Started by an SCM change55233427f03610694d2a865e6748bcf8bfb51be900233427f03610694d2a865e6748bcf8bfb51be900refs/remotes/origin/master233427f03610694d2a865e6748bcf8bfb51be900233427f03610694d2a865e6748bcf8bfb51be900refs/remotes/origin/master233427f03610694d2a865e6748bcf8bfb51be900233427f03610694d2a865e6748bcf8bfb51be900refs/remotes/origin/masterhttps://github.com/NCEAS/eml.gitfalse#551850928286emlparser-unstable #5555false554263FAILURE1568336014975http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcode/my-views/view/All/job/emlparser-unstable/55/.projectpom.xml6c95904dd1c5c0d7ed123a6de3df1ea22f2765591446837855000http://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderleinfelder@nceas.ucsb.edumaking branch for 0.9.x datamanager library 2015-11-06 19:24:15 +00006c95904dd1c5c0d7ed123a6de3df1ea22f276559making branch for 0.9.x datamanager libraryadd.projecteditpom.xmlxsd/stmml.xsdxsd/eml-entity.xsdeml-project.xsdeml-physical.xsdxsd/eml-spatialVector.xsdimg/eml-dataset.pngeml-spatialRaster.xsdeml-access.pngxsd/eml-software.xsdimg/eml-entity.pngxsd/eml-physical.xsdimg/eml-spatialReference.pngeml-software.xsdxsd/eml-attribute.xsdeml-constraint.pngeml-attribute.xsdeml-spatialVector.xsdxsd/eml-spatialRaster.xsdeml-dataset.pngimg/eml-resource.pngeml-entity.xsdeml-coverage.xsdimg/eml-dataTable.pngeml-project.pngeml.pngxsd/eml-unitTypeDefinitions.xsdeml-literature.pngeml-spatialRaster.pngimg/eml-software.pngeml-access.xsdeml-resource.pngeml-protocol.pngxsd/eml-literature.xsdxsd/eml-dataTable.xsdeml-storedProcedure.xsdeml-dataTable.xsdxsd/eml-access.xsdimg/eml-physical.pngimg/eml-view.pngeml-software.pngeml-physicalDistribution.pngeml-attribute.pngeml-unitTypeDefinitions.xsdeml-constraint.xsdeml-spatialVector.pngxsd/eml-documentation.xsdeml-documentation.xsdimg/eml-constraint.pngimg/eml-text.pngimg/eml-storedProcedure.pngeml-entity.pngxsd/eml-view.xsdeml-methods.xsdeml-coverage.pngxsd/eml-text.xsdimg/eml-methods.pngeml.xsdeml-literature.xsdxsd/eml-dataset.xsdeml-spatialReference.pngxsd/eml-spatialReference.xsdeml-resource.xsdeml-protocol.xsdeml-view.xsdeml-text.pngeml-storedProcedure.pngeml-dataTable.pngeml-party.xsdxsd/eml-storedProcedure.xsdxsd/eml-protocol.xsdimg/eml-physicalDistribution.pngxsd/eml-project.xsdimg/eml-coverage.pngeml-methods.pngxsd/eml-constraint.xsdimg/eml-protocol.pngeml-physical.pngeml-spatialReference.xsdimg/eml.pngeml-view.pngeml-text.xsdimg/eml-spatialVector.pngeml-party.pngstmml.xsdxsd/eml-resource.xsdxsd/eml-coverage.xsdeml-dataset.xsdimg/eml-attribute.pngimg/eml-spatialRaster.pngimg/eml-project.pngimg/eml-party.pngimg/eml-literature.pngimg/eml-access.pngxsd/eml-party.xsdxsd/eml.xsdxsd/eml-methods.xsd79b66ac29d5f9df62ea82f93148e95c46d2c88841494028577000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgiMove schema files to xsd directory, and images to img directory. 2017-05-05 15:56:17 -080079b66ac29d5f9df62ea82f93148e95c46d2c8884iMove schema files to xsd directory, and images to img directory.deleteeml-dataset.pngdeleteeml-text.xsdaddxsd/eml-text.xsdaddxsd/stmml.xsddeleteeml-entity.pngdeleteeml-coverage.xsdaddimg/eml-physicalDistribution.pngaddxsd/eml-documentation.xsddeleteeml-protocol.xsddeletestmml.xsdaddimg/eml-party.pngaddimg/eml-resource.pngdeleteeml-view.pngdeleteeml-literature.xsdaddimg/eml-spatialReference.pngaddimg/eml-spatialVector.pngdeleteeml-dataTable.pngdeleteeml-methods.pngdeleteeml-spatialRaster.pngdeleteeml-project.xsdaddxsd/eml-project.xsddeleteeml-attribute.pngaddimg/eml-access.pngaddxsd/eml-storedProcedure.xsdaddimg/eml-constraint.pngaddimg/eml-methods.pngaddxsd/eml-view.xsddeleteeml-physicalDistribution.pngaddimg/eml-protocol.pngdeleteeml-physical.pngdeleteeml-documentation.xsdaddimg/eml-physical.pngdeleteeml-project.pngaddimg/eml-text.pngdeleteeml-coverage.pngaddimg/eml-attribute.pngdeleteeml-view.xsdaddimg/eml-entity.pngaddimg/eml-storedProcedure.pngaddxsd/eml-entity.xsddeleteeml-software.xsdaddxsd/eml-protocol.xsddeleteeml-unitTypeDefinitions.xsdaddxsd/eml-dataset.xsddeleteeml-storedProcedure.pngdeleteeml-party.pngdeleteeml-constraint.pngdeleteeml-methods.xsdaddimg/eml-project.pngaddimg/eml.pngaddxsd/eml-software.xsdaddimg/eml-view.pngaddxsd/eml-unitTypeDefinitions.xsdaddxsd/eml-coverage.xsddeleteeml-software.pngaddimg/eml-software.pngaddxsd/eml-access.xsddeleteeml-dataset.xsddeleteeml-attribute.xsdaddxsd/eml-spatialRaster.xsddeleteeml-access.xsddeleteeml.xsdaddxsd/eml-spatialVector.xsdaddxsd/eml-constraint.xsdaddimg/eml-coverage.pngdeleteeml-resource.pngdeleteeml.pngdeleteeml-protocol.pngdeleteeml-physical.xsddeleteeml-text.pngaddxsd/eml-attribute.xsddeleteeml-spatialVector.xsdaddxsd/eml-resource.xsddeleteeml-spatialRaster.xsdaddimg/eml-dataTable.pngdeleteeml-literature.pngdeleteeml-spatialReference.pngaddxsd/eml-literature.xsdaddxsd/eml-party.xsdaddxsd/eml.xsddeleteeml-storedProcedure.xsdaddimg/eml-literature.pngdeleteeml-constraint.xsddeleteeml-entity.xsdaddimg/eml-dataset.pngdeleteeml-resource.xsdaddxsd/eml-dataTable.xsddeleteeml-spatialReference.xsdaddimg/eml-spatialRaster.pngdeleteeml-party.xsdaddxsd/eml-methods.xsdaddxsd/eml-physical.xsdaddxsd/eml-spatialReference.xsddeleteeml-spatialVector.pngdeleteeml-dataTable.xsddeleteeml-access.pngxsd/eml-text.xsdxsd/eml-entity.xsdxsd/eml-dataset.xsdxsd/eml-spatialReference.xsdxsd/eml-spatialVector.xsdbuildDocBook.xslxsd/eml-software.xsdxsd/eml-physical.xsdxsd/eml-protocol.xsdxsd/eml-storedProcedure.xsdxsd/eml-attribute.xsdxsd/eml-project.xsdxsd/eml-spatialRaster.xsdxsd/eml-constraint.xsdxsd/eml-unitTypeDefinitions.xsdeml-documentation.xslbuildDependencyTable.xslxsd/eml-literature.xsdxsd/eml-dataTable.xsdxsd/eml-access.xsdstyle/eml/eml.xslREADME.mdxsd/eml-resource.xsdxsd/eml-coverage.xsdeml-spatialReferenceDictionary.xmlxsd/eml-party.xsdxsd/eml-documentation.xsdbuild.xmlxsd/eml.xsdxsd/eml-methods.xsdxsd/eml-view.xsdef773b33b9d2c8484e5fc8c5af49fe5f108e40161494033009000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRefactor build to switch to 2.2.0 version. This includes fixes to docbook generation for the new xsd and img directory structures, and updatting the eml-spatialReferenceDictionary.xml to use the 2.2.0 namespace (partial fix for issu #264). 2017-05-05 17:10:09 -0800ef773b33b9d2c8484e5fc8c5af49fe5f108e4016Refactor build to switch to 2.2.0 version.editxsd/eml-attribute.xsdeditxsd/eml-party.xsdeditxsd/eml-spatialReference.xsdeditxsd/eml-unitTypeDefinitions.xsdeditxsd/eml-project.xsdeditxsd/eml-documentation.xsdeditxsd/eml-text.xsdeditxsd/eml-software.xsdeditxsd/eml-resource.xsdeditxsd/eml-methods.xsdeditxsd/eml-protocol.xsdeditxsd/eml-dataset.xsdeditxsd/eml-entity.xsdeditxsd/eml-storedProcedure.xsdeditxsd/eml-spatialVector.xsdediteml-spatialReferenceDictionary.xmleditbuild.xmlediteml-documentation.xsleditxsd/eml-spatialRaster.xsdeditxsd/eml-access.xsdeditxsd/eml-coverage.xsdeditxsd/eml-physical.xsdeditxsd/eml-view.xsdeditxsd/eml-literature.xsdeditREADME.mdeditbuildDependencyTable.xsleditxsd/eml-constraint.xsdeditxsd/eml.xsdeditbuildDocBook.xsleditxsd/eml-dataTable.xsdeditstyle/eml/eml.xsleml-party.xsd62b60f9f755dd118a3f20029c816c5baf52c78ce1495074297000http://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishpetridish@gmail.comChange usage of personnel to individuals Because the word personnel connotes employment at an organization, I think a more inclusive term should be used. This is related to expanding the the document of userId/directory for web identifiers such as ORCID in #260. 2017-05-17 18:24:57 -080062b60f9f755dd118a3f20029c816c5baf52c78ceChange usage of personnel to individualsediteml-party.xsdeml-party.xsde55f8948a5d33d48038afe2de7ab1de8206f58421495074315000http://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishpetridish@gmail.comFix a minor typo 2017-05-17 18:25:15 -0800e55f8948a5d33d48038afe2de7ab1de8206f5842Fix a minor typoediteml-party.xsdeml-party.xsd03f42d02767f36aa021c42104c58767d9caefde81495074776000http://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishpetridish@gmail.comAdd ORCID to the examples for userid/directory Addresses #260 2017-05-17 18:32:56 -080003f42d02767f36aa021c42104c58767d9caefde8Add ORCID to the examples for userid/directoryediteml-party.xsdremoveAnnotation.pldedd0d0f60aedf5295cb3ff00bfff2a5d0db41f41495575039000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRemoving unneeded perl script for stripping annotations. Use the more effective XSLT instead. 2017-05-23 14:30:39 -0700dedd0d0f60aedf5295cb3ff00bfff2a5d0db41f4Removing unneeded perl script for stripping annotations.deleteremoveAnnotation.plremoveAnnotation.xslbuild.xmlstyle/removeAnnotation.xsl746d46d6f88431ddb09a091f4a1f9e5b090438451495575121000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgMove removeAnnotation.xsl into the style directory. 2017-05-23 14:32:01 -0700746d46d6f88431ddb09a091f4a1f9e5b09043845Move removeAnnotation.xsl into the style directory.deleteremoveAnnotation.xsleditbuild.xmladdstyle/removeAnnotation.xslmembers.mdeml-faq.xmlbuild.xmlmembers.xmlmembers.xslindex.html676d5a5a29ce4398c07e2e2715905492c88062fc1499356614000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgConverted members.xml to Markdown format (members.md). 