), perm_order character varying(32), begin_time date, end_time date, ticket_count bigint, subtreeid character varying(32), startnodeid bigint, endnodeid bigint, CONSTRAINT xml_access_ck CHECK (begin_time < end_time)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationpolicy ( guid text, member_node character varying(250), policy text, CONSTRAINT smreplicationpolicy_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [CREATE TABLE IF NOT EXISTS smreplicationstatus ( guid text, member_node character varying(250), status character varying(250), date_verified timestamp, CONSTRAINT smreplicationstatus_fk FOREIGN KEY (guid) REFERENCES systemmetadata (guid)); ] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [testCompPid]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [testCompPid]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noisePid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noisePid1]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noisePid.2]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noisePid.2]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noisePid.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO systemmetadata (guid) VALUES (?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Creating new transaction with name [noisePid.3]: PROPAGATION_REQUIRED,ISOLATION_READ_COMMITTED [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Acquired Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] for JDBC transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Changing isolation level of JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to 2 [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Switching JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] to manual commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [UPDATE systemmetadata SET series_id = ?, serial_version = ?, date_uploaded = ?, rights_holder = ?, checksum = ?, checksum_algorithm = ?, origin_member_node = ?, authoritive_member_node = ?, date_modified = ?, submitter = ?, object_format = ?, size = ?, archived = ?, replication_allowed = ?, number_replicas = ?, obsoletes = ?, obsoleted_by = ? WHERE guid = ? ;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationpolicy WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationpolicy (guid, member_node, policy) VALUES (?, ?, ?);] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM smreplicationstatus WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO smreplicationstatus (guid, member_node, status, date_verified) VALUES (?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [DELETE FROM xml_access WHERE guid = ?] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 0 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL update [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [INSERT INTO xml_access (guid, principal_name, permission, perm_type, perm_order) VALUES (?, ?, ?, ?, ?)] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: SQL update affected 1 rows [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Initiating transaction commit [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Committing JDBC transaction on Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Releasing JDBC Connection [jdbc:h2:mem:db1, UserName=METACAT, H2 JDBC Driver] after transaction [org.springframework.jdbc.datasource.DataSourceTransactionManager] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL query [SELECT count(guid) FROM systemmetadata] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:138) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:138) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:138) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing prepared SQL query [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Executing prepared SQL statement [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] org.dataone.exceptions.MarshallingException at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:232) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:202) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1315) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl$SystemMetadataMapper.mapRow(SystemMetadataDaoMetacatImpl.java:1143) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:92) at org.springframework.jdbc.core.RowMapperResultSetExtractor.extractData(RowMapperResultSetExtractor.java:1) at org.springframework.jdbc.core.JdbcTemplate$1.doInPreparedStatement(JdbcTemplate.java:649) at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:587) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:637) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:662) at org.springframework.jdbc.core.JdbcTemplate.query(JdbcTemplate.java:702) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:309) at org.dataone.cn.dao.SystemMetadataDaoMetacatImpl.getSystemMetadata(SystemMetadataDaoMetacatImpl.java:127) at org.dataone.cn.dao.SystemMetadataDaoMetacatImplTest.testComplexSaveSystemMetadata(SystemMetadataDaoMetacatImplTest.java:138) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.junit.runners.model.FrameworkMethod$1.runReflectiveCall(FrameworkMethod.java:45) at org.junit.internal.runners.model.ReflectiveCallable.run(ReflectiveCallable.java:15) at org.junit.runners.model.FrameworkMethod.invokeExplosively(FrameworkMethod.java:42) at