<?xml version="1.0"?>
<!--
	*   '$RCSfile$'
	*     Authors: Matt Jones, Chad Berkley, Jivka Bojilova
	*   Copyright: 2000 Regents of the University of California and the
	*              National Center for Ecological Analysis and Synthesis
	* For Details: http://www.nceas.ucsb.edu/
	*
	*    '$Author: tao $'
	*    '$Date: 2016-05-20 22:25:46 +0000 (Fri, 20 May 2016) $'
	*    '$Revision: 9802 $'
	*
	* Build file for the Ant cross-platform build system for metacat
	* See http://jakarta.apache.org for details on Ant
	*
	* usage: ant [compile|jar|install|documentation]
	*
	* This program is free software; you can redistribute it and/or modify
	* it under the terms of the GNU General Public License as published by
	* the Free Software Foundation; either version 2 of the License, or
	* (at your option) any later version.
	*
	* This program is distributed in the hope that it will be useful,
	* but WITHOUT ANY WARRANTY; without even the implied warranty of
	* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
	* GNU General Public License for more details.
	*
	* You should have received a copy of the GNU General Public License
	* along with this program; if not, write to the Free Software
	* Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
-->
<project name="metacat" default="jar" basedir="."
         xmlns:artifact="antlib:org.apache.maven.artifact.ant">
	<property environment="env" />
	<property file="build.properties" /><!-- USER SPECIFIC PROPS -->
	<property name="java.target.version" value="1.7" /> <!-- the target version for java compilation-->
	<property name="java.source.version" value="1.7" /> <!-- the source code version for java compilation-->

    <!-- Configure the maven2 ant tasks -->
    <path id="maven-ant-tasks.classpath" path="lib/maven-ant-tasks-2.1.0.jar" />
    <typedef resource="org/apache/maven/artifact/ant/antlib.xml"
             uri="antlib:org.apache.maven.artifact.ant"
             classpathref="maven-ant-tasks.classpath" />
	
	<!-- defining the axis tasks -->
	<path id="axis.ant.classpath">
		<fileset dir="lib/lsid_lib">
			<include name="*.jar" />
		</fileset>
	</path>
	
	<!-- Allow integration with Git projects -->
	<macrodef name = "git">
	    <attribute name = "command" />
	    <attribute name = "dir" default = "" />
	    <element name = "args" optional = "true" />
	    <sequential>
	        <echo message = "git @{command}" />
	        <exec executable = "git" dir = "@{dir}">
	            <arg value = "@{command}" />
	            <args/>
	        </exec>
	    </sequential>
	</macrodef>
	<macrodef name = "git-clone-pull">
	    <attribute name = "repository" />
	    <attribute name = "dest" />
	    <attribute name = "refname" />
	    <sequential>
	        <git command = "clone">
	            <args>
	                <arg value = "@{repository}" />
	                <arg value = "@{dest}" />
	            </args>
	        </git>
	        <git command = "checkout" dir = "@{dest}">
	        	<args>
	                <arg value = "@{refname}" />
	            </args>
	        </git>
	    	<git command = "pull" dir = "@{dest}" >
	        	<args>
	                <arg value = "@{repository}" />
	                <arg value = "@{refname}" />
	            </args>
	        </git>
	    </sequential>
	</macrodef>
	
	<!-- get metacatUI project -->
	<target name="getMetacatUI" depends="init">
		<git-clone-pull repository="${metacatui.git.repository.url}" dest="${metacatui.build.dir}" refname="${metacatui.git.repository.refname}" />
	</target>
	
	<target name="build-metacat-ui" description="Calls the Maven build for metacatUI war" depends="getMetacatUI" unless="build-metacat-ui-called">
		<artifact:mvn pom="${metacatui.build.dir}/metacatui/pom.xml" mavenhome="${maven.home}" fork="true">
			<arg value="clean"/>
		</artifact:mvn>
		<artifact:mvn pom="${metacatui.build.dir}/metacatui/pom.xml" mavenhome="${maven.home}" fork="true">
		   <arg value="package"/>
		</artifact:mvn>
		<property name="build-metacat-ui-called" value="true"/>
	</target>
	
	<target name="dist-metacat-ui" depends="build-metacat-ui">
		<copy tofile="${dist.dir}/metacatui.war" >
			<fileset dir="${metacatui.build.dir}/metacatui/target" includes="*.war"></fileset>
		</copy>	
	</target>
    	
	<taskdef resource="axis-tasks.properties"
		classpathref="axis.ant.classpath" />
	
	<!-- Determine if ecogrid should be installed-->
	<condition property="enable.ecogrid">
		<equals arg1="${install.ecogrid}" arg2="true" />
	</condition>

	<!-- Determine if perl should be built-->
	<condition property="build.perl">
		<equals arg1="${make.perl.code}" arg2="true" />
	</condition>

	<available file="${build.tomcat.dir}/common/lib/servlet-api.jar" 
			property="tomcat.common.exists" />

	<target name="config" depends="setTomcatCommon, setTomcatNoCommon">
		<!-- usr for client testing, generally you don't need change-->
		<property name="mcuser"
			value="uid=kepler,o=unaffiliated,dc=ecoinformatics,dc=org" />
		<property name="mcpassword" value="kepler" />
		<property name="mcanotheruser"
			value="uid=tao,o=NCEAS,dc=ecoinformatics,dc=org" />
		<property name="mcanotherpassword" value="yourpass" />
		<property name="piscouser"
			value="uid=tao,o=PISCO,dc=ecoinformatics,dc=org" />
		<property name="piscopassword" value="yourpass" />
		<property name="lteruser"
			value="uid=jtao,o=LTER,dc=ecoinformatics,dc=org" />
		<property name="lterpassword" value="yourpass" />

		<property name="debug" value="on" />
		<property name="morphosourcedir" value="../morpho" />
		<property name="installdir"
			value="${app.deploy.dir}/${metacat.context}" />

		<echo>*********** set jsdk to ${jsdk}</echo>
	</target>
	
	<target name="setTomcatCommon" if="tomcat.common.exists" >
		<property name="jsdk"
			value="${build.tomcat.dir}/common/lib/servlet-api.jar" />
	</target>
	
	<target name="setTomcatNoCommon" unless="tomcat.common.exists" >
		<property name="jsdk"
			value="${build.tomcat.dir}/lib/servlet-api.jar" />
	</target>
	
	<target name="init" depends="config, build-metacat-common" unless="init.called">
		
	    <property name="libdir.mvn" value="lib/maven" />
		<mkdir dir="${libdir.mvn}"/>
		
		<path id="base.classpath">
			<pathelement location="${jsdk}" />
            <pathelement location="lib" />
			
			<fileset dir="lib">
				<include name="*.jar" />
			</fileset>
			
			<fileset dir="lib/lsid_lib">
				<include name="*.jar" />
			</fileset>

			<!-- Include everything from maven -->
			<fileset dir="${libdir.mvn}">
				<include name="*.jar" />
			</fileset>

		</path>
		
		<path id="test.classpath">
			<pathelement location="${jsdk}" />
			<pathelement location="lib" />
			<fileset dir="lib">
				<include name="*.jar" />
				<exclude name="maven-ant-tasks-2.1.0.jar" />
			</fileset>
			<fileset dir="lib/lsid_lib">
				<include name="*.jar" />
			</fileset>
			<!-- Include maven -->
			<fileset dir="${libdir.mvn}">
				<include name="*.jar" />
			</fileset>
		</path>
		
		<!-- define the maven tasks -->
		<taskdef uri="antlib:org.apache.maven.artifact.ant"
			       resource="org/apache/maven/artifact/ant/antlib.xml"
			       classpathref="base.classpath" />

	   	<!-- Resolve maven dependencies -->
		<artifact:pom id="metacatPom" file="pom.xml" />
		<artifact:dependencies filesetId="dependency.fileset" pomrefid="metacatPom" usescope="runtime"/>
		<artifact:dependencies pathId="dependency.classpath" pomrefid="metacatPom"/>
	   		   	
	   	<!-- combine base and dependencies for the classpath -->
	   	<path id="compile.classpath">
	   		<path refid="base.classpath" />	
	   		<path refid="dependency.classpath" />	
		</path>