2017-07-06 07:56:54 -0800676d5a5a29ce4398c07e2e2715905492c88062fcConverted members.xml to Markdown format (members.md).editeml-faq.xmldeletemembers.xmldeletemembers.xsleditbuild.xmleditindex.htmladdmembers.mdxsd/eml-semantics.xsd1dacda89507c344a4e26c27b0f9d7df30b3ab21e1499359985000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFirst draft of an eml-semantics module. Still needs to be incorporated into other elements within EML. 2017-07-06 08:53:05 -08001dacda89507c344a4e26c27b0f9d7df30b3ab21eFirst draft of an eml-semantics module.addxsd/eml-semantics.xsdmembers.md9179ed04ead6a77dd4603474a0a936d1c2674ade1499409128000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comFix markdown syntax on members table. 2017-07-06 23:32:08 -07009179ed04ead6a77dd4603474a0a936d1c2674adeFix markdown syntax on members table.editmembers.mdxsd/eml-semantics.xsd2c589cee5bf595144ebec4dcd467fe2cecd671491500866220000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRemove extraneous attributes, and unneeded `choice`. The `SemanticAnnotation` type was difined as a sequence nested inside of a choice, which was not needed. See issue #25. 2017-07-23 20:17:00 -07002c589cee5bf595144ebec4dcd467fe2cecd67149Remove extraneous attributes, and unneeded `choice`.editxsd/eml-semantics.xsdxsd/eml-entity.xsdxsd/eml-semantics.xsdxsd/eml-attribute.xsdxsd/eml-resource.xsd8376bd10aa6865ea92ff16441c2e06173c7c7e561500871915000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded `annotation` fields for attribute, EntityGroup, and ResourceGroup. Continuing work on issue #25, added in fields of type sem:SemanticAnnotation in three key schemas. 2017-07-23 21:51:55 -07008376bd10aa6865ea92ff16441c2e06173c7c7e56Added `annotation` fields for attribute, EntityGroup, and ResourceGroup.editxsd/eml-attribute.xsdeditxsd/eml-entity.xsdeditxsd/eml-resource.xsdeditxsd/eml-semantics.xsdsrc/test/resources/eml-sample.xml8c0b3455c3442fe48d7b24cc673411b3fd21d8bb1500872029000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded annotation fields to example document. Continuing work on issue #25, this commit now allows the new annotation fields to be demonstrated. The eml-sample.xml document validates using xerces. 2017-07-23 21:53:49 -07008c0b3455c3442fe48d7b24cc673411b3fd21d8bbAdded annotation fields to example document.editsrc/test/resources/eml-sample.xmleml-spatialReferenceDictionary.xmlbe79f1a97e805b6585ae0c210e017b12bd0dac191500881697000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRename `gradient` to `grad`s. This is to follow the change in unit names that was made years ago, and has been a latent bug in the file since then. This fix closes #264. 2017-07-24 00:34:57 -0700be79f1a97e805b6585ae0c210e017b12bd0dac19Rename `gradient` to `grad`s.editeml-spatialReferenceDictionary.xmlxsd/eml-dataset.xsde738422cdd78caf3d8e8b253c94f75021fe078891500882279000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded 'unknown' to the maintainence frequency list to fix spelling error. The original misspelled value was kept for compatibility. This will close issue #267. 2017-07-24 00:44:39 -0700e738422cdd78caf3d8e8b253c94f75021fe07889Added 'unknown' to the maintainence frequency list to fix spellingeditxsd/eml-dataset.xsdxsd/eml.xsd393f859214f80cd279be3ef54398783ae13958ca1500883998000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded modern packageId examples (DOI, UUID) to docs. 2017-07-24 01:13:18 -0700393f859214f80cd279be3ef54398783ae13958caAdded modern packageId examples (DOI, UUID) to docs.editxsd/eml.xsdREADME.mdac5d9d2f6ed3b74903a9fbc785a4f441b2be88281500885128000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd notice about release statis of 2.2.0. 2017-07-24 01:32:08 -0700ac5d9d2f6ed3b74903a9fbc785a4f441b2be8828Add notice about release statis of 2.2.0.editREADME.mdxsd/eml-project.xsdother/registry.rdf772a0964eb62c9fd2baf5518777395a013b6dca31500961712000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded `award` field. Added first version of a new `award` field to the eml-project schema to add info that can be used to reference funding information for the projet. This provides the first implementation of the `award` field, including the award title, identifier, and open funder registry identifier. These proposed additions are partial implementations for issue #266. 2017-07-24 22:48:32 -0700772a0964eb62c9fd2baf5518777395a013b6dca3Added `award` field.addother/registry.rdfeditxsd/eml-project.xsdxsd/eml-project.xsda31aec1f213aba9776dc3033552aaa7a8a46c6591504915009000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdated documentation for award fields. 2017-09-08 15:56:49 -0800a31aec1f213aba9776dc3033552aaa7a8a46c659Updated documentation for award fields.editxsd/eml-project.xsdlib/sample/eml-sample.xml751e1869df64aa5e7305c15314d806e99245eb581504918035000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgSwitch sample doc to use 2.2.0 namespace. Document validates. 2017-09-08 16:47:15 -0800751e1869df64aa5e7305c15314d806e99245eb58Switch sample doc to use 2.2.0 namespace.editlib/sample/eml-sample.xmllib/sample/eml-sample.xml5ce01c94ed5298f6fee8b7f4beb4e33c6b7c1ea81504918810000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd 'award' element as part of sample.xml as an example. 2017-09-08 17:00:10 -08005ce01c94ed5298f6fee8b7f4beb4e33c6b7c1ea8Add 'award' element as part of sample.xml as an example.editlib/sample/eml-sample.xmlxsd/eml-dataset.xsdc32cbe942ed17bca2e80bb4d6ee874af849675321504919612000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdjusted documentation on the 'purpose' field to indicate that it is used to provide a data synopsis as needed. 2017-09-08 17:13:32 -0800c32cbe942ed17bca2e80bb4d6ee874af84967532Adjusted documentation on the 'purpose' field to indicate that it iseditxsd/eml-dataset.xsdxsd/eml-dataset.xsd063bda9edf38d0dd1de3adfb496ce5801a502bf91504920208000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgrenamed citation to usageCitation to reflect comments in issue #259. Also updated the definition to reflect the intended purpose of the field. 2017-09-08 17:23:28 -0800063bda9edf38d0dd1de3adfb496ce5801a502bf9renamed citation to usageCitation to reflect comments in issue #259.editxsd/eml-dataset.xsdeml-faq.xmlindex.html002921b709d6a300cb47399f7c788e990ee808cb1506643019000http://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishpetridish@gmail.comFix outdated references to SVN and listserv 2017-09-28 15:56:59 -0800002921b709d6a300cb47399f7c788e990ee808cbFix outdated references to SVN and listserveditindex.htmlediteml-faq.xmlbuildDocBook.xsl7ae63c78cd363840a8d1e4520bac590f29051e861506643035000http://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishpetridish@gmail.comFix XML syntax errors in internationalization example 2017-09-28 15:57:15 -08007ae63c78cd363840a8d1e4520bac590f29051e86Fix XML syntax errors in internationalization exampleeditbuildDocBook.xslbuildDocBook.xslb3efd4192dd5f9421abdbf0b3251fcfa83abc7d51506644380000http://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishpetridish@gmail.comFix invalid lang codes in internationalization example 2017-09-28 16:19:40 -0800b3efd4192dd5f9421abdbf0b3251fcfa83abc7d5Fix invalid lang codes in internationalization exampleeditbuildDocBook.xslREADME.md20bdb1a5720178026651c025b90838992e712f431509397192000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded task board to README. 2017-10-30 12:59:52 -080020bdb1a5720178026651c025b90838992e712f43Added task board to README.editREADME.md.travis.yaml287c3bcbb7d87524ad774278410b9f3ce81e618a1509427320000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgSimple travis build 2017-10-30 21:22:00 -0800287c3bcbb7d87524ad774278410b9f3ce81e618aSimple travis buildadd.travis.yaml.travis.yaml.travis.ymla2ec122a1d4f3b17feb092e9574f363b0a6741101509427549000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgSwitch travis to language generic to avoid ruby build. 2017-10-30 21:25:49 -0800a2ec122a1d4f3b17feb092e9574f363b0a674110Switch travis to language generic to avoid ruby build.delete.travis.yamladd.travis.ymlREADME.mdcbdc86fcf212aa776749c04ac2aca1a75db275aa1509429342000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgTravis badge 2017-10-30 21:55:42 -0800cbdc86fcf212aa776749c04ac2aca1a75db275aaTravis badgeeditREADME.mdeml-documentation.xslxsd/eml.xsd1ff36182cda5a0530ada6e9c0095c2a967e81b1d1509430140000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgStandardize protocol namespace to 'pro'. Closes #230. 2017-10-30 22:09:00 -08001ff36182cda5a0530ada6e9c0095c2a967e81b1dStandardize protocol namespace to 'pro'.editeml-documentation.xsleditxsd/eml.xsdsortDocBook.xsleml-faq.xmlbuildDocBook.xsleml-211info.xmleml-210info.xmlf24b8780b5418e56dc452be391f76216b280a53c1512872514000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgModified build to allow building docs offline. Previous docs made references to DTD files on OASIS servers. Removed so that the build can work offline. DTD DOCTYPE references seem superfluous for our purposes. 2017-12-09 17:21:54 -0900f24b8780b5418e56dc452be391f76216b280a53cModified build to allow building docs offline.editeml-faq.xmleditsortDocBook.xsleditbuildDocBook.xslediteml-211info.xmlediteml-210info.xmlxsd/eml-semantics.xsdxsd/eml-entity.xsdxsd/eml-attribute.xsdxsd/eml-resource.xsdd1a8c74ed9c4baa5a7da3c4cd0d4d01520f10e941515026491000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd new elements for propertyURI and propertyLabel. Also, rename the termURI to valueURI, to reflect its use as the value of a property. 2018-01-03 15:41:31 -0900d1a8c74ed9c4baa5a7da3c4cd0d4d01520f10e94Add new elements for propertyURI and propertyLabel.editxsd/eml-semantics.xsdeditxsd/eml-attribute.xsdeditxsd/eml-resource.xsdeditxsd/eml-entity.xsdsrc/test/resources/eml-semantics.xmlffba2d9cb7b33333ff31d3a594f5c5ba1683c6431515030428000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded EML semantics example document. 