org.junit.internal.runners.statements.InvokeMethod.evaluate(InvokeMethod.java:20) at org.junit.internal.runners.statements.RunBefores.evaluate(RunBefores.java:28) at org.junit.internal.runners.statements.RunAfters.evaluate(RunAfters.java:30) at org.junit.runners.ParentRunner.runLeaf(ParentRunner.java:263) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:68) at org.junit.runners.BlockJUnit4ClassRunner.runChild(BlockJUnit4ClassRunner.java:47) at org.junit.runners.ParentRunner$3.run(ParentRunner.java:231) at org.junit.runners.ParentRunner$1.schedule(ParentRunner.java:60) at org.junit.runners.ParentRunner.runChildren(ParentRunner.java:229) at org.junit.runners.ParentRunner.access$000(ParentRunner.java:50) at org.junit.runners.ParentRunner$2.evaluate(ParentRunner.java:222) at org.junit.runners.ParentRunner.run(ParentRunner.java:300) at org.apache.maven.surefire.junit4.JUnit4Provider.execute(JUnit4Provider.java:252) at org.apache.maven.surefire.junit4.JUnit4Provider.executeTestSet(JUnit4Provider.java:141) at org.apache.maven.surefire.junit4.JUnit4Provider.invoke(JUnit4Provider.java:112) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.maven.surefire.util.ReflectionUtils.invokeMethodWithArray(ReflectionUtils.java:189) at org.apache.maven.surefire.booter.ProviderFactory$ProviderProxy.invoke(ProviderFactory.java:165) at org.apache.maven.surefire.booter.ProviderFactory.invokeProvider(ProviderFactory.java:85) at org.apache.maven.surefire.booter.ForkedBooter.runSuitesInProcess(ForkedBooter.java:115) at org.apache.maven.surefire.booter.ForkedBooter.main(ForkedBooter.java:75) Caused by: javax.xml.bind.MarshalException - with linked exception: [com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0] at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:311) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.marshal(MarshallerImpl.java:236) at javax.xml.bind.helpers.AbstractMarshallerImpl.marshal(AbstractMarshallerImpl.java:95) at org.dataone.service.util.TypeMarshaller.marshalTypeToOutputStream(TypeMarshaller.java:229) ... 44 more Caused by: com.sun.istack.internal.SAXException2: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:232) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.reportError(XMLSerializer.java:247) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:355) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsSoleContent(XMLSerializer.java:578) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeRoot(ClassBeanInfoImpl.java:326) at com.sun.xml.internal.bind.v2.runtime.XMLSerializer.childAsRoot(XMLSerializer.java:479) at com.sun.xml.internal.bind.v2.runtime.MarshallerImpl.write(MarshallerImpl.java:308) ... 47 more Caused by: com.sun.xml.internal.bind.api.AccessorException: Object must have some value in its @XmlValue field: org.dataone.service.types.v1.Identifier@0 at com.sun.xml.internal.bind.v2.model.impl.RuntimeClassInfoImpl$TransducerImpl.writeLeafElement(RuntimeClassInfoImpl.java:395) at com.sun.xml.internal.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.writeLeafElement(TransducedAccessor.java:239) at com.sun.xml.internal.bind.v2.runtime.property.SingleElementLeafProperty.serializeBody(SingleElementLeafProperty.java:115) at com.sun.xml.internal.bind.v2.runtime.ClassBeanInfoImpl.serializeBody(ClassBeanInfoImpl.java:345) ... 51 more 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationstatus;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS smreplicationpolicy;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS xml_access;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS systemmetadata;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Executing SQL statement [DROP TABLE IF EXISTS identifier;] [org.springframework.jdbc.core.JdbcTemplate] 20190614-23:52:46: [DEBUG]: Fetching JDBC Connection from DataSource [org.springframework.jdbc.datasource.DataSourceUtils] 20190614-23:52:46: [DEBUG]: Returning JDBC Connection to DataSource [org.springframework.jdbc.datasource.DataSourceUtils] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.522 sec Running org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase 20190614-23:52:46: [INFO]: proxy.request RequestURL: http://localhost:80/Mock/object/?fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.request RequestURI: /Mock/object/?fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.request PathInfo: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.request PathTranslated: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.request QueryString: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.request ContextPath: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.request ServletPath: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.request Method: GET [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.request toString:org.springframework.mock.web.MockHttpServletRequest@463561c5 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.request.ParameterMap: fromDate 2012-03-07T22:00:00+00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.wrapper RequestURL: http://localhost:80/Mock/object/?fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.wrapper RequestURI: /Mock/object/?fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.wrapper PathInfo: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.wrapper PathTranslated: null [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.wrapper