		<!-- It is less likely you'll need to make any changes from here down,
			but customization is possible -->
		<property name="name" value="metacat" />
		<property name="Name" value="MetaCat" />
		<property name="debugprefix" value="${Name}:" />
		<property name="release" value="${metacat.version}" />
		<tstamp>
		    <format property="copyrightyear" pattern="yyyy" locale="en,US"/>
		</tstamp>
		<property name="copyright" value="${copyrightyear} Regents of the University of California" />
		<property name="style-common-relpath" value="/style/common" />
		<property name="style-shared-relpath" value="/style/shared" />
		<property name="schema-relpath" value="/schema" />
		<property name="style-common-cvsrelpath"
			value="lib${style-common-relpath}" />
		<property name="schema-cvsrelpath" value="lib${schema-relpath}" />
		<property name="style-skins-relpath" value="/style/skins" />
		<property name="seek-tag" value="tags/ECOGRID_1_2_3" />
		<property name="eml-module" value="eml" />
		<property name="eml-version" value="2.0.0beta6" />
		<property name="eml-beta4-version" value="2.0.0beta4" />
		<property name="eml-beta-tag"
			value="BRANCH_EML_2_0_0_BETA_6_FOR_METACAT" />
		<property name="eml-beta4-tag"
					value="RELEASE_EML_2_BETA_4" />
		<property name="eml2_0_0-schema-tag"
			value="RELEASE_EML_2_0_0_UPDATE_1" />
		<property name="eml2_0_1-schema-tag" value="RELEASE_EML_2_0_1" />
		<property name="eml2_1_0-schema-tag" value="RELEASE_EML_2_1_0" />
		<property name="eml2_1_1-schema-tag" value="RELEASE_EML_2_1_1" />
		<!--<property name="eml2-style-tag" value="RELEASE_EML_UTILS_1_0_7" />-->
		<property name="eml2-style-tag" value="RELEASE_EML_UTILS_1_1_2" />

		<property name="eml2_0_0namespace"
			value="eml://ecoinformatics.org/eml-2.0.0" />
		<property name="eml2_0_1namespace"
			value="eml://ecoinformatics.org/eml-2.0.1" />
		<property name="eml2_1_0namespace"
			value="eml://ecoinformatics.org/eml-2.1.0" />
		<property name="eml2_1_1namespace"
			value="eml://ecoinformatics.org/eml-2.1.1" />
		<property name="stmmlnamespace"
			value="http://www.xml-cml.org/schema/stmml" />
		<property name="stmml11namespace"
			value="http://www.xml-cml.org/schema/stmml-1.1" />
		<property name="eml-css" value="eml_xsl.css" />
		<property name="eml-module.default.css" value="default.css" />
		<property name="systemidserver" value="" />
		<property name="html-path" value="" />
		<property name ="metacat-properties-file" value="build/war/WEB-INF/metacat.properties"/>


		<!-- Config for registry variables -->
		<!-- TODO: SCW remove these, covered in metacat.properties or in skin.properties -->
		<property name="scope" value="obfs" />
		<property name="responseForm" value="genericResponse.tmpl" />
		<property name="entryForm" value="entryForm.tmpl" />
		<property name="guide" value="genericGuide.tmpl" />
		<property name="loginForm" value="loginForm.tmpl" />
		<property name="confirmData" value="confirmData.tmpl" />
		<property name="deleteData" value="deleteData.tmpl" />
		<property name="genericHeader" value="genericHeader.tmpl" />
		<property name="genericFooter" value="genericFooter.tmpl" />

		<filter token="scope" value="${scope}" />
		<filter token="responseForm" value="${responseForm}" />
		<filter token="entryForm" value="${entryForm}" />
		<filter token="guide" value="${guide}" />
		<filter token="loginForm" value="${loginForm}" />
		<filter token="confirmData" value="${confirmData}" />
		<filter token="deleteData" value="${deleteData}" />
		<filter token="genericHeader" value="${genericHeader}" />
		<filter token="genericFooter" value="${genericFooter}" />
		<filter token="adminname" value="${adminname}" />
		<filter token="recipient" value="${recipient}" />
		<filter token="metacatVersion" value="${metacat.version}" />
		<filter token="metacatRC" value="${metacat.releaseCandidate}" />
		<filter token="build.context" value="${metacat.context}" />

		<filter token="docrooturl" value="./" />
		<filter token="mcuser" value="${mcuser}" />
		<filter token="mcpassword" value="${mcpassword}" />
		<filter token="mcanotheruser" value="${mcanotheruser}" />
		<filter token="mcanotherpassword" value="${mcanotherpassword}" />
		<filter token="eml-css" value="${eml-css}" />
		<filter token="style-skins-relpath"
			value="${style-skins-relpath}" />
		<filter token="style-common-relpath"
			value="${style-common-relpath}" />

		<filter token="eml-version" value="${eml-version}" />
		<filter token="eml-beta4-version" value="${eml-beta4-version}" />
		<filter token="eml2_0_0namespace" value="${eml2_0_0namespace}" />
		<filter token="eml2_0_1namespace" value="${eml2_0_1namespace}" />
		<filter token="eml2_1_0namespace" value="${eml2_1_0namespace}" />
		<filter token="eml2_1_1namespace" value="${eml2_1_1namespace}" />
		<filter token="stmmlnamespace" value="${stmmlnamespace}" />
		<filter token="stmml11namespace" value="${stmml11namespace}" />
		<filter token="debugprefix" value="${debugprefix}" />

		<filter token="defaultStage" value="${defaultStage}" />
		<filter token="defaultHeader" value="${defaultHeader}" />
		<filter token="defaultFooter" value="${defaultFooter}" />
		<filter token="defaultChangePass" value="${defaultChangePass}" />
		<filter token="defaultResetPass" value="${defaultResetPass}" />
		<filter token="changePassSuccess" value="${changePassSuccess}" />
		<filter token="resetPassSuccess" value="${resetPassSuccess}" />
		<filter token="registerFailed" value="${registerFailed}" />
		<filter token="registerLter" value="${registerLter}" />
		<filter token="registerMatch" value="${registerMatch}" />
		<filter token="registerSuccess" value="${registerSuccess}" />
		<filter token="register" value="${register}" />
		<filter token="searchResults" value="${searchResults}" />
		<filter token="ldapMainServerFailure"
			value="${ldapMainServerFailure}" />
		<filter token="lter-user" value="${lteruser}" />
		<filter token="lter-pass" value="${lterpassword}" />
		<filter token="pisco-user" value="${piscouser}" />
		<filter token="pisco-pass" value="${piscopassword}" />


		<!-- MCD BYE filter token="timedreplication"     value="${timedreplication}" / -->
		<!-- MCD BYE filter token="firsttimedreplication" value="${firsttimedreplication}" / -->
		<!-- MCD BYE filter token="timedreplicationinterval" value="${timedreplicationinterval}" / -->

		<property name="srcdir" value="./src" />
		<property name="lib.dir" value="./lib" />
		<property name="docdir" value="./docs" />
		<property name="cgidir" value="./cgi-bin" />
		<property name="testdir" value="./test" />
		<property name="testtorun" value="MNodeServiceTest" />
		<property name="junittestsdir"
			value="./test/edu/ucsb/nceas/metacattest" />
		<property name="junitnettestsdir"
			value="./test/edu/ucsb/nceas/metacatnettest" />
		<property name="classtorun" value="edu.ucsb.nceas.metacat.admin.upgrade.dataone.GenerateSystemMetadata" />
		<property name="build.dir" value="./build" />
		<property name="build.src" value="${build.dir}/src" />
		<property name="build.dest" value="${build.dir}/classes" />
		<property name="build.samples" value="${build.dir}/samples" />
		<property name="build.tests" value="${build.dir}/tests" />
		<property name="build.tmp" value="${build.dir}/tmp" />
		<property name="build.metacattest"
			value="${build.tests}/metacattest" />
		<property name="build.metacatnettest"
			value="${build.tests}/metacatnettest" />
		<property name="build.data" value="${build.dir}/data" />
		<property name="build.docs" value="${build.dir}/docs" />
		<property name="build.javadocs" value="${build.docs}/api" />
		<property name="build.war" value="${build.dir}/war" />
		<property name="dist.dir" value="dist" />
		<property name="ver.dir" value="${dist.dir}/${name}-${release}" />
		<property name="ver.src" value="${ver.dir}/src" />
		<property name="test.dir" value="${dist.dir}/test" />
		<!-- directories for creating a Harvest List Editor distribution -->
		<property name="dist.dir.hle" value="disthle" />
		<property name="ver.dir.hle"
			value="${dist.dir.hle}/harvest-list-editor-${release}" />
		<property name="pkg.dir" value="./package" />
		<property name="deb.pkg.dir" value="${pkg.dir}/debian" />

		<property name="ecogrid-target-name" value="metacatImpl" />
		<property name="ecogrid-module-dest-dir" value=".." />
		<property name="ecogrid-module" value="seek/projects/ecogrid" />
		<property name="ecogrid-dist-dir"
			value="${dist.dir}/${ecogrid-module}" />
		<property name="ecogrid-dir"
			value="${ecogrid-module-dest-dir}/${ecogrid-module}" />