2018-01-03 16:47:08 -0900ffba2d9cb7b33333ff31d3a594f5c5ba1683c643Added EML semantics example document.addsrc/test/resources/eml-semantics.xmlsrc/test/resources/eml-sample.xml083d6d1f210c60bfbf4cc1fae6dec08bcc46f5881515033032000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded more complete annotation example. 2018-01-03 17:30:32 -0900083d6d1f210c60bfbf4cc1fae6dec08bcc46f588Added more complete annotation example.editsrc/test/resources/eml-sample.xmlxsd/eml-project.xsd591af29329bb2bc5b0f38731a1fab7c7526015ad1515721078000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgImproved documentation for personnel element. Reference issue #281. 2018-01-11 16:37:58 -0900591af29329bb2bc5b0f38731a1fab7c7526015adImproved documentation for personnel element.editxsd/eml-project.xsdxsd/eml-text.xsdxsd/eml-resource.xsdxsd/eml.xsdxsd/xml.xsd2979d5ccf2ef4109ab830a505e5565709deb10b01518136240000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd a local copy of xml.xsd. The version 2.1.1 internationalization changes introduced the need for adding the xml.xsd file to support `xml:lang` attributes on internationalized text strings. However, the schema import pointed at a network location of the schema file, which prevents validation when offline. Adding xml.xsd to the schema dir and referencing the local copy allows offline validation to succeed and prevents injection attacks on the remote schema file. Need to verify that this is the right version of xml.xsd. 2018-02-08 15:30:40 -09002979d5ccf2ef4109ab830a505e5565709deb10b0Add a local copy of xml.xsd.editxsd/eml.xsdeditxsd/eml-resource.xsdaddxsd/xml.xsdeditxsd/eml-text.xsdsrc/test/resources/eml-sample.xmlxsd/eml-project.xsdeb4ed60f96ed8ce563406816ef1ccbb568b81a2e1518136320000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUse EML-style camel case field names for `AwardType`. Also, add an example of the new `award` element. 2018-02-08 15:32:00 -0900eb4ed60f96ed8ce563406816ef1ccbb568b81a2eUse EML-style camel case field names for `AwardType`.editsrc/test/resources/eml-sample.xmleditxsd/eml-project.xsdmembers.md869ebdfcc52da82829f5304cec550b9f6a8525961518137354000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFixed spelling in members file. 2018-02-08 15:49:14 -0900869ebdfcc52da82829f5304cec550b9f6a852596Fixed spelling in members file.editmembers.mdsrc/test/resources/eml-software.xmlsrc/test/resources/eml-literatureInPress.xmlsrc/test/resources/eml-physical-inline.xmlsortDocBook.xslsrc/test/resources/eml-offline.xmlbuildDocBook.xslsrc/test/resources/eml-access.xmlsrc/test/resources/eml-semantics.xmlsrc/test/resources/eml-datasetWithAccess.xmlsrc/test/resources/eml-attribute.xmlsrc/test/resources/eml-view.xmlsrc/test/resources/eml-datasetWithCitation.xmlsrc/test/resources/eml-project.xmlsrc/test/resources/eml-i18n.xmlsrc/test/resources/eml-protocol.xmlsrc/test/resources/eml-physical.xmlsrc/test/resources/eml-inline.xmlsrc/test/resources/eml.xmlsrc/main/java/org/ecoinformatics/eml/SAXValidate.javasrc/test/resources/eml-entity.xmlsrc/test/resources/eml-datasetGringpoint.xmlsrc/test/resources/eml-dataset.xmlsrc/test/resources/eml-text.xmlsrc/test/resources/eml-datasetWithNonwordCharacters.xmlsrc/test/resources/eml-method.xmlsrc/test/resources/eml-datasetWithAttributelevelMethods.xmlsrc/test/resources/eml-datasetWhitespacePatterns.xmlsrc/test/resources/eml-citationWithContact.xmlsrc/test/resources/eml-physical-inline-cdatasection.xmlsrc/test/resources/eml-datasetWithAccessOverride.xmlsrc/test/resources/eml-sample.xmlsrc/test/resources/eml-softwareWithAcessDistribution.xmlsrc/test/resources/eml-citationWithContactReference.xmlsrc/test/resources/eml-dataTable.xmlsrc/test/resources/eml-datasetWithUnits.xmlsrc/test/resources/eml-storedProcedure.xmlsrc/test/resources/eml-literature.xmlsrc/test/resources/eml-datasetGRing.xmlsrc/test/resources/eml-datasetWithAccessUnitsLiteralLayout.xmlsrc/test/resources/eml-spatialVector.xmlsrc/test/resources/eml-datasetMultipleDistribution.xmlsrc/test/resources/eml-party.xmlsrc/test/resources/eml-unitDictionary.xmlaca06e62771eabc7d44c0b6618068b1a409a63dc1518166253000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgModified docbook and test resources to validate and pass tests. 2018-02-08 23:50:53 -0900aca06e62771eabc7d44c0b6618068b1a409a63dcModified docbook and test resources to validate and pass tests.editsrc/test/resources/eml-dataTable.xmleditsrc/test/resources/eml-literature.xmleditsrc/test/resources/eml-text.xmleditsrc/test/resources/eml-entity.xmleditsortDocBook.xsleditsrc/test/resources/eml-project.xmleditsrc/test/resources/eml-datasetWithAttributelevelMethods.xmleditsrc/test/resources/eml-software.xmleditsrc/test/resources/eml-datasetWhitespacePatterns.xmleditsrc/test/resources/eml.xmleditsrc/test/resources/eml-datasetGringpoint.xmleditsrc/test/resources/eml-citationWithContactReference.xmleditsrc/test/resources/eml-semantics.xmleditsrc/test/resources/eml-inline.xmleditsrc/test/resources/eml-offline.xmleditsrc/test/resources/eml-datasetGRing.xmleditsrc/test/resources/eml-datasetWithAccessUnitsLiteralLayout.xmleditsrc/test/resources/eml-sample.xmleditsrc/test/resources/eml-physical-inline-cdatasection.xmleditsrc/test/resources/eml-protocol.xmleditsrc/main/java/org/ecoinformatics/eml/SAXValidate.javaeditsrc/test/resources/eml-attribute.xmleditsrc/test/resources/eml-datasetWithUnits.xmleditsrc/test/resources/eml-datasetWithAccessOverride.xmleditsrc/test/resources/eml-view.xmleditsrc/test/resources/eml-literatureInPress.xmleditsrc/test/resources/eml-datasetWithAccess.xmleditsrc/test/resources/eml-physical-inline.xmleditsrc/test/resources/eml-spatialVector.xmleditsrc/test/resources/eml-datasetWithNonwordCharacters.xmleditsrc/test/resources/eml-unitDictionary.xmleditsrc/test/resources/eml-datasetWithCitation.xmleditsrc/test/resources/eml-softwareWithAcessDistribution.xmleditsrc/test/resources/eml-access.xmleditsrc/test/resources/eml-i18n.xmleditsrc/test/resources/eml-party.xmleditbuildDocBook.xsleditsrc/test/resources/eml-datasetMultipleDistribution.xmleditsrc/test/resources/eml-citationWithContact.xmleditsrc/test/resources/eml-physical.xmleditsrc/test/resources/eml-method.xmleditsrc/test/resources/eml-storedProcedure.xmleditsrc/test/resources/eml-dataset.xmlsrc/test/resources/eml-party.xmlc54463f60330fa601e0e446000aa09387fc1a75d1518206727000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate eml-party test example with ORCID. 2018-02-09 11:05:27 -0900c54463f60330fa601e0e446000aa09387fc1a75dUpdate eml-party test example with ORCID.editsrc/test/resources/eml-party.xmlsrc/test/resources/eml-data-paper.xmlxsd/eml-dataset.xsda4572f0605b350dc51cee1369ff66e03e8b6b3521518207685000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgInitial pass at introduction, acknowledgements, and gettingStarted sections. All sections are of type TextType, which still needs to be modified to support Markdown syntax. 2018-02-09 11:21:25 -0900a4572f0605b350dc51cee1369ff66e03e8b6b352Initial pass at introduction, acknowledgements, and gettingStartedaddsrc/test/resources/eml-data-paper.xmleditxsd/eml-dataset.xsdlib/eml.jard49a7a72c5c622e4cef360184cfab117562077681518207790000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRebuilt eml.jar for 2.2.0 support. 2018-02-09 11:23:10 -0900d49a7a72c5c622e4cef360184cfab11756207768Rebuilt eml.jar for 2.2.0 support.editlib/eml.jarxsd/eml-text.xsdsrc/test/resources/eml-data-paper.xml54c7cd797dd3310630c197160e2882a4526c1be11518231207000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgDrafted new fields for data paper support. This includes a new `markdown` element in `txt:TextType` to support Github flavored markdown. And new elements for an introduction, gettingStarted, and acknowledgements. See issue #269 and #275. 2018-02-09 17:53:27 -090054c7cd797dd3310630c197160e2882a4526c1be1Drafted new fields for data paper support.editsrc/test/resources/eml-data-paper.xmleditxsd/eml-text.xsdlib/sample/eml-sample.xmlef747dff61f39f1f122e321ae9572fac47f54f731518468665000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgMake the `award` element valid in the sample EML document. 2018-02-12 11:51:05 -0900ef747dff61f39f1f122e321ae9572fac47f54f73Make the `award` element valid in the sample EML document.editlib/sample/eml-sample.xmleml-documentation.xsl781d24eaa7dc8d2a5b3189a0bd4b46d1a0de5b3e1518468706000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd the semantics module to the doc generator. 2018-02-12 11:51:46 -0900781d24eaa7dc8d2a5b3189a0bd4b46d1a0de5b3eAdd the semantics module to the doc generator.editeml-documentation.xslsrc/test/resources/eml-data-paper.xml2f72c4f51e09610a6e416f56b8959095b8dc40c31518468831000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd link to GFM in example markdown. 2018-02-12 11:53:51 -09002f72c4f51e09610a6e416f56b8959095b8dc40c3Add link to GFM in example markdown.editsrc/test/resources/eml-data-paper.xmlxsd/eml-text.xsdc70fcf0061e5eef7b9fb8bba21df17bda5bb0c131518468883000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgImprove markdown documentation. Include desciptions of indenting, CDATA, and how image links are handled relative to EML. 2018-02-12 11:54:43 -0900c70fcf0061e5eef7b9fb8bba21df17bda5bb0c13Improve markdown documentation.editxsd/eml-text.xsd.travis.ymla401c6cf6a5bae1fa0fadfe7227ae09dd5f0c9831518469150000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgCheck if the ant tests work in Travis. 