QueryString: fromDate=2012-03-07T22:00:00%2B00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.wrapper ContextPath: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.wrapper ServletPath: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.wrapper Method: GET [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.wrapper toString: org.dataone.cn.servlet.http.ProxyServletRequestWrapper@659feb22 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: proxy.wrapper.ParameterMap: fromDate 2012-03-07T22:00:00+00:00 [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] 20190614-23:52:46: [INFO]: [org.dataone.cn.servlet.http.ProxyServletRequestWrapperTestCase] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec Running org.dataone.cn.log.MetricLogEntryTest {"event":"synchronization queued","threadName":"main","threadId":1,"dateLogged":"2019-06-14T23:52:46.246+00:00"} 20190614-23:52:46: [INFO]: {"event":"synchronization queued","threadName":"main","threadId":1,"dateLogged":"2019-06-14T23:52:46.246+00:00"} [org.dataone.cn.log.MetricLogEntryTest] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 sec Results : Tests run: 36, Failures: 0, Errors: 0, Skipped: 0 [JENKINS] Recording test results [WARNING] Attempt to (de-)serialize anonymous class hudson.maven.reporters.SurefireArchiver$2; see: https://jenkins.io/redirect/serialization-of-anonymous-classes/ [WARNING] Attempt to (de-)serialize anonymous class hudson.maven.reporters.BuildInfoRecorder$1; see: https://jenkins.io/redirect/serialization-of-anonymous-classes/ [INFO] [INFO] --- maven-jar-plugin:2.2:jar (default-jar) @ d1_cn_common --- [INFO] Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0.7/maven-project-2.0.7.jar [INFO] Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.0.7/maven-profile-2.0.7.jar [INFO] Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0.7/maven-settings-2.0.7.jar [INFO] Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.7/maven-artifact-manager-2.0.7.jar [INFO] Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0.7/maven-model-2.0.7.jar [INFO] Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact-manager/2.0.7/maven-artifact-manager-2.0.7.jar (57 kB at 252 kB/s) [INFO] Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-profile/2.0.7/maven-profile-2.0.7.jar (35 kB at 157 kB/s) [INFO] Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0.7/maven-repository-metadata-2.0.7.jar [INFO] Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-registry/2.0.7/maven-plugin-registry-2.0.7.jar [INFO] Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-model/2.0.7/maven-model-2.0.7.jar (86 kB at 381 kB/s) [INFO] Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.0.7/maven-artifact-2.0.7.jar [INFO] Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-settings/2.0.7/maven-settings-2.0.7.jar (49 kB at 215 kB/s) [INFO] Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-project/2.0.7/maven-project-2.0.7.jar (117 kB at 494 kB/s) [INFO] Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-repository-metadata/2.0.7/maven-repository-metadata-2.0.7.jar (24 kB at 103 kB/s) [INFO] Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-artifact/2.0.7/maven-artifact-2.0.7.jar (88 kB at 369 kB/s) [INFO] Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/maven/maven-plugin-registry/2.0.7/maven-plugin-registry-2.0.7.jar (29 kB at 115 kB/s) [INFO] Building jar: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/d1_cn_common-2.4.0-SNAPSHOT.jar [INFO] [INFO] --- maven-jar-plugin:2.2:test-jar (default) @ d1_cn_common --- [INFO] Building jar: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/d1_cn_common-2.4.0-SNAPSHOT-tests.jar [INFO] [INFO] --- maven-install-plugin:2.4:install (default-install) @ d1_cn_common --- [INFO] Installing /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/d1_cn_common-2.4.0-SNAPSHOT.jar to /var/lib/jenkins/.m2/repository/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-SNAPSHOT.jar [INFO] Installing /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/pom.xml to /var/lib/jenkins/.m2/repository/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-SNAPSHOT.pom [INFO] Installing /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/d1_cn_common-2.4.0-SNAPSHOT-tests.jar to /var/lib/jenkins/.m2/repository/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-SNAPSHOT-tests.jar [INFO] [INFO] >>> maven-javadoc-plugin:2.10.4:javadoc (default-cli) > generate-sources @ d1_cn_common >>> [INFO] [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ d1_cn_common --- [INFO] Executing: /bin/sh -c cd '/var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common' && 'svn' '--non-interactive' 'info' [INFO] Working directory: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common [INFO] Storing buildNumber: null at timestamp: 1560556368814 [INFO] Executing: /bin/sh -c cd '/var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common' && 'svn' '--non-interactive' 'info' [INFO] Working directory: /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common [INFO] Storing buildScmBranch: UNKNOWN_BRANCH [WARNING] Failed to getClass for org.apache.maven.plugin.javadoc.JavadocReport [INFO] [INFO] <<< maven-javadoc-plugin:2.10.4:javadoc (default-cli) < generate-sources @ d1_cn_common <<< [INFO] [INFO] [INFO] --- maven-javadoc-plugin:2.10.4:javadoc (default-cli) @ d1_cn_common --- [INFO] Loading source files for package org.dataone.cn.synchronization.types... Loading source files for package org.dataone.cn.ldap... Loading source files for package org.dataone.cn.model.repository... Loading source files for package org.dataone.cn.log... Loading source files for package org.dataone.cn.hazelcast... Loading source files for package org.dataone.cn.hazelcast.membership... Loading source files for package org.dataone.cn.servlet.http... Loading source files for package org.dataone.cn.batch.exceptions... Loading source files for package org.dataone.cn... Loading source files for package org.dataone.cn.dao... Loading source files for package org.dataone.cn.dao.exceptions... Constructing Javadoc information... Standard Doclet version 1.8.0_212 Building tree for all the packages and classes... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/synchronization/types/SyncObject.html... 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Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/hazelcast/membership/BaseHazelcastMembershipListener.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/hazelcast/membership/ClusterPartitionMembershipListener.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/hazelcast/membership/ClusterPartitionMonitor.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/servlet/http/BufferedServletOutputStream.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/servlet/http/BufferedServletResponseWrapper.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/servlet/http/ParameterKeys.html... 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Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.ReplicationPolicyEntryMapper.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.SystemMetadataMapper.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.SystemMetadataStatusMapper.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/dao/SystemMetadataStatus.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/dao/exceptions/DataAccessException.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/overview-frame.html... 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Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/dao/exceptions/package-use.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/hazelcast/package-use.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/hazelcast/membership/package-use.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/ldap/package-use.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/log/package-use.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/model/repository/package-use.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/servlet/http/package-use.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/org/dataone/cn/synchronization/types/package-use.html... Building index for all the packages and classes... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/overview-tree.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/index-all.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/deprecated-list.html... Building index for all classes... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/allclasses-frame.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/allclasses-noframe.html... Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/index.html... 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Generating /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/site/apidocs/help-doc.html... 30 warnings [WARNING] Javadoc Warnings [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see:illegal character: "58" in "http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters" [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see:illegal character: "47" in "http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters" [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see:illegal character: "47" in "http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters" [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see:illegal character: "47" in "http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters" [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see:illegal character: "47" in "http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters" [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:367: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:80: warning - Tag @see: reference not found: http://www.ietf.org/rfc/rfc2254.txt for considerations on special characters [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:247: warning - @param argument "dn:" is not a parameter name. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:277: warning - @param argument "dn:" is not a parameter name. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/ldap/LDAPService.java:307: warning - @param argument "dn:" is not a parameter name. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/model/repository/D1BaseJpaRepositoryConfiguration.java:24: warning - @Configuration is an unknown tag. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/model/repository/D1BaseJpaRepositoryConfiguration.java:24: warning - @EnableJpaRepositories("repository is an unknown tag. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/model/repository/D1BaseJpaRepositoryConfiguration.java:24: warning - @ComponentScan("model is an unknown tag. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/hazelcast/HazelcastClientFactory.java:103: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/hazelcast/HazelcastClientFactory.java:130: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/hazelcast/HazelcastInstanceFactory.java:44: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/batch/exceptions/ExecutionDisabledException.java:34: warning - @param argument "cause" is not a parameter name. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/batch/exceptions/ExecutionDisabledException.java:41: warning - @param argument "cause" is not a parameter name. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/ReplicationDao.java:89: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDao.java:41: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDao.java:50: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDao.java:65: warning - @param argument "tableMap" is not a parameter name. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:348: warning - Tag @see: can't find saveSystemMetadata(org.dataone.service.types.v1.SystemMetadata) in org.dataone.cn.dao.SystemMetadataDao [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:410: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:640: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:754: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:787: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:815: warning - @return tag has no arguments. [WARNING] /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/src/main/java/org/dataone/cn/dao/SystemMetadataDaoMetacatImpl.java:1352: warning - @return tag has no arguments. [JENKINS] Archiving javadoc Notifying upstream projects of job completion Join notifier requires a CauseAction [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ [INFO] Total time: 16.669 s [INFO] Finished at: 2019-06-14T23:52:51Z [INFO] ------------------------------------------------------------------------ Waiting for Jenkins to finish collecting data [JENKINS] Archiving /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/pom.xml to org.dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-SNAPSHOT.pom [JENKINS] Archiving /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/d1_cn_common-2.4.0-SNAPSHOT.jar to org.dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-SNAPSHOT.jar [JENKINS] Archiving /var/lib/jenkins/jobs/d1_cn_common/workspace/d1_cn_common/target/d1_cn_common-2.4.0-SNAPSHOT-tests.jar to org.dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-SNAPSHOT-tests.jar channel stopped Maven RedeployPublisher use remote maven settings from : /usr/share/maven/conf/settings.xml [ERROR] uniqueVersion == false is not anymore supported in maven 3 [INFO] Deployment in file:///var/www/maven (id=,uniqueVersion=false) Deploying the main artifact d1_cn_common-2.4.0-SNAPSHOT.jar Downloading: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/maven-metadata.xml Downloaded: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/maven-metadata.xml (989 B at 965.8 KB/sec) Uploading: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-20190614.235255-15.jar Uploaded: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-20190614.235255-15.jar (119 KB at 118686.5 KB/sec) Uploading: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-20190614.235255-15.pom Uploaded: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-20190614.235255-15.pom (12 KB) Downloading: file:///var/www/maven/org/dataone/d1_cn_common/maven-metadata.xml Downloaded: file:///var/www/maven/org/dataone/d1_cn_common/maven-metadata.xml (2 KB at 1443.4 KB/sec) Uploading: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/maven-metadata.xml Uploaded: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/maven-metadata.xml (989 B) Uploading: file:///var/www/maven/org/dataone/d1_cn_common/maven-metadata.xml Uploaded: file:///var/www/maven/org/dataone/d1_cn_common/maven-metadata.xml (2 KB at 1443.4 KB/sec) Deploying the main artifact d1_cn_common-2.4.0-SNAPSHOT-tests.jar Uploading: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-20190614.235255-15-tests.jar Uploaded: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/d1_cn_common-2.4.0-20190614.235255-15-tests.jar (36 KB at 35915.0 KB/sec) Uploading: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/maven-metadata.xml Uploaded: file:///var/www/maven/org/dataone/d1_cn_common/2.4.0-SNAPSHOT/maven-metadata.xml (989 B) [INFO] Deployment done in 59 ms Notifying upstream projects of job completion Not triggering d1_cn_index_tool because it has dependencies in the downstream project list Not triggering d1_cn_service because it has dependencies in the downstream project list Not triggering d1_replication_auditor because it has dependencies in the downstream project list Not triggering d1_solr_extensions because it has dependencies in the downstream project list Not triggering d1_synchronization because it has dependencies in the downstream project list Not triggering d1_cn_index_processor because it has dependencies in the downstream project list Not triggering d1_replication because it has dependencies in the downstream project list Not triggering d1_cn_index_generator because it has dependencies in the downstream project list Not triggering d1_cn_noderegistry because it has dependencies in the downstream project list Finished: SUCCESS