		<property name="package.home" value="edu/ucsb/nceas/metacat" />

		<!-- set up svn -->
		<property name="svnant.lib" value="lib" />
		<property name="svnant.jar" value="${svnant.lib}/svnant.jar" />
		<property name="svnClientAdapter.jar"
			value="${svnant.lib}/svnClientAdapter.jar" />
		<property name="svnjavahl.jar"
			value="${svnant.lib}/svnjavahl.jar" />
		<property name="svn.ecogridUrl"
			value="https://code.ecoinformatics.org/code/seek/${seek-tag}/projects/ecogrid/" />
		<property name="svn.emlBetaUrl"
			value="https://code.ecoinformatics.org/code/eml/branches/${eml-beta-tag}" />
		<property name="svn.emlBeta4Url"
					value="https://code.ecoinformatics.org/code/eml/tags/${eml-beta4-tag}" />
		<property name="svn.eml200SchemaUrl"
			value="https://code.ecoinformatics.org/code/eml/tags/${eml2_0_0-schema-tag}" />
		<property name="svn.eml201SchemaUrl"
			value="https://code.ecoinformatics.org/code/eml/tags/${eml2_0_1-schema-tag}" />
		<property name="svn.eml210SchemaUrl"
			value="https://code.ecoinformatics.org/code/eml/tags/${eml2_1_0-schema-tag}" />
		<property name="svn.eml211SchemaUrl"
			value="https://code.ecoinformatics.org/code/eml/tags/${eml2_1_1-schema-tag}" />
		<property name="svn.eml2StyleUrl"
			value="https://code.ecoinformatics.org/code/eml/tags/${eml2-style-tag}" />
		
		<!-- the git repo -->
		<property name="metacatui.git.repository.url"
					value="https://github.com/NCEAS/metacatui.git" />
		<property name="metacatui.git.repository.refname"
							value="METACATUI_1_11_3" />
		<!--<property name="metacatui.git.repository.refname"
									value="master" />-->
		<property name="metacatui.build.dir"
					value="metacatui_build" />
		<property name="metacatui.resources.dir"
					value="${metacatui.build.dir}/metacatui/src/main/webapp" />
		
		<!-- load the svn task -->
		<path id="svn.classpath">
			<pathelement location="${svnjavahl.jar}" />
			<pathelement location="${svnant.jar}" />
			<pathelement location="${svnClientAdapter.jar}" />
		</path>
		<taskdef resource="svntask.properties"
			classpathref="svn.classpath" />

		<condition property="eml.required">
			<or>
				<not>
					<available file="lib/schema/eml-2.0.1/eml.xsd" />
				</not>
				<not>
					<available file="lib/schema/eml-2.0.0/eml.xsd" />
				</not>
				<not>
					<available file="lib/schema/eml-2.1.0/eml.xsd" />
				</not>
				<not>
					<available
						file="lib/dtd/eml-dataset-2.0.0beta6.dtd" />
				</not>
			</or>
		</condition>

		<condition property="ecogrid.required">
			<or>
				<not>
					<available file="${ecogrid-dir}/build.properties" />
				</not>
				<not>
					<available
						file="${ecogrid-dir}/buildfiles/metacatImpl.xml" />
				</not>
			</or>
		</condition>
		
		<property name="init.called" value="true" />

	</target>
	
	<target name="resolveDependencies" depends="init" description="retrieve dependencies with maven">
			<echo>Moving Maven dependencies (${dependency.fileset}) to ${libdir.mvn} </echo>
			<!-- Clear out mvn dir -->
			<delete dir="${libdir.mvn}"></delete>
			<!-- Copy all dependencies to the correct location. -->
			<copy todir="${libdir.mvn}">
				<fileset refid="dependency.fileset" />
				<!-- This mapper strips off all leading directory information -->
				<mapper type="flatten" />
			</copy>
		</target>

	<target name="prepare" depends="init, resolveDependencies">
		<mkdir dir="${build.dir}" />
		<mkdir dir="${build.src}" />
		<mkdir dir="${build.dest}" />
		<mkdir dir="${build.docs}" />
		<mkdir dir="${build.javadocs}" />
		<mkdir dir="${build.tmp}" />

		<copy todir="${build.src}" filtering="yes">
			<fileset dir="${srcdir}">
				<include name="edu/**" />
				<include name="com/**" />
				<include name="org/**" />
				<!-- include name="java/**" / -->
				<include name="**/*.sql" />
				<exclude name="**/CVS*" />
				<exclude name="**/.#*" />
				<exclude name="edu/ucsb/nceas/workflowscheduler/**" />
			</fileset>
		</copy>
		<available file="lib/style/common/emlb6toeml2" type="dir"
			property="styles.not.needed" />
	</target>

	<target name="generateStubs" depends="prepare">
		<echo
			message=" Generating stubs for execution service from ${/tmp/KeplerWebService.wsdl}" />
		<axis-wsdl2java verbose="true" output="${srcdir}"
			url="/tmp/KeplerWebService.wsdl" />
	</target>

	<target name="compile" depends="prepare"
		description="Compiles java code to build dir, and copies metacat props files there">

		<javac srcdir="${build.src}" destdir="${build.dest}"
			target="${java.target.version}"
			source="${java.source.version}"
			debug="${debug}"
			excludes="**/*.sql **/client/*.java **/harvesterClient/*.java">
			<classpath>
				<path refid="compile.classpath" />
			</classpath>
		</javac>
	</target>

	<target name="jar" depends="compile,geteml"
		description="Compiles and jars metacat java code to metacat.jar in build dir ">

		<delete file="${build.dir}/${name}.jar" />
		<jar jarfile="${build.dir}/${name}.jar" basedir="${build.dest}"
			excludes="**/protocols/ **/harvesterClient/" />
	</target>

	<target name="protocol" depends="compile"
		description="Compiles and jars protocol java code to protocol.jar in build dir">
		<delete file="${build.dir}/protocol.jar" />
		<jar jarfile="${build.dir}/protocol.jar" basedir="${build.dest}"
			includes="**/protocols/" />
	</target>


	<target name="client" depends="prepare"
		description="Compiles metacat-client java code to build dir">
		<javac srcdir="${build.src}" destdir="${build.dest}"
			target="${java.target.version}"
			source="${java.source.version}"
			includes="edu/ucsb/nceas/metacat/client/*">
			<classpath>
				<path refid="compile.classpath" />
			</classpath>
		</javac>
	</target>

	<target name="clientjar" depends="client"
		description="Compiles and jars metacat-client java code to metacat-client.jar in build dir">
		<delete file="${build.dir}/${name}-client.jar" />
		<jar jarfile="${build.dir}/${name}-client.jar"
			basedir="${build.dest}" includes="**/metacat/client/" />
	</target>

	<target name="advancedsearchjar" depends="compile"
		description="Compiles and jars advanced search Java code to advancedsearch.jar in build dir">
		<delete file="${build.dir}/advancedsearch.jar" />
		<jar jarfile="${build.dir}/advancedsearch.jar"
			basedir="${build.dest}" includes="**/metacat/advancedsearch/" />
	</target>

	<target name="harvester" depends="client"
		description="Compiles harvester java code to build dir">
		<javac srcdir="${build.src}" destdir="${build.dest}"
			target="${java.target.version}"
			source="${java.source.version}"
			includes="edu/ucsb/nceas/metacat/harvesterClient/*">
			<classpath>
				<path refid="compile.classpath" />
			</classpath>
		</javac>
	</target>
		
	<target name="harvesterjar" depends="harvester"
		description="Compiles and jars harvester java code to harvester.jar in build dir">
		<delete file="${build.dir}/harvester.jar" />
		<jar jarfile="${build.dir}/harvester.jar"
			basedir="${build.dest}" includes="**/metacat/harvesterClient/" />
	</target>

	<target name="harvestListEditorDist" depends="harvesterjar"
		description="Prepares a distribution of the Harvest List Editor tool">
		<mkdir dir="${dist.dir.hle}" />
		<delete dir="${ver.dir.hle}" />
		<mkdir dir="${ver.dir.hle}" />
		<copy todir="${ver.dir.hle}" file="${build.dir}/harvester.jar" />
		<copy todir="${ver.dir.hle}" file="lib/xercesImpl.jar" />
		<copy todir="${ver.dir.hle}"
			file="lib/harvester/harvestList.xsd" />
		<copy todir="${ver.dir.hle}"
			file="lib/harvester/harvestListEditor.bat" />
		<copy todir="${ver.dir.hle}"
			file="lib/harvester/harvestListEditor.sh" />
		<delete file="./harvest-list-editor-${release}.zip" />
		<zip zipfile="./harvest-list-editor-${release}.zip"
			basedir="${ver.dir.hle}" />
		<delete file="./harvest-list-editor-${release}.tar.gz" />
		<tar tarfile="./harvest-list-editor-${release}.tar"
			basedir="${ver.dir.hle}" />
		<gzip zipfile="./harvest-list-editor-${release}.tar.gz"
			src="./harvest-list-editor-${release}.tar" />
		<delete file="./harvest-list-editor-${release}.tar" />
	</target>

	<target name="geteml" depends="getemlpre2,getemlpre2beta4,geteml2+,getConversionXSL"
		if="eml.required" description="Calls getemlpre2 and geteml2+ targets" />

	<target name="getemlpre2" depends="prepare" if="eml.required"
		description="Checks EML-beta6 out of svn and copies dtds and xsl to your metacat sandbox">
		<svn>
			<export srcUrl="${svn.emlBetaUrl}"
				destPath="${build.tmp}/eml_${eml-beta-tag}" />
		</svn>
		<mkdir dir="lib/dtd" />
		<copy todir="lib/dtd" filtering="yes">
			<fileset
				dir="${build.tmp}/eml_${eml-beta-tag}">
				<include name="*.dtd" />
			</fileset>
			<mapper type="glob" from="eml-*.dtd"
				to="eml-*-${eml-version}.dtd" />
		</copy>