2018-02-12 11:59:10 -0900a401c6cf6a5bae1fa0fadfe7227ae09dd5f0c983Check if the ant tests work in Travis.edit.travis.ymlsrc/test/resources/eml-data-paper.xmlc37b67b35e2d55edf4d7f55a43a4ed1a9f7beb6a1519255844000http://jenkins-ucsb-1.dataone.org/jenkins/user/mobmobmob@mcr-office02.msi.ucsb.eduadded an abstract containing a sample equation eml-data-paper.xml 2018-02-21 15:30:44 -0800c37b67b35e2d55edf4d7f55a43a4ed1a9f7beb6aadded an abstract containing a sample equation eml-data-paper.xmleditsrc/test/resources/eml-data-paper.xmlxsd/eml-project.xsdde214f33c90dff86b750f8c99f83b02a61647c021519437879000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgchanged replaced -> augmented 2018-02-23 17:04:39 -0900de214f33c90dff86b750f8c99f83b02a61647c02changed replaced -> augmentededitxsd/eml-project.xsdxsd/eml-semantics.xsdxsd/eml-entity.xsdxsd/eml-resource.xsdxsd/eml-attribute.xsd733a650e43d4d31ca6ed04d71e1326687209a79b1519438921000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgChanged `propertyURI` and label to optional. Added documentation to indicate that, when propertyURI is not provided, then the property defaults to dc:subject for resources and entities, and to oboe:MeasurementType for attributes. 2018-02-23 17:22:01 -0900733a650e43d4d31ca6ed04d71e1326687209a79bChanged `propertyURI` and label to optional.editxsd/eml-resource.xsdeditxsd/eml-semantics.xsdeditxsd/eml-entity.xsdeditxsd/eml-attribute.xsdsrc/test/resources/eml-data-paper.xmlxsd/eml-resource.xsd5b5d47f2e1f02b55e8d05718c26f56fc3a973e9b1519451327000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd machine-readable license element. 2018-02-23 20:48:47 -09005b5d47f2e1f02b55e8d05718c26f56fc3a973e9bAdd machine-readable license element.editsrc/test/resources/eml-data-paper.xmleditxsd/eml-resource.xsdxsd/eml-resource.xsdsrc/test/resources/eml-data-paper.xml491b715961cf7ffe931fce3237bfc6ccdff586871519453671000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRename license element to avoid conflict. 2018-02-23 21:27:51 -0900491b715961cf7ffe931fce3237bfc6ccdff58687Rename license element to avoid conflict.editxsd/eml-resource.xsdeditsrc/test/resources/eml-data-paper.xmlxsd/eml-text.xsdd7195e85fa724c0f890fa5fd9a84b992ac306e341521486915000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix typos in docs. 2018-03-19 11:15:15 -0800d7195e85fa724c0f890fa5fd9a84b992ac306e34Fix typos in docs.editxsd/eml-text.xsdxsd/stmml.xsdeml-unitDictionary.xml0ef141f327369d73f487fa269441209d946c2dc01522347712000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edu1) stmml.xsd with two new attributes for a unit: deprecatedInFavorOf and udunitsSynomym. 2) Version 1 of an eml-unitDictionary.xml that uses the new unit attribues. 2018-03-29 11:21:52 -07000ef141f327369d73f487fa269441209d946c2dc01) stmml.xsd with two new attributes for a unit: deprecatedInFavorOf andeditxsd/stmml.xsdediteml-unitDictionary.xmleml-unitDictionary.xmld3a8990074b24ee94d2ee688db9172165271b4e11522882540000http://jenkins-ucsb-1.dataone.org/jenkins/user/mmaiermmaiermmaier@ucsb.eduRevert to eml-unitDictionary.xml to 82dd0dd4178e27097f15813bb2c4d15f526e814b 2018-04-04 15:55:40 -0700d3a8990074b24ee94d2ee688db9172165271b4e1Revert to eml-unitDictionary.xml toediteml-unitDictionary.xmleml-unitDictionary.xml526c28560e83e6d1f93752cd830eaccef947974a1522882646000http://jenkins-ucsb-1.dataone.org/jenkins/user/mmaiermmaiermmaier@ucsb.eduadd deprecatedInFavorOf information 2018-04-04 15:57:26 -0700526c28560e83e6d1f93752cd830eaccef947974aadd deprecatedInFavorOf informationediteml-unitDictionary.xmlsrc/test/resources/eml-data-paper.xml7d0ae428b15aafe05c2a8ecbaeda5fefce8fb5dc1524624432000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFurther fleshed out sections in example data paper. 2018-04-24 18:47:12 -08007d0ae428b15aafe05c2a8ecbaeda5fefce8fb5dcFurther fleshed out sections in example data paper.editsrc/test/resources/eml-data-paper.xmlxsd/eml-text.xsdxsd/eml-dataset.xsdsrc/test/resources/eml-data-paper.xmlxsd/eml-literature.xsd3beb10b2850fccf66789253041563d53a4ccbecf1524638772000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded support for new citation formats, fields, and inline citations. These include a new ability to use Bibtex citation format both within the `citation` element, and within a new `bibtex` element, to create lists of refs using these in a literatureCited element (#300), as well as in usageCitation (#259), and referencePublication (#277) elements. All of this helps support data papers (#269), for which pandoc-style citation keys can be used to cite these references in the text of Markdown blocks in the EML document. Added these features as demonstrations in the eml-data-paper.xml sample document. 2018-04-24 22:46:12 -08003beb10b2850fccf66789253041563d53a4ccbecfAdded support for new citation formats, fields, and inline citations.editxsd/eml-literature.xsdeditsrc/test/resources/eml-data-paper.xmleditxsd/eml-dataset.xsdeditxsd/eml-text.xsdsrc/test/resources/eml-data-paper.xml1e07fe90a6d9755acfdbfa85606cfe5ec4cf689d1524639788000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix validation error on schema location for data paper sample doc. 2018-04-24 23:03:08 -08001e07fe90a6d9755acfdbfa85606cfe5ec4cf689dFix validation error on schema location for data paper sample doc.editsrc/test/resources/eml-data-paper.xmlsrc/test/resources/eml-data-paper.xmlbuild.xml793afde6d93b64473afef65bff480ba471aad9f41524640628000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgCheck that Travis build fails when tests fail or error. 2018-04-24 23:17:08 -0800793afde6d93b64473afef65bff480ba471aad9f4Check that Travis build fails when tests fail or error.editsrc/test/resources/eml-data-paper.xmleditbuild.xmlsrc/test/resources/eml-data-paper.xmlaf2726554432c93fcf6fb90b5f402b6a4896004b1524640837000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix data paper sample so that it validates. 2018-04-24 23:20:37 -0800af2726554432c93fcf6fb90b5f402b6a4896004bFix data paper sample so that it validates.editsrc/test/resources/eml-data-paper.xmleml-unitDictionary.xmldcd2784182f97b8191239ed5a203171e81baa7f81526418457000http://jenkins-ucsb-1.dataone.org/jenkins/user/mmaiermmaiermmaier@ucsb.eduAdd new units 2018-05-15 14:07:37 -0700dcd2784182f97b8191239ed5a203171e81baa7f8Add new unitsediteml-unitDictionary.xmleml-unitDictionary.xml864e59e0e0b3854da02ffa4851b00b97ade9881f1526429400000http://jenkins-ucsb-1.dataone.org/jenkins/user/mmaiermmaiermmaier@ucsb.eduudunitSynonym for all units 2018-05-15 17:10:00 -0700864e59e0e0b3854da02ffa4851b00b97ade9881fudunitSynonym for all unitsediteml-unitDictionary.xmlsrc/test/resources/eml-2.1.1-all-units.xml05bf32bc20e375bf951e876db20d8347a20e08701529978008000http://jenkins-ucsb-1.dataone.org/jenkins/user/mmaiermmaiermmaier@ucsb.eduTest file with all 2.1.1 units 2018-06-25 18:53:28 -070005bf32bc20e375bf951e876db20d8347a20e0870Test file with all 2.1.1 unitsaddsrc/test/resources/eml-2.1.1-all-units.xmlsrc/test/resources/eml-2.1.1-all-units.xmled0d5dacc8f89784e66b6ab907987f89bb7ab05f1530037280000http://jenkins-ucsb-1.dataone.org/jenkins/user/mmaiermmaiermmaier@ucsb.eduSchema location change 2018-06-26 11:21:20 -0700ed0d5dacc8f89784e66b6ab907987f89bb7ab05fSchema location changeeditsrc/test/resources/eml-2.1.1-all-units.xmleml-unitDictionary.xml77fc07f42a8e57625affaeaff04db83008ba2d2c1530038647000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduset the namespace for stmml-1.2 in the root element. added a missing multiplierToParentSI 2018-06-26 11:44:07 -070077fc07f42a8e57625affaeaff04db83008ba2d2cset the namespace for stmml-1.2 in the root element. added a missingediteml-unitDictionary.xmlsrc/test/resources/eml-2.1.1-all-units.xml0a22907f1b3cca80d5b3b7b95ff697c2095d7b2c1530041219000http://jenkins-ucsb-1.dataone.org/jenkins/user/mmaiermmaiermmaier@ucsb.edufixes to all-units test 2018-06-26 12:26:59 -07000a22907f1b3cca80d5b3b7b95ff697c2095d7b2cfixes to all-units testeditsrc/test/resources/eml-2.1.1-all-units.xmlxsd/eml-literature.xsd595f1dc062e62d0b15aadda4d120ea899eac96a71530242626000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgEnsure CitationListType has at least one citation. 2018-06-28 19:23:46 -0800595f1dc062e62d0b15aadda4d120ea899eac96a7Ensure CitationListType has at least one citation.editxsd/eml-literature.xsdsrc/test/resources/eml-software-220.xmlxsd/eml-software.xsd07b449808b7ed5b7eb9aed7f56a0eea23e8f13d51530248418000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgChanged `dependency` to use a ComplexType. Removed use of `ref` to a global element. Details in issue #305. 2018-06-28 21:00:18 -080007b449808b7ed5b7eb9aed7f56a0eea23e8f13d5Changed `dependency` to use a ComplexType.addsrc/test/resources/eml-software-220.xmleditxsd/eml-software.xsdsrc/test/resources/eml-software-dependency.xmlsrc/test/resources/eml-software-220.xmld53167203e50088ae3226335aba85df32ffb82381530248657000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRename test file. 2018-06-28 21:04:17 -0800d53167203e50088ae3226335aba85df32ffb8238Rename test file.deletesrc/test/resources/eml-software-220.xmladdsrc/test/resources/eml-software-dependency.xmlxsd/eml-semantics.xsdxsd/eml-entity.xsdxsd/eml-resource.xsdxsd/eml-attribute.xsdsrc/test/resources/eml-semantics.xmlsrc/test/resources/eml-sample.xmlxsd/eml.xsdsrc/test/resources/eml-data-paper.xml3a751d007d29f514f7f93b89f954c9c3e29472001530259381000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgCompleted fields for semantic annotation. See discssion in issue #25. 