		<copy todir="${style-common-cvsrelpath}" filtering="yes">
			<fileset
				dir="${build.tmp}/eml_${eml-beta-tag}/style">
				<include name="**/*.xsl" />
			</fileset>
		</copy>
	</target>
	
	<target name="getemlpre2beta4" depends="prepare" if="eml.required"
			description="Checks EML-beta4 out of svn and copies dtds to your metacat sandbox">
			<svn>
				<export srcUrl="${svn.emlBeta4Url}"
					destPath="${build.tmp}/eml_${eml-beta4-tag}" />
			</svn>
			<mkdir dir="lib/dtd" />
			<copy todir="lib/dtd" filtering="yes">
				<fileset
					dir="${build.tmp}/eml_${eml-beta4-tag}">
					<include name="*.dtd" />
				</fileset>
				<mapper type="glob" from="eml-*.dtd"
					to="eml-*-${eml-beta4-version}.dtd" />
			</copy>

			<!--
			<copy todir="${style-common-cvsrelpath}" filtering="yes">
				<fileset
					dir="${build.tmp}/eml_${eml-beta4-tag}/style">
					<include name="**/*.xsl" />
				</fileset>
			</copy>
			-->
		</target>

	<target name="geteml2+" depends="prepare" if="eml.required"
		description="Checks eml-2 out of svn and copies schema and xsl to your metacat sandbox">
		<svn>
			<export srcUrl="${svn.eml200SchemaUrl}"
				destPath="${build.tmp}/eml_${eml2_0_0-schema-tag}" />
		</svn>
		<mkdir dir="lib/schema/eml-2.0.0" />
		<copy todir="lib/schema/eml-2.0.0" filtering="yes">
			<fileset
				dir="${build.tmp}/eml_${eml2_0_0-schema-tag}">
				<include name="*.xsd" />
			</fileset>

			<!-- shouldn't we have a mapper here like this??
				<mapper type="glob" from="eml-*.xsd" to="eml-*-${eml-version}.xsd" />
				
				Jing's code didn't nave one - does it need to be added?
				NOTE that eml-version is set to beta 6, so this would need changing -->

		</copy>
		<!-- <antcall target="copyxsl">
			<param name="cvs.tagname" value="${eml2_0_0-schema-tag}" />
			<param name="dirname" value="eml-2.0.0" />
			</antcall> -->

		<!-- Checkout eml201 for given schema tag-->
		<svn>
			<export srcUrl="${svn.eml201SchemaUrl}"
				destPath="${build.tmp}/eml_${eml2_0_1-schema-tag}" />
		</svn>
		<mkdir dir="lib/schema/eml-2.0.1" />
		<copy todir="lib/schema/eml-2.0.1" filtering="yes">
			<fileset
				dir="${build.tmp}/eml_${eml2_0_1-schema-tag}">
				<include name="*.xsd" />
			</fileset>
		</copy>

		<!-- Checkout eml201 again for given style sheet tag-->
		<!-- echo>Enter CVS password: </echo>
			<cvs cvsRoot="${cvsroot}"
			package="${eml-module}"
			tag="${eml2_0_1-style-tag}"
			dest="${build.tmp}/eml_${eml2_0_1-style-tag}" />
			<antcall target="copyxsl">
			<param name="cvs.tagname" value="${eml2_0_1-style-tag}" />
			<param name="dirname" value="eml-2.0.1" />
			</antcall -->

		<!-- Checkout eml210 for given schema tag-->
		<svn>
			<export srcUrl="${svn.eml210SchemaUrl}"
				destPath="${build.tmp}/eml_${eml2_1_0-schema-tag}" />
		</svn>
		<mkdir dir="lib/schema/eml-2.1.0" />
		<copy todir="lib/schema/eml-2.1.0" filtering="yes">
			<fileset
				dir="${build.tmp}/eml_${eml2_1_0-schema-tag}">
				<include name="*.xsd" />
			</fileset>
		</copy>

		<!-- Checkout eml210 for given style sheet tag-->
		<svn>
			<export srcUrl="${svn.eml2StyleUrl}"
				destPath="${build.tmp}/eml_${eml2-style-tag}" />
		</svn>
		<antcall target="copyxsl">
			<param name="cvs.tagname" value="${eml2-style-tag}" />
			<!-- param name="dirname" value="eml-2.1.0" / -->
			<param name="dirname" value="eml-2" />
		</antcall>
		
		<!-- Checkout eml210 for given schema tag-->
		<svn>
			<export srcUrl="${svn.eml211SchemaUrl}"
				destPath="${build.tmp}/eml_${eml2_1_1-schema-tag}" />
		</svn>
		<mkdir dir="lib/schema/eml-2.1.1" />
		<copy todir="lib/schema/eml-2.1.1" filtering="yes">
			<fileset
				dir="${build.tmp}/eml_${eml2_1_1-schema-tag}">
				<include name="*.xsd" />
			</fileset>
		</copy>
	</target>

	<target name="copyxsl"
		description="Copies xsl stylesheets from checkout in build/tmp to your metacat sandbox">

		<delete file="${style-common-cvsrelpath}/${eml-css}" />

		<copy todir="${style-common-cvsrelpath}/${dirname}"
			filtering="yes">
			<fileset
				dir="${build.tmp}/eml_${cvs.tagname}/style/eml">
				<include name="**/*.xsl" />
			</fileset>
		</copy>


		<!-- now copy default css from eml module and put it in style-common-path
			dir with a new name, so other skin-specific css can import it if reqd -->
		<copy
			file="${build.tmp}/eml_${cvs.tagname}/${eml-module.default.css}"
			tofile="${style-common-cvsrelpath}/${eml-css}" />

	</target>

	<target name="correctEML201Docs" depends="jar"
		description="Uses the ant  task to run a JAVA patch class to correct invalide eml201 documents which were generated by wrong schema">
		<copy todir="${build.dir}" file="lib/metacat.properties"
			filtering="yes" />
		<java
			classname="edu.ucsb.nceas.metacat.EML201DocumentCorrector">
			<classpath>
				<path refid="compile.classpath" />
				<fileset dir="${build.dir}">
					<include name="${name}.jar" />
				</fileset>
			</classpath>
		</java>
	</target>

	<target name="install-spatial" depends="jar,clientjar,harvesterjar"
		description="Installs spatial option for metacat">
		
		<copy todir="${dist.dir}">
			<fileset dir="./lib/spatial/geoserver" includes="*.war" />
		</copy>

	</target>

	<target name="install" depends="build-metacat"
		description="* Install Metacat For Development *">
		<copy file="${dist.dir}/${metacat.context}.war"
			todir="${app.deploy.dir}" />
		<delete dir="${app.deploy.dir}/${metacat.context}" />
		<copy file="${dist.dir}/geoserver.war"
					todir="${app.deploy.dir}" />
		<delete dir="${app.deploy.dir}/geoserver" />
		<copy file="${dist.dir}/metacat-index.war"
					todir="${app.deploy.dir}" />
		<delete dir="${app.deploy.dir}/metacat-index" />
		<copy file="${dist.dir}/metacatui.war"
					todir="${app.deploy.dir}" />
		<delete dir="${app.deploy.dir}/metacatui" />
		<tstamp>
			<format property="NOW" pattern="MM/dd/yyyy hh:mm:ss aa" />
		</tstamp>
		<echo>Dev install completed at ${NOW}</echo>
	</target>

	<target name="build-metacat" depends="install-ecogrid, install-spatial, dist-metacat-index, dist-metacat-ui"
		description="Build Metacat">
	</target>

	<target name="install-ecogrid" depends="warPrepare, get-ecogrid"
		if="enable.ecogrid" description="Install Ecogrid Compentent">
		<ant antfile="build.xml" dir="${ecogrid-dir}" target="clean"
			inheritall="false">
			<property name="context" value="${metacat.context}" />
			<property name="target" value="${ecogrid-target-name}" />
		</ant>
		<ant antfile="build.xml" dir="${ecogrid-dir}" target="war"
			inheritall="false">
			<property name="context" value="${metacat.context}" />
			<property name="target" value="${ecogrid-target-name}" />
			<property name="metacat.dir" value="${basedir}"/>
		</ant>
		<!-- war destfile="${ecogrid-dir}/build/${metacat.context}.war" update="true">
			<webinf dir="${ecogrid-dir}/lib">
			<include name="server-config.wsdd"/>
			</webinf>
			</war -->
		<copy file="${ecogrid-dir}/build/${metacat.context}.war"
			todir="${dist.dir}" overwrite="true" />


	</target>

	<target name="get-ecogrid" depends="init"
		description="Check out ecogrid module" if="ecogrid.required">
		<svn>
			<export srcUrl="${svn.ecogridUrl}" force="true"
				destPath="${ecogrid-dir}" />
		</svn>
	</target>