2018-06-29 00:03:01 -08003a751d007d29f514f7f93b89f954c9c3e2947200Completed fields for semantic annotation.editxsd/eml-resource.xsdeditxsd/eml-semantics.xsdeditsrc/test/resources/eml-data-paper.xmleditsrc/test/resources/eml-sample.xmleditxsd/eml.xsdeditxsd/eml-entity.xsdeditxsd/eml-attribute.xsdeditsrc/test/resources/eml-semantics.xmlsrc/test/resources/citation-sbclter-bibliography.285.xmlsrc/test/resources/citation-sbclter-bibliography.279.xmlsrc/test/resources/citation-sbclter-bibliography.231.xmlsrc/test/resources/citation-sbclter-bibliography.201.xmlsrc/test/resources/citation-sbclter-bibliography.296.xmlsrc/test/resources/citation-sbclter-bibliography.203.xmlsrc/test/resources/citation-sbclter-bibliography.51.xmlsrc/test/resources/citation-sbclter-bibliography.233.xmlsrc/test/resources/citation-sbclter-bibliography.211.xmlsrc/test/resources/citation-sbclter-bibliography.289.xmlsrc/test/resources/citation-sbclter-bibliography.297.xmlsrc/test/resources/citation-sbclter-bibliography.280.xmlsrc/test/resources/citation-sbclter-bibliography.232.xmlsrc/test/resources/citation-sbclter-bibliography.50.xmlsrc/test/resources/citation-sbclter-bibliography.284.xmlsrc/test/resources/citation-sbclter-bibliography.202.xmlc494365efd777f6a3f6021b72f3eda114307ea691530261703000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate namespace of etst cittion docs. Work towards #304. 2018-06-29 00:41:43 -0800c494365efd777f6a3f6021b72f3eda114307ea69Update namespace of etst cittion docs.editsrc/test/resources/citation-sbclter-bibliography.211.xmleditsrc/test/resources/citation-sbclter-bibliography.202.xmleditsrc/test/resources/citation-sbclter-bibliography.232.xmleditsrc/test/resources/citation-sbclter-bibliography.284.xmleditsrc/test/resources/citation-sbclter-bibliography.201.xmleditsrc/test/resources/citation-sbclter-bibliography.279.xmleditsrc/test/resources/citation-sbclter-bibliography.296.xmleditsrc/test/resources/citation-sbclter-bibliography.233.xmleditsrc/test/resources/citation-sbclter-bibliography.285.xmleditsrc/test/resources/citation-sbclter-bibliography.203.xmleditsrc/test/resources/citation-sbclter-bibliography.50.xmleditsrc/test/resources/citation-sbclter-bibliography.289.xmleditsrc/test/resources/citation-sbclter-bibliography.51.xmleditsrc/test/resources/citation-sbclter-bibliography.231.xmleditsrc/test/resources/citation-sbclter-bibliography.280.xmleditsrc/test/resources/citation-sbclter-bibliography.297.xmleml-unitDictionary.xml394bb9432cba46cc54497e101d9db054d76ea2051530648597000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduadded units for issues #140, #115. renamed unitTypes for issues #285, #285 2018-07-03 13:09:57 -0700394bb9432cba46cc54497e101d9db054d76ea205added units for issues #140, #115. renamed unitTypes for issues #285,editeml-unitDictionary.xmleml-unitDictionary.xmlb18bb244ced0022a890b311911bd74396aea9c1a1530651277000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduparentSI units are all in preferred spelling 2018-07-03 13:54:37 -0700b18bb244ced0022a890b311911bd74396aea9c1aparentSI units are all in preferred spellingediteml-unitDictionary.xmlxsd/eml-coverage.xsdd2a63db10662b8e30618199db60f6dcc55033aee1531250818000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduAdded to taxonomicClassificationType: an id on the taxonomicClassification; new child element with attribute "provider". Added basic documentation 2018-07-10 12:26:58 -0700d2a63db10662b8e30618199db60f6dcc55033aeeAdded to taxonomicClassificationType: an id on theeditxsd/eml-coverage.xsdxsd/eml-coverage.xsd7bab17ba92658b30b20381225204ba226d2c1b911531325630000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduset taxonId@provider to anyURI. shortened examples and documentation 2018-07-11 09:13:50 -07007bab17ba92658b30b20381225204ba226d2c1b91set taxonId@provider to anyURI. shortened examples and documentationeditxsd/eml-coverage.xsdeml-unitDictionary.xmlb65bc48801ea9cd87c3cdcd7cd6a6548a952cff01531520704000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduadded units from issues #140, #151, corrected a few copy-paste errors. Updated many definitions (based on wikipedia info) 2018-07-13 15:25:04 -0700b65bc48801ea9cd87c3cdcd7cd6a6548a952cff0added units from issues #140, #151, corrected a few copy-paste errors.editeml-unitDictionary.xmlxsd/eml-unitTypeDefinitions.xsd9cc4595e186eebe54f21cfd9a1b3fdcfd3243bd91531524366000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduunitTypeDefintions file updated with unit names from unitDictionary.xml 2018-07-13 16:26:06 -07009cc4595e186eebe54f21cfd9a1b3fdcfd3243bd9unitTypeDefintions file updated with unit names from unitDictionary.xmleditxsd/eml-unitTypeDefinitions.xsdsrc/test/resources/eml-i18n.xml3dd83f8dab05bfbea8388e85264a1791bf5e76801531526108000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduadded example with new taxonId element, per issue #141 2018-07-13 16:55:08 -07003dd83f8dab05bfbea8388e85264a1791bf5e7680added example with new taxonId element, per issue #141editsrc/test/resources/eml-i18n.xmlxsd/eml-coverage.xsd89855dda41130afc6b80b43e74413fd10ddc0ef61534447230000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edutaxonCov documentation fixed for species binomials, issue #250 2018-08-16 12:20:30 -070089855dda41130afc6b80b43e74413fd10ddc0ef6taxonCov documentation fixed for species binomials, issue #250editxsd/eml-coverage.xsdxsd/eml-attribute.xsd2b524be958604e35f174708547e47e82c4dc37511534451097000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edudateTime docs, per issue #268: updated examples, added notes on ISO rules 2018-08-16 13:24:57 -07002b524be958604e35f174708547e47e82c4dc3751dateTime docs, per issue #268: updated examples, added notes on ISOeditxsd/eml-attribute.xsdxsd/eml-coverage.xsd01db92026f6b153ea8d85da8093286d8d6129a2c1534524549000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edudocumentation: added note about species binomials. added examples to taxonId 2018-08-17 09:49:09 -070001db92026f6b153ea8d85da8093286d8d6129a2cdocumentation: added note about species binomials. added examples toeditxsd/eml-coverage.xsd.gitignore0d8ff0952cf98f07cfc973a0335612d07a00f7451534642862000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgIgnore .DS_Store files. 2018-08-18 18:41:02 -07000d8ff0952cf98f07cfc973a0335612d07a00f745Ignore .DS_Store files.edit.gitignorebuildDependencyTable.xsl49736569989c550bb9daf1cf31253042ca394e331534646661000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgReformat buildDependency.xsl for readability and indentation. 2018-08-18 19:44:21 -070049736569989c550bb9daf1cf31253042ca394e33Reformat buildDependency.xsl for readability and indentation.editbuildDependencyTable.xslbuildDependencyTable.xslc76944be288a142b2ee08360626fed170ac975881534646735000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix dependency tree generation using new file locations. Previously, the xsl file did not manage the change to using the xsd directory location. Now it does. 2018-08-18 19:45:35 -0700c76944be288a142b2ee08360626fed170ac97588Fix dependency tree generation using new file locations.editbuildDependencyTable.xslbuild.xmldocs/eml-210info.mddocs/index.mddocs/eml-211info.mddocs/eml-faq.md5c4635c14dae8db20ef9c571125d39bf09e269551534721637000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgExperiment with moving EML documentation into markdown files in docs. 2018-08-19 16:33:57 -07005c4635c14dae8db20ef9c571125d39bf09e26955Experiment with moving EML documentation into markdown files in docs.adddocs/eml-210info.mdeditbuild.xmladddocs/index.mdadddocs/eml-211info.mdadddocs/eml-faq.mdindex.mdindex.htmldocs/index.mdaf13811b0fec38fc7381ad48f98422feb8ee98601534721949000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgTest using markdown for documentation. 2018-08-19 16:39:09 -0700af13811b0fec38fc7381ad48f98422feb8ee9860Test using markdown for documentation.addindex.mddeleteindex.htmldeletedocs/index.md_config.yml199790442aa9073f8296254df5a44ab7962a6dfd1534722308000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgSet theme jekyll-theme-slate 2018-08-19 16:45:08 -0700199790442aa9073f8296254df5a44ab7962a6dfdSet theme jekyll-theme-slateadd_config.ymleml-211info.xmleml-210info.xmleml-faq.xml504460c5227d041305fe0e1f0bd581141ade09de1534898605000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRemove docbook ancillary docs files, which are now in markdown format. 2018-08-21 17:43:25 -0700504460c5227d041305fe0e1f0bd581141ade09deRemove docbook ancillary docs files, which are now in markdown format.deleteeml-210info.xmldeleteeml-211info.xmldeleteeml-faq.xmlmembers.mdeml-dublinCore.htmldocs/members.mdindex.mddocs/index.mddocs/eml-dublinCore.htmlREADME.md7b937da111a7879e0615eab0f0da1bbbbe87be3f1534900503000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgMove documentation into docs directory. 2018-08-21 18:15:03 -07007b937da111a7879e0615eab0f0da1bbbbe87be3fMove documentation into docs directory.adddocs/index.mddeleteindex.mddeleteeml-dublinCore.htmladddocs/eml-dublinCore.htmleditREADME.mddeletemembers.mdadddocs/members.mdbuildDocBook.xsl245d5f3da16009e69332402d50c55f26deaa1f351534902598000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate rules language and formatting. 