	<!-- target name="deploy-ecogrid" depends="clean-ecogrid-server-config-wsdd" if="enable.ecogrid" description="Automately generate wsdd for ecogrid service">
		<ant antfile="build.xml" dir="${ecogrid-dir}" target ="deploy" inheritall="false">
		<property name="context" value="${metacat.context}"/>
		<property name="target" value="${ecogrid-target-name}"/>
		<property name="metacat.dir" value="."/>
		<property name="hostname" value="${ecogrid.hostname}"/>
		<property name="port" value="${config.port}"/>
		</ant>
		</target -->

	<target name="clean-ecogrid-server-config-wsdd" depends="init"
		description="Automately generate wsdd for ecogrid service">
		<delete
			file="${app.deploy.dir}/${metacat.context}/WEB-INF/server-config.wsdd" />
	</target>

	<target name="install-skin" depends="init"
		description="Install a Skin">

		<input message="Please enter name of the skin"
			addproperty="skin-name" />

		<mkdir dir="${installdir}/style/skins/${skin-name}" />
		<copy todir="${installdir}/style/skins/${skin-name}"
			filtering="yes">
			<fileset dir="lib/style/skins/${skin-name}">
				<exclude name="**/*.png" />
				<exclude name="**/*.gif" />
				<exclude name="**/*.jpg" />
				<exclude name="**/CVS*" />
				<exclude name="**/.#*" />
			</fileset>
		</copy>
		<copy todir="${installdir}/style/skins/${skin-name}"
			filtering="no">
			<fileset dir="lib/style/skins/${skin-name}">
				<include name="**/*.png" />
				<include name="**/*.gif" />
				<include name="**/*.jpg" />
				<exclude name="**/CVS*" />
				<exclude name="**/.#*" />
			</fileset>
		</copy>
		<copy todir="${installdir}/style/common" filtering="yes">
			<fileset dir="lib/style/common">
				<include name="*.js" />
				<include name="*.jsp" />
				<include name="*.css" />
				<exclude name="*.png" />
				<exclude name="*.gif" />
				<exclude name="*.jpg" />
				<exclude name="**/CVS*" />
				<exclude name="**/.#*" />
			</fileset>
		</copy>
		<!--
			<mkdir dir="${installdir}/style/skins/${skin-name}/images" />
			<copy todir="${installdir}/style/skins/${skin-name}/images" filtering="no">
			<fileset dir="lib/style/skins/${skin-name}/images">
			<include name="*.png"/>
			<include name="*.gif"/>
			<include name="*.jpg"/>
			</fileset>
			</copy>
		-->

		<echo message="Install Skin completed." />
	</target>

	<target name="war" depends="warPrepare,install-spatial"
		description="Create a web archive (WAR) for servlet deployment">
		<mkdir dir="${dist.dir}" />
		<war destfile="${dist.dir}/${metacat.context}.war"
			webxml="${build.war}/web.xml">
			<fileset dir="${war.context}" />
			<lib dir="${war.lib}" />
			<webinf dir="${war.webinf}" />
		</war>
	</target>

	<target name="warPrepare"
		depends="cgiPrepare,jar,clientjar,harvesterjar,testPrepare,documentation"
		description="Prepare files for creating a web archive (WAR)">

		<property name="war.lib" value="${build.war}/lib" />
		<property name="war.webinf" value="${build.war}/WEB-INF" />
		<property name="war.context"
			value="${build.war}/${metacat.context}" />
		<property name="war.webinf.sql" value="${war.webinf}/sql" />
		<property name="war.webinf.scripts"
			value="${war.webinf}/scripts" />
		<property name="war.context.cgi" value="${war.context}/cgi-bin" />
		<property name="war.context.docs" value="${war.context}/docs" />
		<property name="war.context.temp" value="${war.context}/temp" />
		<property name="war.context.templates"
			value="${war.context}${style-common-relpath}/templates" />
		<mkdir dir="${war.lib}" />
		<mkdir dir="${war.webinf}" />
		<mkdir dir="${war.context}" />
		<mkdir dir="${war.webinf.sql}" />
		<mkdir dir="${war.context.cgi}" />
		<mkdir dir="${war.context.docs}" />
		<mkdir dir="${war.context.temp}" />
		<mkdir dir="${war.context.templates}" />

		<!--copy file="${lib.dir}/${jdbc.lib.postgres}" todir="${war.lib}" / -->
		<!--copy file="${lib.dir}/${jdbc.lib.sqlserver1}" todir="${war.lib}" / -->
		<!--copy file="${lib.dir}/${jdbc.lib.sqlserver2}" todir="${war.lib}" / -->
		<!--copy file="${lib.dir}/${jdbc.lib.sqlserver3}" todir="${war.lib}" / -->
		<copy file="${build.dir}/${name}.jar" todir="${war.lib}" />
		<copy file="${build.dir}/${name}-client.jar" todir="${war.lib}" />
		<copy file="${build.dir}/harvester.jar" todir="${war.lib}" />
		<copy todir="${war.lib}" filtering="no">
			<fileset dir="lib">
				<include name="*.jar" />
				<exclude name="maven-ant-tasks*.jar" />
			</fileset>
			<fileset dir="${libdir.mvn}" />			
		</copy>
		<!-- MCD copy file="lib/web.xml.${tomcatversion}"
			tofile="${build.war}/web.xml" / -->
		<!-- MCD added next - Remove the tomcat5 reference-->
		<copy file="lib/web.xml.tomcat6" tofile="${build.war}/web.xml" />
		<copy file="lib/metacat.properties" todir="${war.webinf}"
			filtering="yes" />
		<copy todir="${war.webinf}" filtering="yes">
		    <fileset dir="lib/account-web-info">
		       <exclude name="web.xml" />
		    </fileset>
		</copy>
		<copy file="lib/solrQueryFieldDescriptions.properties" todir="${war.webinf}"/>
		<copy file="lib/metacat.properties.metadata.xml"
			todir="${war.webinf}" filtering="no" />
		<copy file="lib/org.properties.metadata.xml"
			todir="${war.webinf}" filtering="no" />
		<copy file="lib/auth.properties.metadata.xml"
			todir="${war.webinf}" filtering="no" />
		<copy todir="${war.webinf}" filtering="yes">
			<fileset dir="lib">
				<include name="skin.configs/**" />
			</fileset>
		</copy>
		<copy file="lib/log4j.properties" todir="${war.webinf}"
			filtering="yes" /> 
		<copy file="lib/hazelcast.xml" todir="${war.webinf}"
			filtering="yes" />
		<!--<copy file="lib/oa4mp_client.xml" todir="${war.webinf}"
			filtering="yes" /> -->
		<copy todir="${war.context}" filtering="no">
			<fileset dir="lib">
				<include name="**/*.jpg" />
				<include name="**/*.png" />
				<include name="**/*.gif" />
				<include name="LiveMap_30/**" />
				<include name="oaipmh/**" />
			</fileset>
		</copy>
		<copy todir="${war.context}" filtering="yes">
			<fileset dir="lib">
				<exclude name="*.jar" />
				<exclude name="*.properties" />
				<exclude name="*.metadata.xml" />
				<exclude name="web.xml" />
				<exclude name="**/*.jpg" />
				<exclude name="**/*.png" />
				<exclude name="**/*.gif" />
				<exclude name="lsid_lib/**" />
				<exclude name="lsid_conf/**" />
				<exclude name="LiveMap_30/**" />
				<exclude name="oaipmh/**" />
				<exclude name="maven/**" />
				<exclude name="skin.configs/**" />
				<exclude name="spatial/geoserver/**" />
			</fileset>
		</copy>
		<copy todir="${war.context}" filtering="no">
			<fileset dir="lib">
				<include name="spatial/geoserver/data/**" />
			</fileset>
		</copy>
		<copy todir="${war.context.docs}" filtering="no">
			<fileset dir="${build.docs}" />
		</copy>
		<copy todir="${war.webinf.sql}" filtering="yes">
			<fileset dir="src">
				<include name="**/*.sql" />
			</fileset>
		</copy>
		<copy todir="${war.webinf.scripts}" filtering="yes">
			<fileset dir="src/scripts" />
		</copy>
		<copy todir="${war.webinf.scripts}"
			file="src/perl/Metacat/blib/lib/auto/Metacat/autosplit.ix"
			failonerror="false" />

		<copy file="src/perl/register-dataset.cgi"
			todir="${war.context.cgi}" />
		<copy file="src/perl/ldapweb.cgi" todir="${war.context.cgi}" />
		<copy file="src/perl/Metacat/Metacat.pm" todir="${war.lib}" />

		<!-- registry cgi section -->
		<!-- TODO SCW: use relative paths to grab these instead of copying to tmp,
			used in readDocumentFromMetacat -->
		<!-- TODO MCD copy temp files to actual location using config util?? -->
		<copy todir="${war.context.temp}" filtering="yes">
			<fileset dir="lib/style/common/emlb6toeml2">
				<include name="*.xsl" />
				<include name="*.xml" />
			</fileset>
		</copy>
		<available file="lib/style/common/emlb6toeml2" type="dir"
			property="styles.not.needed" />