2018-08-21 18:49:58 -0700245d5f3da16009e69332402d50c55f26deaa1f35Update rules language and formatting.editbuildDocBook.xsleml-documentation.xsl2d0ebdcdbcf15dc47aaa27e0d6dea83d5ca2b23d1535405696000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix location of CSS file in new directory layout. 2018-08-27 14:34:56 -07002d0ebdcdbcf15dc47aaa27e0d6dea83d5ca2b23dFix location of CSS file in new directory layout.editeml-documentation.xsldocs/references-xslt.mdreferences_XSLT.txt61812a495949ff5d003e40a47f0c7986af881e6d1535405995000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgMoved references handling instructions to markdown format in docs. 2018-08-27 14:39:55 -070061812a495949ff5d003e40a47f0c7986af881e6dMoved references handling instructions to markdown format in docs.adddocs/references-xslt.mddeletereferences_XSLT.txt.gitignore0e540f7e0ec3430277f9a6aaf785f568f58dacca1535406088000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgIgnore jekyll _site directory. 2018-08-27 14:41:28 -07000e540f7e0ec3430277f9a6aaf785f568f58daccaIgnore jekyll _site directory.edit.gitignoredocs/eml-220info.md9fda978eee836ab2203e7000dd22a5c74d57b5a71539913128000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgadd EML 2.2 changes document See issue #308 2018-10-18 17:38:48 -08009fda978eee836ab2203e7000dd22a5c74d57b5a7add EML 2.2 changes documentadddocs/eml-220info.mddocs/eml-220info.mdc2b1d2f45ee5072204253380bb0f26a3193cf5ed1539913128000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRevise what's new after comparing against mob's ASM slides 2018-10-18 17:38:48 -0800c2b1d2f45ee5072204253380bb0f26a3193cf5edRevise what's new after comparing against mob's ASM slideseditdocs/eml-220info.mdREADME.mdc5f9cc738f87b6264865a0e2bc9e10b657bcdb4c1539920961000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRestructured README to present citation format. Also added new contributors, restructured the document order, and rewrote the abstract. 2018-10-18 19:49:21 -0800c5f9cc738f87b6264865a0e2bc9e10b657bcdb4cRestructured README to present citation format.editREADME.mdREADME.md048285a7923766fe9ee55868ada7744db4b318ec1539960224000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded Mitchell. 2018-10-19 07:43:44 -0700048285a7923766fe9ee55868ada7744db4b318ecAdded Mitchell.editREADME.mdstyle/eml211to220.xslf5819655746555da4f2d41bda122dea729b236e21540851538000http://jenkins-ucsb-1.dataone.org/jenkins/user/mobmobmob@msi.ucsb.eduupdated namespace at top level. noticed that some test files have stmml namespace in additional metadata also. to do 2018-10-29 15:18:58 -0700f5819655746555da4f2d41bda122dea729b236e2updated namespace at top level. noticed that some test files have stmmladdstyle/eml211to220.xslstyle/eml211to220.xsl0ff9afe996248c9beeec26d2f54c723ec36407ac1540852880000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edustmml namespace updated in additionalMetadata also 2018-10-29 15:41:20 -07000ff9afe996248c9beeec26d2f54c723ec36407acstmml namespace updated in additionalMetadata alsoeditstyle/eml211to220.xslstyle/eml_appinfo2documentation.xslcfe1b405474fa45c749c5be6423cb0cd9d218ead1540943828000http://jenkins-ucsb-1.dataone.org/jenkins/user/mobmobmob@msi.ucsb.eduadding a template to move appinfo to documentation 2018-10-30 16:57:08 -0700cfe1b405474fa45c749c5be6423cb0cd9d218eadadding a template to move appinfo to documentationaddstyle/eml_appinfo2documentation.xsldocs/eml-220info.md74f29b536e7a79e92833fec55e4156bb7d86abb61542505247000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgdisambiguate literatureCited example Fixes #318 2018-11-17 17:40:47 -080074f29b536e7a79e92833fec55e4156bb7d86abb6disambiguate literatureCited exampleeditdocs/eml-220info.mdREADME.md77050db71954849169cdb205f3712c3501e699231542825805000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgQUote elements to avoid build problems in html output. 2018-11-21 10:43:25 -080077050db71954849169cdb205f3712c3501e69923QUote elements to avoid build problems in html output.editREADME.mdREADME.mdb284202b6f61866f6cc0bfdc98711522de6af5a41542826064000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix link to FLED to point at archive.org copy. 2018-11-21 10:47:44 -0800b284202b6f61866f6cc0bfdc98711522de6af5a4Fix link to FLED to point at archive.org copy.editREADME.mddocs/members.mddocs/index.Rmd.gitignoredocs/eml-220info.mddocs/book.bibdocs/emldocs.Rprojdocs/release-notes.mddocs/_output.ymldocs/contributors.mddocs/index.mdREADME.md782c8ad72a17a6b74d20144eb8e11d6164a27e731542846475000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgInitial structure for a Bookdown version of the EML spec. More work to be done to convert the old docbook structure to markdown. See issue #321. 2018-11-21 16:27:55 -0800782c8ad72a17a6b74d20144eb8e11d6164a27e73Initial structure for a Bookdown version of the EML spec.adddocs/index.Rmdadddocs/_output.ymleditdocs/eml-220info.mddeletedocs/index.mdadddocs/book.bibadddocs/emldocs.Rprojedit.gitignoreeditREADME.mdadddocs/release-notes.mddeletedocs/members.mdadddocs/contributors.mddocs/_bookdown.ymldocs/index.Rmddocs/about-this-book.mddocs/references.mdef1f73d7b792cc4a18acaaf773b20fe4bd0f15d51542848788000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded bookdown configuration for citations. 2018-11-21 17:06:28 -0800ef1f73d7b792cc4a18acaaf773b20fe4bd0f15d5Added bookdown configuration for citations.adddocs/_bookdown.ymleditdocs/index.Rmdadddocs/about-this-book.mdadddocs/references.mddocs/_bookdown.ymldocs/ch2-spec-overview.mddocs/ch1-spec-preface.mddocs/ch3-spec-architecture.mdce9653468316034afe3dd58226d4943ce33cc31e1542907371000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgInitial conversion of spec to markdown. Lots of reorganization remaining. 2018-11-22 09:22:51 -0800ce9653468316034afe3dd58226d4943ce33cc31eInitial conversion of spec to markdown.adddocs/ch3-spec-architecture.mdadddocs/ch2-spec-overview.mdadddocs/ch1-spec-preface.mdeditdocs/_bookdown.ymlREADME.md15cad4cb601d3df9472049238149ff6c9893fdc81542908742000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix typo in abstract. 2018-11-22 09:45:42 -080015cad4cb601d3df9472049238149ff6c9893fdc8Fix typo in abstract.editREADME.mddocs/ch3-spec-architecture.md576c69b098d2d18a985dec581d0fdc40273026f61542908758000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgReformat list. 2018-11-22 09:45:58 -0800576c69b098d2d18a985dec581d0fdc40273026f6Reformat list.editdocs/ch3-spec-architecture.mddocs/ch2-spec-overview.mdf5ef47f7b00578bfad2218cbd4216884ae0920141542909715000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd semantics module overview section. Stubbed from the schema. Needs extension. 2018-11-22 10:01:55 -0800f5ef47f7b00578bfad2218cbd4216884ae092014Add semantics module overview section.editdocs/ch2-spec-overview.mdxsd/eml-text.xsdxsd/eml-entity.xsdxsd/eml-dataset.xsdxsd/eml-unitTypeDefinitions.xsdxsd/eml-spatialVector.xsdxsd/eml-spatialReference.xsdxsd/eml-software.xsdxsd/eml-dataTable.xsdxsd/eml-literature.xsdxsd/eml-physical.xsdxsd/eml-protocol.xsdxsd/eml-storedProcedure.xsdxsd/eml-access.xsdxsd/eml-semantics.xsdxsd/eml-attribute.xsdxsd/eml-resource.xsdxsd/eml-coverage.xsdxsd/eml-project.xsdxsd/eml-spatialRaster.xsdxsd/eml-party.xsdxsd/eml-methods.xsdxsd/eml-view.xsdxsd/eml-constraint.xsd4ca6efd8446899206b973e2c1c8bcf1dcd3ae8401542909778000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRemoved module description text from schemas. This text is now in the specification document in "docs". 2018-11-22 10:02:58 -08004ca6efd8446899206b973e2c1c8bcf1dcd3ae840Removed module description text from schemas.editxsd/eml-physical.xsdeditxsd/eml-protocol.xsdeditxsd/eml-project.xsdeditxsd/eml-dataset.xsdeditxsd/eml-software.xsdeditxsd/eml-constraint.xsdeditxsd/eml-spatialVector.xsdeditxsd/eml-attribute.xsdeditxsd/eml-text.xsdeditxsd/eml-storedProcedure.xsdeditxsd/eml-dataTable.xsdeditxsd/eml-view.xsdeditxsd/eml-spatialRaster.xsdeditxsd/eml-unitTypeDefinitions.xsdeditxsd/eml-methods.xsdeditxsd/eml-semantics.xsdeditxsd/eml-coverage.xsdeditxsd/eml-entity.xsdeditxsd/eml-spatialReference.xsdeditxsd/eml-party.xsdeditxsd/eml-literature.xsdeditxsd/eml-access.xsdeditxsd/eml-resource.xsdbuildDocBook.xsl48b330a91657e3b8e0c6f3d3eab0ded986333a481542910448000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRemoved specification text from xsl. This text is now in the docs directory in markdown. 2018-11-22 10:14:08 -080048b330a91657e3b8e0c6f3d3eab0ded986333a48Removed specification text from xsl.editbuildDocBook.xslbuild.xmlec604a4c5eafdecf5e37402c04cb13b47ffbf7e31542910490000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRemove unneeded build stages now that docs are in markdown. 2018-11-22 10:14:50 -0800ec604a4c5eafdecf5e37402c04cb13b47ffbf7e3Remove unneeded build stages now that docs are in 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docbook from the build and tests. 2018-11-22 10:33:17 -080094d25b3d0120fd1ed6332e1359f07acb1e71f1edRemove docbook from the build and 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accidentally committed config file. 2018-11-22 10:38:13 -08005cc1ecb3ab08a962e947f8266a98791ab8378c45Remove accidentally committed config file.deleteeml.xprdocs/eml-literature.md66e7e33d50463fb86bb741ebb996ca0fc2a272e71543202424000http://jenkins-ucsb-1.dataone.org/jenkins/user/stevan.earlstevan.earlstevan.earl@asu.eduadding eml-literature file to document new citation types 2018-11-25 20:20:24 -070066e7e33d50463fb86bb741ebb996ca0fc2a272e7adding eml-literature file to document new citation typesadddocs/eml-literature.mdxsd/eml.xsdc2f7f0ec6882cce343d52b6ffefc1025d1d2d4e71543262992000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgClarified documentation on the packaeId attribute. 2018-11-26 12:09:52 -0800c2f7f0ec6882cce343d52b6ffefc1025d1d2d4e7Clarified documentation on the packaeId attribute.editxsd/eml.xsdxsd/eml-resource.xsdea2acf7eb62e57528be231dc15d0685ffc595e481543267694000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRemove erroneous default value for system attributes. Older eml documents may have set this explicitly, but the lack of sa default should not cause any compatibility issues. 2018-11-26 13:28:14 -0800ea2acf7eb62e57528be231dc15d0685ffc595e48Remove erroneous default value for system attributes.editxsd/eml-resource.xsddocs/ch3-spec-architecture.md7360165e7e9327e6c3a03e9c7e168f5de3def28b1543270171000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRewrote validation section to be much clearer. Also provided a pseudo-code example of validation logic, as requested in issue #306. 2018-11-26 14:09:31 -08007360165e7e9327e6c3a03e9c7e168f5de3def28bRewrote validation section to be much clearer.editdocs/ch3-spec-architecture.mddocs/_bookdown.ymldocs/ch2-spec-overview.mddocs/ch1-spec-preface.mddocs/eml-220info.mddocs/eml-features.mdbe0bf2df784f2e6b27b19fbf754b2cf21a0f94f11543270387000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRewrote validity and features sections, and renamed files. Also updated section headings to be clearer. 2018-11-26 14:13:07 -0800be0bf2df784f2e6b27b19fbf754b2cf21a0f94f1Rewrote validity and features sections, and renamed files.adddocs/eml-features.mddeletedocs/ch1-spec-preface.mdeditdocs/_bookdown.ymleditdocs/eml-220info.mdeditdocs/ch2-spec-overview.mdsrc/test/resources/eml-sample.xml35cec8af81bfba7a49792273debbef41143d5e411543270421000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgChanged exmaples to use doi identifiers for clarity. 2018-11-26 14:13:41 -080035cec8af81bfba7a49792273debbef41143d5e41Changed exmaples to use doi identifiers for clarity.editsrc/test/resources/eml-sample.xmldocs/_bookdown.ymldocs/ch3-spec-architecture.mddocs/eml-validation-refs.mdb164dde8e09d4680e814cf33ce363aa61b52e98d1543270532000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRename validation chapter. 2018-11-26 14:15:32 -0800b164dde8e09d4680e814cf33ce363aa61b52e98dRename validation chapter.editdocs/_bookdown.ymladddocs/eml-validation-refs.mddeletedocs/ch3-spec-architecture.mddocs/_bookdown.ymldocs/eml-contributors.mddocs/ch2-spec-overview.mddocs/eml-about-this-book.mddocs/eml-modules.mddocs/release-notes.mddocs/references.mddocs/eml-release-notes.mddocs/about-this-book.mddocs/contributors.mddocs/eml-references.md77f60e46a9ff1f761549ab6e0b936bfa823a43871543271049000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRename chapters more consistently. 2018-11-26 14:24:09 -080077f60e46a9ff1f761549ab6e0b936bfa823a4387Rename chapters more consistently.adddocs/eml-references.mdeditdocs/_bookdown.ymladddocs/eml-contributors.mddeletedocs/ch2-spec-overview.mdadddocs/eml-about-this-book.mddeletedocs/contributors.mdadddocs/eml-release-notes.mdadddocs/eml-modules.mddeletedocs/about-this-book.mddeletedocs/release-notes.mddeletedocs/references.mddocs/_output.ymldcd1ecf3f2cc09d82844f7dac5896ff7cbcf4c091543271259000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate TOC links. 2018-11-26 14:27:39 -0800dcd1ecf3f2cc09d82844f7dac5896ff7cbcf4c09Update TOC links.editdocs/_output.ymldocs/eml-modules.mddocs/eml-literature.md7bca396cf32d1dbe62a9853ed97eaff1b69ea8561543272314000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgIncorporate eml-literature module into the eml-module.md. 2018-11-26 14:45:14 -08007bca396cf32d1dbe62a9853ed97eaff1b69ea856Incorporate eml-literature module into the eml-module.md.deletedocs/eml-literature.mdeditdocs/eml-modules.mddocs/_bookdown.ymldocs/eml-modules-data-structure.mddocs/eml-modules-utility.mddocs/eml-modules-discovery-interpret.mddocs/eml-modules.mddocs/eml-internationalization.mddocs/eml-modules-resources.md3b4a70d0128bdedd71c5a13804b1fd0af666c97a1543274338000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgReorganize modules section into 4 chapters plus ancillary material. 2018-11-26 15:18:58 -08003b4a70d0128bdedd71c5a13804b1fd0af666c97aReorganize modules section into 4 chapters plus ancillary material.adddocs/eml-modules-utility.mdadddocs/eml-modules-resources.mddeletedocs/eml-modules.mdadddocs/eml-modules-discovery-interpret.mdeditdocs/_bookdown.ymladddocs/eml-internationalization.mdadddocs/eml-modules-data-structure.mdREADME.md0b372148dc952c3c4c3b4eb8dd1f24a5cf1fb70c1543282260000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd Getting Started section. 2018-11-26 17:31:00 -08000b372148dc952c3c4c3b4eb8dd1f24a5cf1fb70cAdd Getting Started section.editREADME.mddocs/eml-validation-refs.md9adbcd083735235fb09b30fa4ee3929a8ac12f291543398903000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comreplace referencesList with referencesHash 2018-11-28 10:55:03 +01009adbcd083735235fb09b30fa4ee3929a8ac12f29replace referencesList with referencesHasheditdocs/eml-validation-refs.mddocs/eml-contributors.mdREADME.mdb661eea5f0af874c64dfaf372e1df6f9969d427b1543399141000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgSpell Timothy Whiteaker correctly 2018-11-28 10:59:01 +0100b661eea5f0af874c64dfaf372e1df6f9969d427bSpell Timothy Whiteaker correctlyeditREADME.mdeditdocs/eml-contributors.mdsrc/test/resources/eml-sample.xml6c0da2874e96601bd440ed2c3de4fc59bf0414f51543438557000http://jenkins-ucsb-1.dataone.org/jenkins/user/ssfchongssfchongssfchong@gmail.comadd MeasurementType annotations to percent cover and biomass attributes Added the measurement type semantic annotations to the 'percent cover' (att.4) and 'biomass' (att.12) attributes. 2018-11-28 12:55:57 -08006c0da2874e96601bd440ed2c3de4fc59bf0414f5add MeasurementType annotations to percent cover and biomass attributeseditsrc/test/resources/eml-sample.xmldocs/eml-validation-refs.mdc99d23b522770fb2fed7bed1172b07c36f38091d1543516909000http://jenkins-ucsb-1.dataone.org/jenkins/user/stevan.earlstevan.earlstevan.earl@asu.eduminor grammatical edits to eml-validation-refs 2018-11-29 11:41:49 -0700c99d23b522770fb2fed7bed1172b07c36f38091dminor grammatical edits to eml-validation-refseditdocs/eml-validation-refs.mdxsd/eml-spatialReference.xsd8cacf06572ad3490bc6a07c8e4b7f3a4dcab7b961543674445000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix filename typo in schema docs. Fixes #326. 2018-12-01 15:27:25 +01008cacf06572ad3490bc6a07c8e4b7f3a4dcab7b96Fix filename typo in schema docs.editxsd/eml-spatialReference.xsdsrc/test/resources/eml-sample.xmllib/eml.jar3c7d8e341bf8a428b2f80bab28454f56eaa31ba21543780013000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgChanged annotation example to not reuse the packageId. Now the dataset has a different ID than the package, and I added annotation examples pointing at each. 2018-12-02 20:46:53 +01003c7d8e341bf8a428b2f80bab28454f56eaa31ba2Changed annotation example to not reuse the packageId.editsrc/test/resources/eml-sample.xmleditlib/eml.jarbin/prep_documentation.sh131dc542cb0133438b1d5d04557213f513c762491543857400000http://jenkins-ucsb-1.dataone.org/jenkins/user/mobmobmob@msi.ucsb.eduadding script to prep xsd files for generating documentation in Oxygen 2018-12-03 09:16:40 -0800131dc542cb0133438b1d5d04557213f513c76249adding script to prep xsd files for generating documentation in Oxygenaddbin/prep_documentation.shtmp/stmml.xsdtmp/eml-documentation.xsdtmp/eml-semantics.xsdtmp/eml-storedProcedure.xsdtmp/eml-spatialReference.xsdtmp/eml-text.xsdtmp/xml.xsdtmp/eml-dataTable.xsdtmp/eml-entity.xsdtmp/._oxygen_documentation_settings.xmltmp/eml-project.xsdtmp/eml-unitTypeDefinitions.xsdtmp/eml-methods.xsdtmp/eml-protocol.xsdtmp/eml-literature.xsdtmp/eml.xsdtmp/eml-view.xsdtmp/eml-software.xsdtmp/eml-physical.xsdtmp/eml-resource.xsdtmp/eml-attribute.xsdtmp/eml-coverage.xsdtmp/eml-access.xsdtmp/eml-spatialVector.xsdtmp/eml-constraint.xsdtmp/oxygen_documentation_settings.xmltmp/eml-dataset.xsdtmp/eml-party.xsdtmp/eml-spatialRaster.xsdcb64fe0ba868075fb8c000a518a05623206c33451543858133000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduadding the transformed files in a tmp dir 2018-12-03 09:28:53 -0800cb64fe0ba868075fb8c000a518a05623206c3345adding the transformed files in a tmp diraddtmp/eml-spatialVector.xsdaddtmp/eml-project.xsdaddtmp/eml-constraint.xsdaddtmp/eml-party.xsdaddtmp/eml-unitTypeDefinitions.xsdaddtmp/eml-literature.xsdaddtmp/eml-spatialRaster.xsdaddtmp/eml-documentation.xsdaddtmp/eml-entity.xsdaddtmp/eml.xsdaddtmp/._oxygen_documentation_settings.xmladdtmp/eml-physical.xsdaddtmp/eml-spatialReference.xsdaddtmp/eml-view.xsdaddtmp/eml-resource.xsdaddtmp/eml-coverage.xsdaddtmp/eml-methods.xsdaddtmp/eml-semantics.xsdaddtmp/eml-dataset.xsdaddtmp/eml-storedProcedure.xsdaddtmp/eml-dataTable.xsdaddtmp/eml-protocol.xsdaddtmp/eml-software.xsdaddtmp/eml-attribute.xsdaddtmp/stmml.xsdaddtmp/eml-text.xsdaddtmp/oxygen_documentation_settings.xmladdtmp/eml-access.xsdaddtmp/xml.xsdlib/eml.jarsrc/test/resources/invalidEML/eml-error4.xmlsrc/test/resources/invalidEML/eml-error-annot-ref-missing.xmlsrc/test/resources/invalidEML/eml-error-references.xmllib/sample/eml-sample.xmllib/sample/sampleLTERIntellectualRights.xmlsrc/test/resources/eml-data-paper.xmlsrc/test/resources/invalidEML/eml-datasetInvalidGringpoint.xmlsrc/test/resources/invalidEML/eml-error-annot-missing-id.xmlsrc/test/resources/invalidEML/eml-error3.xmlsrc/test/resources/invalidEML/eml-error1.xmlbuild.xmlsrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javasrc/test/resources/eml-unitDictionary.xmld44c143f0c44420ea1dab2d4fb2b7d0037c62be01543951449000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate tests to detect invalid files. Also add annotation tests for invalid files. Related to issue #328. 