		<!-- ldap cgi section -->
		<copy todir="${war.context.templates}">
			<fileset dir="lib/style/common/templates">
				<!-- SCW: Copy all files -->
			</fileset>
		</copy>
	</target>

	<target name="cgiPrepare" if="build.perl">
		<exec dir="src/perl/Metacat/" executable="make">
			<arg value="clean" />
		</exec>
		<exec dir="src/perl/Metacat/" executable="perl">
			<arg value="Makefile.PL" />
		</exec>
		<exec dir="src/perl/Metacat/" executable="make" />
	</target>

	<target name="testPrepare"
		description="Copies test files into the war directories">
		<echo>in testPrepare</echo>
		<property name="war.context.test"
			value="${build.war}/${metacat.context}/test" />
		<mkdir dir="${war.context.test}" />
		<copy todir="${war.context.test}" filtering="yes">
			<fileset dir="test/servertestfiles">
				<include name="*/**" />
			</fileset>
		</copy>
	</target>

	<target name="getConversionXSL" depends="prepare"
		unless="styles.not.needed"
		description="Gets the conversion stylesheets for eml2 beta 6 to eml 2.0.0">

		<svn>
			<export srcUrl="${svn.eml2StyleUrl}"
				destPath="${build.tmp}/conv_eml_${eml2-style-tag}" />
		</svn>

		<mkdir dir="lib/style/common/emlb6toeml2" />
		<copy todir="lib/style/common/emlb6toeml2" filtering="yes">
			<fileset
				dir="${build.tmp}/conv_eml_${eml2-style-tag}/lib/beta6toeml2/xsl">
				<include name="*.xsl" />
				<include name="*.xml" />
			</fileset>
		</copy>
	</target>

	<target name="testprep" depends="jar,clientjar,harvesterjar">
		<mkdir dir="${build.tests}" />
		<copy todir="${build.tests}" encoding="UTF-8">
			<fileset dir="${testdir}">
				<include name="edu/**" />
			</fileset>
		</copy>
		<copy todir="${build.tests}" file="${testdir}/test.properties" />

		<path id="test.classpath">
			<path refid="compile.classpath" />
			<fileset dir="${build.dir}">
				<include name="${name}.jar" />
				<include name="${name}-client.jar" />
				<include name="harvester.jar" />
			</fileset>
		</path>
		
		<pathconvert pathsep="${line.separator}|  |--" 
		             property="echo.test.classpath"
		             refid="test.classpath">
		</pathconvert>
		<echo message="|--test classpath" />
		<echo message="|  |" />
		<echo message="|  |-- ${echo.test.classpath}" />
		
		<!-- copy and compile the tests into a jar file -->
		<javac srcdir="${build.tests}" destdir="${build.tests}"
			debug="on" includes="**/*.java" encoding="UTF-8">
			<classpath refid="test.classpath" />
		</javac>

		<jar jarfile="${build.dir}/${name}-junittests.jar"
			basedir="${build.tests}" >
			<include name="**/*.class"/>
			<include name="**/*.xml"/>
		</jar>	
		
	</target>

	<target name="runoneclass" depends="testprep"
		description="Uses the ant to run a class">
		
		<java classname="${classtorun}" fork="true">
			<arg line="${args}" />
			<jvmarg value="-Dfile.encoding=UTF-8"/>
			<classpath>
				<path refid="test.classpath" />
				<fileset dir="${build.dir}">
					<include name="${name}.jar" />
					<include name="${name}-client.jar" />
					<include name="harvester.jar" />
					<include name="${name}-junittests.jar" />
				</fileset>
			</classpath>
		</java>
	</target>
	
	<target name="test" depends="testprep"
		description="Uses the ant junit task to run all JUnit tests">

		<!-- use the ant "junit" task to run JUnit tests. -->
		<junit printsummary="yes" haltonfailure="no" fork="yes"
			haltonerror="no">
			<jvmarg value="-Dfile.encoding=UTF-8"/>
			<classpath>
				<path refid="test.classpath" />
				<fileset dir="${build.dir}">
					<include name="${name}.jar" />
					<include name="${name}-client.jar" />
					<include name="harvester.jar" />
					<include name="${name}-junittests.jar" />
				</fileset>
			</classpath>

			<formatter type="plain" />

			<batchtest fork="yes" todir="${build.dir}">
				<fileset dir="${build.tests}">
					<include name="**/*.class" />
					<exclude name="**/MCTestCase.class" />
					<exclude name="**/ClientViewHelperTest.class" />
					<!-- these are not test cases -->
					<exclude name="**/MockCNode.class" />
					<exclude name="**/D1NodeServiceTest.class" />
					<exclude name="**/D1NodeServiceTest$1.class" />
					<exclude name="**/QueryRunner.class" />
					<exclude name="**/MockObjectPathMap.class" />
					<exclude name="**/HzObjectPathMapTest$1.class" />
					<exclude name="**/HzObjectPathMapTest$2.class" />
				</fileset>
			</batchtest>
		</junit>
	</target>

	<target name="runonetest" depends="testprep"
		description="Uses the ant junit task to run a single JUnit test, defined by the ${testtorun} property">

		<echo>testtorun: ${testtorun}</echo>

		<!-- use the ant "junit" task to run JUnit tests. -->
		<junit printsummary="yes" haltonfailure="no" fork="yes"
			haltonerror="no" showoutput="yes">
			<jvmarg value="-Dfile.encoding=UTF-8"/>
			<classpath>
				<path refid="test.classpath" />
				<fileset dir="${build.dir}">
					<include name="${name}.jar" />
					<include name="${name}-client.jar" />
					<include name="harvester.jar" />
					<include name="${name}-junittests.jar" />
				</fileset>
			</classpath>

			<formatter type="plain" />

			<batchtest fork="yes" todir="${build.dir}">
				<fileset dir="${build.tests}">
					<include name="**/${testtorun}.class" />
				</fileset>
			</batchtest>
		</junit>
	</target>
	
	<target name="run" depends="testprep"
			description="Uses the ant junit task to run a single JUnit test, defined by the ${testtorun} property">

			<echo>testtorun: ${testtorun}</echo>

			<!-- use the ant "junit" task to run JUnit tests. -->
			<junit printsummary="yes" haltonfailure="no" fork="yes"
				haltonerror="no" showoutput="yes">
				<jvmarg value="-Dfile.encoding=UTF-8"/>
				<classpath>
					<path refid="test.classpath" />
					<fileset dir="${build.dir}">
						<include name="${name}.jar" />
						<include name="${name}-client.jar" />
						<include name="harvester.jar" />
						<include name="${name}-junittests.jar" />
					</fileset>
				</classpath>

				<formatter type="plain" />

				<batchtest fork="yes" todir="${build.dir}">
					<fileset dir="${build.tests}">
						<include name="**/${testtorun}.class" />
					</fileset>
				</batchtest>
			</junit>
		</target>

	<target name="testharvester" depends="testprep"
		description="Uses the ant junit task to test only the Harvester code">
		<junit printsummary="yes" haltonfailure="off" fork="yes"
			haltonerror="off">
			<classpath>
				<path refid="compile.classpath" />
				<fileset dir="${build.dir}">
					<include name="${name}.jar" />
					<include name="${name}-client.jar" />
					<include name="harvester.jar" />
					<include name="${name}-junittests.jar" />
				</fileset>
			</classpath>
			<formatter type="plain" />
			<batchtest fork="yes" todir="${build.dir}">
				<fileset dir="${build.tests}">
					<include name="**/harvesterClient/*.class" />
				</fileset>
			</batchtest>
		</junit>
	</target>

	<!-- run this target, we need to check out a another morpho souce dir was checked out. -->
	<target name="nettest" depends="install"
		description="compiles and runs the metacatnettest code">

		<echo>
			*********************************** Please run ant
			gethttpclient first! ***********************************
		</echo>
		<!-- copy and compile the tests into a jar file -->
		<mkdir dir="${build.metacatnettest}" />
		<javac srcdir="${junitnettestsdir}"
			destdir="${build.metacatnettest}" includes="**/*.java">
			<classpath>
				<path refid="compile.classpath" />
				<fileset dir="${build.dir}">
					<include name="${name}.jar" />
				</fileset>
			</classpath>
		</javac>

		<jar jarfile="${build.dir}/${name}-junitnettests.jar"
			basedir="${build.metacatnettest}" includes="**/*.class" />

		<!-- use the ant "junit" task to run JUnit tests. -->
		<junit printsummary="yes" haltonfailure="no" fork="yes"
			haltonerror="no">
			<jvmarg value="-Djava.protocol.handler.pkgs=HTTPClient" />
			<classpath>
				<path refid="compile.classpath" />
				<fileset dir="${build.dir}">
					<include name="${name}.jar" />
					<include name="${name}-junitnettests.jar" />
				</fileset>
			</classpath>

			<formatter type="plain" />

			<batchtest fork="yes" todir="${build.dir}">
				<fileset dir="${build.metacatnettest}">
					<include name="**/*.class" />
				</fileset>
			</batchtest>
		</junit>
	</target>

	<target name="cleanweb" depends="clean"
		description="deletes tomcat web context dir and all its contents">
		<delete dir="${installdir}" />
	</target>


	<target name="clean" depends="init"
		description="deletes build dir and files that can be regenerated form the release">
		<delete dir="${build.dir}" />
		<delete dir="${dist.dir}" />
	    <delete dir="${metacatui.build.dir}" />
	</target>

	<target name="fullclean" depends="clean"
		description="deletes code and eml">
		<delete includeEmptyDirs="true" failonerror="false">
			<fileset dir="${style-common-cvsrelpath}">
				<include name="${eml-css}" />
				<include name="eml-*/*.xsl" />
				<include name="eml-*" />
			</fileset>
			<fileset dir="${schema-cvsrelpath}">
				<include name="eml-*/*.xsd" />
			</fileset>
			<fileset dir="${ecogrid-dir}"/>
			<fileset dir="lib/style/common/emlb6toeml2"/>
			<fileset dir="lib/dtd"/>
			<fileset dir="${libdir.mvn}"/>
		</delete>
		<!-- remove the entire directory -->
		<delete includeemptydirs="true" dir="${metacatui.build.dir}" />
		<!-- clean up the distribution files if they exist-->
		<delete file="./${name}-bin-${release}.tar.gz" />
		<delete file="./${name}-src-${release}.tar.gz" />
		<delete file="./${name}-bin-${release}.zip" />
		<delete file="./${name}-src-${release}.zip" />
	</target>
	
	<target name="documentation" depends="javadoc,admindoc"
	    description="generates Javadoc API documentation and Admin Guide">
    </target>
	
	<target name="admindoc" depends="prepare">
		<!-- Build the administrator's guide, which is a Sphinx RST project
		     For this to succeed, you must have Sphinx installed on your machine
		     See: http://sphinx.pocoo.org/ for details
		     And you must also have the 'make' build tool installed
		-->
		<exec dir="${docdir}/user/metacat" executable="make"> 
		        <arg value="plantuml"/> 
		</exec>
		
		<exec dir="${docdir}/user/metacat" executable="make"> 
		        <arg value="html"/> 
		</exec>
		
    </target>

	<target name="javadoc" depends="prepare"
		description="generates Javadoc API documentation">
		<javadoc packagenames="edu.ucsb.nceas.*"
			sourcepath="${build.src}" destdir="${build.javadocs}" author="true"
			version="true" use="true" windowtitle="${Name} API"
			doctitle="&lt;h1&gt;${Name}&lt;/h1&gt;"
			bottom="&lt;i&gt;Copyright &#169; ${copyright}. All Rights Reserved.&lt;/i&gt;">
			<classpath>
				<path refid="compile.classpath" />
			</classpath>
		</javadoc>
	</target>

	<target name="dist"
		depends="geteml,get-ecogrid,jar,protocol,documentation,getConversionXSL"
		description="prepares a full release distribution">
		<mkdir dir="${dist.dir}" />
		<delete dir="${ver.dir}" />
		<mkdir dir="${ver.dir}" />
		<copy todir="${ver.dir}">
			<fileset dir="."
				excludes="**/CVS* **/.#* src/** test/** build/** docs/** ${dist.dir}/** ${dist.dir.hle}/** metacat*.tar.gz metacat*.tar metacat*.zip" />
		</copy>
		<copy todir="${ver.dir}" file="build.xml" />
		<copy todir="${ver.dir}" file="build.properties" />

		<copy todir="${ver.dir}/docs" filtering="yes">
			<fileset dir="docs" excludes="**/*gif **/*jpg **/*png" />
		</copy>
		<copy todir="${ver.dir}/docs" filtering="no">
			<fileset dir="docs" includes="**/*gif **/*jpg **/*png" />
		</copy>
		<copy todir="${ver.dir}/docs/dev">
			<fileset dir="${build.dir}/docs" />
		</copy>
		<copy todir="${ver.dir}/src">
			<fileset dir="${build.dir}/src" />
		</copy>

		<mkdir dir="${ver.dir}/tests/servertestfiles" />
		<copy todir="${ver.dir}/test/servertestfiles">
			<fileset dir="./test/servertestfiles" />
		</copy>
	</target>

	<target name="fulldist" depends="distbin, distsrc"
			description="full distribution - source and bin"/>
		
	<target name="distbin" depends="build-metacat,war-lsid"
		description="prepares a binary distribution">
		<copy todir="${dist.dir}">
			<fileset dir="./src/scripts" />
		</copy>
		<delete file="./${name}-bin-${release}.zip" />
		<zip zipfile="./${name}-bin-${release}.zip"
			basedir="${dist.dir}" />
		<delete file="./${name}-bin-${release}.tar.gz" />
		<tar tarfile="./${name}-bin-${release}.tar"
			basedir="${dist.dir}" />
		<gzip zipfile="./${name}-bin-${release}.tar.gz"
			src="./${name}-bin-${release}.tar" />
		<delete file="./${name}-bin-${release}.tar" />
	</target>

	<target name="distsrc" depends="dist"
		description="prepares a source distribution">
		<mkdir dir="${ver.src}" />
		<copy todir="${ver.src}">
			<fileset dir="./src" />
		</copy>
		

		<mkdir dir="${ecogrid-dist-dir}" />
		<copy todir="${ecogrid-dist-dir}">
			<fileset dir="${ecogrid-dir}" excludes="**/CVS*" />
		</copy>


		<delete file="./${name}-src-${release}.zip" />
		<zip zipfile="./${name}-src-${release}.zip"
			basedir="${dist.dir}" excludes="metacat*.tar.gz,metacat*.zip" />
		<delete file="./${name}-src-${release}.tar.gz" />
		<tar tarfile="./${name}-src-${release}.tar"
			basedir="${dist.dir}" excludes="metacat*.tar.gz,metacat*.zip" />
		<gzip zipfile="./${name}-src-${release}.tar.gz"
			src="./${name}-src-${release}.tar" />
		<delete file="./${name}-src-${release}.tar" />
		<!--delete dir="${dist.dir}"/ -->
	</target>

	<target name="deb-package" depends="distbin"
		description="create a debian installation package">
		<delete dir="${deb.pkg.dir}" />
		<mkdir dir="${deb.pkg.dir}/DEBIAN" />
		<copy todir="${deb.pkg.dir}/DEBIAN" filtering="yes">
			<fileset dir="./src/scripts/debian"
				includes="control postinst" />
		</copy>

		<mkdir
			dir="${deb.pkg.dir}/usr/share/metacat-${metacat.version}" />
		<copy
			todir="${deb.pkg.dir}/usr/share/metacat-${metacat.version}"
			filtering="yes">
			<fileset dir="./src/scripts/debian"
				excludes="control postinst" />
		</copy>
		<chmod file="${deb.pkg.dir}/DEBIAN/postinst" perm="755" />

		<copy file="${dist.dir}/${metacat.context}.war"
			todir="${deb.pkg.dir}/usr/share/metacat-${metacat.version}" />
		<copy file="./metacat-bin-${metacat.version}.tar.gz"
			tofile="${deb.pkg.dir}/metacat_${metacat.version}.orig.tar.gz" />

		<exec dir="${pkg.dir}" executable="dpkg" os="Linux, Unix"
			failonerror="true">
			<arg line="--build debian" />
		</exec>

		<move file="${pkg.dir}/debian.deb"
			tofile="${pkg.dir}/metacat_${metacat.version}${metacat.releaseCandidate}_all.deb" />
	</target>

	<target name="stylesheettest">
		<xslt in="${input}" out="eml.html"
			style="${style-common-cvsrelpath}/eml-2.0.0/eml-2.0.0.xsl">
			<param name="displaymodule" expression="${displaymodule}" />
			<param name="docid" expression="${input}" />
			<param name="entitytype" expression="${entitytype}" />
			<param name="entityindex" expression="${entityindex}" />
			<outputproperty name="method" value="html" />
			<outputproperty name="standalone" value="yes" />
			<outputproperty name="encoding" value="iso8859_1" />
			<outputproperty name="indent" value="yes" />
		</xslt>
	</target>

	<target name="spatial_option" depends="prepare"
		description=" -- compiles code for the spatial option">

		<echo message="Compiling the metatcat shapefile creator" />
		<echo message="using the shapelib at: ${shapelib.dir}" />
		<exec dir="." executable="g++" os="Linux, Unix"
			failonerror="true">
			<arg
				line="./src/spatial/cpp/metacat_shapefile.cpp -I ${shapelib.dir} -c -o build/metacat_shapefile.o" />
		</exec>

		<exec dir="." executable="g++" os="Linux, Unix"
			failonerror="true">
			<arg
				line="build/metacat_shapefile.o ${shapelib.dir}/.libs/libshp.a -o bin/metacat_shapefile" />
		</exec>
	</target>

	<!-- LSID Authority support -->
	<patternset id="lsid.jars">
		<include name="axis.jar" />
		<include name="commons-discovery-0.2.jar" />
		<include name="jaxrpc.jar" />
		<include name="lsid-client-1.1.1.jar" />
		<include name="lsid-server-1.1.1.jar" />
		<include name="saaj.jar" />
		<include name="wsdl4j-1.5.1.jar" />
		<include name="activation.jar" />
		<include name="castor-0.9.5.jar" />
		<include name="dnsjava-1.3.2.jar" />
		<include name="mail.jar" />
		<include name="commons-logging-1.0.4.jar" />
		<!-- These jars may be needed but seem to not actually be,
			so leaving them out for now
			<include name="axis-ant.jar" />
		-->
		<!--<include name="GenCastor.class" />-->
	</patternset>
	<patternset id="lib.jars">
		<include name="log4j-1.2.12.jar" />
		<include name="utilities-*.jar" />
		<include name="xerces*.jar" />
		<include name="xalan*.jar" />
		<include name="xml-apis*.jar" />
	</patternset>

	<path id="lsid.classpath">
		<fileset dir="${lsid.lib.dir}">
			<patternset refid="lsid.jars" />
		</fileset>
		<fileset dir="${lib.dir}">
			<patternset refid="lib.jars" />
		</fileset>
		<fileset dir="${build.dir}">
			<include name="metacat-client.jar" />
			<include name="metacat.jar" />
		</fileset>
	</path>

	<filterset id="configFilters">
		<!-- MCD BYE filter token="LSID_AUTHORITY_HOSTNAME"
			value="${config.hostname}" / -->
		<!-- MCD BYE filter token="LSID_AUTHORITY_PORT"
			value="${config.port}" / -->
		<!-- MCD BYE filter token="METADATA_LABELS"
			value="${config.metadataLabelLsid}" / -->
		<!-- MCD BYE filter token="METACAT_SERVER"
			value="${config.metacatserver}" / -->
		<!-- MCD BYE filter token="LSID_AUTHORITY_STRING"
			value="${config.lsidauthority}" / -->
	</filterset>

	<target name="prepare-lsid" depends="prepare,clientjar"
		description="Configure files prior to compilation">
		<mkdir dir="${lsid.build.dir}" />
		<!-- Copy the properties file into the build -->
		<copy file="${conf.dir}/metacat-lsid.properties"
			tofile="${lsid.build.dir}/WEB-INF/classes/metacat-lsid.properties"
			overwrite="true">
			<filterset refid="configFilters" />
		</copy>
		<copy file="${conf.dir}/log4j.properties"
			tofile="${lsid.build.dir}/WEB-INF/classes/log4j.properties"
			overwrite="true">
			<filterset refid="configFilters" />
		</copy>
		<!-- Copy config files into the build -->
		<copy todir="${lsid.build.dir}/WEB-INF">
			<fileset dir="${webinf.dir}" includes="**/*.wsdd" />
		</copy>
		<!-- Copy the metadata configuration files into the build -->
		<mkdir
			dir="${lsid.build.dir}/WEB-INF/classes/${lsid.classes.dir}" />
		<copy
			todir="${lsid.build.dir}/WEB-INF/classes/${lsid.classes.dir}">
			<fileset dir="${conf.dir}" includes="**/*.xml" />
			<fileset dir="${conf.dir}" includes="**/*.xslt" />
			<filterset refid="configFilters" />
		</copy>
		<!-- Copy services files into the build -->
		<mkdir dir="${lsid.build.dir}/services" />
		<copy todir="${lsid.build.dir}/services">
			<fileset dir="${services.dir}" />
			<filterset refid="configFilters" />
		</copy>
		<!-- Copy axis files into the build -->
		<mkdir dir="${lsid.build.dir}" />
		<copy todir="${lsid.build.dir}">
			<fileset dir="${conf.dir}/axis" excludes="*.properties" />
		</copy>
		<mkdir dir="${lsid.build.dir}/WEB-INF/classes" />
		<copy todir="${lsid.build.dir}/WEB-INF/classes">
			<fileset dir="${conf.dir}/axis" includes="*.properties" />
		</copy>
	</target>

	<target name="compile-lsid" depends="prepare-lsid"
		description="Compile Java sources">
		<mkdir dir="${lsid.build.dir}/WEB-INF/classes" />
		<javac srcdir="src/edu/ucsb/nceas/metacat/lsid"
			destdir="${lsid.build.dir}/WEB-INF/classes" debug="${compile.debug}"
			deprecation="${compile.deprecation}"
			target="${java.target.version}"
			source="${java.source.version}"
			optimize="${compile.optimize}">
			<classpath>
				<path refid="compile.classpath" />
				<fileset dir="${build.dir}">
					<include name="${name}.jar" />
				</fileset>
			</classpath>
		</javac>
	</target>

	<target name="war-lsid" depends="compile-lsid"
		description="Create a war file for the application">
		<mkdir dir="${dist.dir}" />
		<war destfile="${dist.dir}/${authority.context}.war"
			webxml="${webinf.dir}/web.xml">
			<fileset dir="${lsid.build.dir}" />
			<lib dir="${lsid.lib.dir}">
				<patternset refid="lsid.jars" />
			</lib>
			<lib dir="${lib.dir}">
				<patternset refid="lib.jars" />
			</lib>
			<lib dir="${lib.dir}">
				<include name="xalan.jar" />
				<include name="xml-apis.jar" />
			</lib>
			<lib dir="${build.dir}">
				<include name="metacat-client.jar" />
			</lib>
		</war>
	</target>

	<target name="deploy-lsid" depends="war-lsid"
		description="Deploy LSID war to servlet container">
		<delete dir="${app.deploy.dir}/${authority.context}" />
		<delete file="${app.deploy.dir}/${authority.context}.war" />
		<mkdir dir="${app.deploy.dir}" />
		<copy todir="${app.deploy.dir}">
			<fileset dir="${dist.dir}" />
		</copy>
	</target>
	
	<target name="change-metacat-properties" depends="warPrepare"
        description="Chage some default values of metacat.properties">
       <echo file="${metacat-properties-file}" append="true">
		   configutil.propertiesConfigured=true
		   configutil.authConfigured=true
           configutil.skinsConfigured=true
		   configutil.databaseConfigured=true
		   configutil.geoserverConfigured=true
	   </echo>
  </target>
	
	<!-- This target will use default values in svn metacat.properties to build a configured 
		metacat (except configuti.* properties, they will be set true). Those default settings
		are for a test machine. It may not work on your system-->
	<target name="install-configured-metacat" depends="change-metacat-properties, install"
        description="Install a metacat by the default value in metacat.properties without additional configutaion">
    </target>
	
	<!-- build metacat-common jar -->
	<target name="build-metacat-common" description="Calls the Maven build for metacat-common jar" unless="build-metacat-common-called" >
		<artifact:mvn pom="metacat-common/pom.xml" mavenhome="${maven.home}" fork="true">
		            <arg value="clean"/>
		</artifact:mvn>
		<artifact:mvn pom="metacat-common/pom.xml" mavenhome="${maven.home}" fork="true">
		   <arg value="install"/>
		</artifact:mvn>
		<property name="build-metacat-common-called" value="true"/>
	</target>

	<!-- build metacat-index war -->
	<target name="build-metacat-index" description="Calls the Maven build for metacat-index.war" >		
		<artifact:mvn pom="metacat-index/pom.xml" mavenhome="${maven.home}" fork="true">
			<arg value="clean"/>
		</artifact:mvn>
		<artifact:mvn pom="metacat-index/pom.xml" mavenhome="${maven.home}" fork="true">
			<arg value="package"/>
			<!--<arg value="-Dmaven.test.skip=true"/>-->
		</artifact:mvn>
	</target>
	
	<target name="dist-metacat-index" depends="init, build-metacat-index" description="Copy metacat-index.war to dist folder" >		
		<copy tofile="${dist.dir}/metacat-index.war" >
			<fileset dir="metacat-index/target" includes="metacat-index*.war"></fileset>
		</copy>	
	</target>
	
	<target name="install-metacat-index" depends="dist-metacat-index" description="Copy metacat-index.war to deploy folder" >		
		<copy todir="${app.deploy.dir}" file="${dist.dir}/metacat-index.war" />
	</target>
	
	<!-- Generate a light war file which only is used to manage the ldap user accounts - register a new user, reset and change the password -->
	<target name="war-identity" depends="warPrepare" description="Generate a light war file which only is used to manage the ldap user accounts - register a new user, reset and change the password">
		  <property name="war-name" value="identity" />
		  <mkdir dir="${dist.dir}" />
		     <war destfile="${dist.dir}/${war-name}.war"
		            webxml="lib/account-web-info/web.xml">
		      <webinf dir="${war.webinf}">
		        <include name="metacat.properties"/>
		        <include name="gd_intermediate_bundle_nceas_ldap.crt"/>
		      </webinf>
		      <fileset dir="${war.context}">
		        <include name="cgi-bin/**"/>
		      	<include name="style/**"/>  
		      </fileset>
		      
		   </war>
	</target>
	
</project>