2018-12-04 14:24:09 -0500d44c143f0c44420ea1dab2d4fb2b7d0037c62be0Update tests to detect invalid files.editsrc/test/resources/invalidEML/eml-error-references.xmleditbuild.xmleditsrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javaeditsrc/test/resources/invalidEML/eml-error1.xmleditsrc/test/resources/invalidEML/eml-error3.xmldeletelib/sample/sampleLTERIntellectualRights.xmladdsrc/test/resources/invalidEML/eml-error-annot-missing-id.xmladdsrc/test/resources/invalidEML/eml-error-annot-ref-missing.xmldeletesrc/test/resources/eml-unitDictionary.xmldeletelib/sample/eml-sample.xmleditsrc/test/resources/eml-data-paper.xmleditsrc/test/resources/invalidEML/eml-datasetInvalidGringpoint.xmleditlib/eml.jareditsrc/test/resources/invalidEML/eml-error4.xmlsrc/test/resources/invalidEML/eml-datasetInvalidGringpoint.xmlsrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javalib/eml.jara7cc50c457f61a08f6b76a3281b8923cf79158a51543951449000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded test files for annotations. These tests are not passing, because they illustrate issues that the EML parser should deal with with annotation references but currently does not handle. 2018-12-04 14:24:09 -0500a7cc50c457f61a08f6b76a3281b8923cf79158a5Added test files for annotations.editlib/eml.jardeletesrc/test/resources/invalidEML/eml-datasetInvalidGringpoint.xmleditsrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javasrc/main/java/org/ecoinformatics/eml/EMLValidator.java41722e373ff01297410f42930f339159e067ed0c1543951449000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFirst thoughts on an alternative validator for EML-specific rules. 2018-12-04 14:24:09 -050041722e373ff01297410f42930f339159e067ed0cFirst thoughts on an alternative validator for EML-specific rules.addsrc/main/java/org/ecoinformatics/eml/EMLValidator.javasrc/main/java/org/ecoinformatics/eml/EMLValidator.javad6c9464fd81c51b0bcb96352a892ac1e4ea3c53c1543951449000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgMake validate() public. 2018-12-04 14:24:09 -0500d6c9464fd81c51b0bcb96352a892ac1e4ea3c53cMake validate() public.editsrc/main/java/org/ecoinformatics/eml/EMLValidator.javasrc/main/java/org/ecoinformatics/eml/EMLValidator.java7a0405fd3fe20a4fb4f2ceed7bf9d08f2a3560181543953006000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd packageId to the list of identifiers to be checked. 2018-12-04 14:50:06 -05007a0405fd3fe20a4fb4f2ceed7bf9d08f2a356018Add packageId to the list of identifiers to be checked.editsrc/main/java/org/ecoinformatics/eml/EMLValidator.javasrc/test/java/org/ecoinformatics/emltest/EMLValidatorTest.java8ecf01007c19794d2feea6974bf98755fe0e5c9b1543953387000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgStart a new EMLValidator class to replace EMLParser. This class is far more efficient, and does not require any namespace configuration. 2018-12-04 14:56:27 -05008ecf01007c19794d2feea6974bf98755fe0e5c9bStart a new EMLValidator class to replace EMLParser.addsrc/test/java/org/ecoinformatics/emltest/EMLValidatorTest.javalib/eml.jar97e8c76dedd134b690b760a3607a6c248cf619b71543973875000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded new jar for the EMLValidator. Note that the EMLValidator is not yet complete, but has a subset of the rules implemented. Which is why tests are not now passing. I will return to this shortly and finish off the rest of the validation rules. 2018-12-04 20:37:55 -050097e8c76dedd134b690b760a3607a6c248cf619b7Added new jar for the EMLValidator.editlib/eml.jardocs/eml-semantic-annotations-primer.md66e2bc673daaf318d4fb8dd99934745fe9487ba71544723121000http://jenkins-ucsb-1.dataone.org/jenkins/user/ssfchongssfchongssfchong@gmail.cominitial commit This is an outline for the semantic annotations primer documentation. 2018-12-13 09:45:21 -080066e2bc673daaf318d4fb8dd99934745fe9487ba7initial commitadddocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md1ceab640dffb4bf190ac0187dd9f25f0343107361544724473000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd examples to /eml/annotations and /eml/additionalMetadata Added EML examples to the /eml/annotations and /eml/additionalMetadata sections of the primer. 2018-12-13 10:07:53 -08001ceab640dffb4bf190ac0187dd9f25f034310736add examples to /eml/annotations and /eml/additionalMetadataeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md05332e0d5008b25c8136c2161070cf52a79ea78e1544727481000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd code sample to attribute annotation example Added an EML code snippet to demonstrate how EML attributes are annotated. 2018-12-13 10:58:01 -080005332e0d5008b25c8136c2161070cf52a79ea78eadd code sample to attribute annotation exampleeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdd60f2b6281ca4ad469ef37b9eaebca2e6a589b401544728538000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd example dataset annotation, fixed formatting Added sample code to show an annotation example in the dataset element. The spacing format in the EML attribute element sample code was also edited. 2018-12-13 11:15:38 -0800d60f2b6281ca4ad469ef37b9eaebca2e6a589b40add example dataset annotation, fixed formattingeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md0d225559ac2e3aa0cb9265d24ebe3e3bd1e009551544739797000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd draft of attribute annotation text In progress draft of the attribute annotation documentation 2018-12-13 14:23:17 -08000d225559ac2e3aa0cb9265d24ebe3e3bd1e00955add draft of attribute annotation texteditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md04c6d9a491ddc394994010f0d2a383577ca08dca1544747463000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd documentation to attribute annotation section Added documentation to the attribute annotation section. Also changed order of the document 2018-12-13 16:31:03 -080004c6d9a491ddc394994010f0d2a383577ca08dcaadd documentation to attribute annotation sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md4fd2f1a8290e895d7250ea05464bdbd8d48a68b21544751373000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit headings, and attribute, entity, and introduction sections Edited the headings, and attribute, entity, and introduction sections. 2018-12-13 17:36:13 -08004fd2f1a8290e895d7250ea05464bdbd8d48a68b2edit headings, and attribute, entity, and introduction sectionseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdf043d18cf6d3400fdfc83a027fe2b001f1ccea491544751671000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comdescribe containsMeasurementsOfType object property Added a sentence about oboe:containsMeasurementsOfType being a "default" object property for annotating measurements. 2018-12-13 17:41:11 -0800f043d18cf6d3400fdfc83a027fe2b001f1ccea49describe containsMeasurementsOfType object propertyeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mde59a4714e6370c768dcc1343c37f1e6e2fb18bc31544813739000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit attribute annotation text Edited the text for the attribute annotation section. 2018-12-14 10:55:39 -0800e59a4714e6370c768dcc1343c37f1e6e2fb18bc3edit attribute annotation texteditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md00815bebcad74a83ac3ba113c76ed0404e09156c1544821173000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd example for entity annotation Added a code snippet showing an example entity annotation. 2018-12-14 12:59:33 -080000815bebcad74a83ac3ba113c76ed0404e09156cadd example for entity annotationeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md86f259574075127e9d5817639adf1d37e3f798531544825295000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd entity-level annotation text Added text to the entity-level annotation section 2018-12-14 14:08:15 -080086f259574075127e9d5817639adf1d37e3f79853add entity-level annotation texteditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md91c2b45836260285d4c48941a1295a96ba6766721544828972000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit entity and attribute annotation sections Edited the text in the entity and attribute annotation sections 2018-12-14 15:09:32 -080091c2b45836260285d4c48941a1295a96ba676672edit entity and attribute annotation sectionseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdb03bc3754b7343e31da0c809a5f6ca0fdc2220511544832079000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit dataset section Added text to the dataset section. 2018-12-14 16:01:19 -0800b03bc3754b7343e31da0c809a5f6ca0fdc222051edit dataset sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md009c7f96d0e37736e2fd33a3dc652a807d73ebd31545073541000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd text to dataset section Added text that describes how to annotate datasets. 2018-12-17 11:05:41 -0800009c7f96d0e37736e2fd33a3dc652a807d73ebd3add text to dataset sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mde24c036d1f5b53644b2dcefc633b1c06bd5346351545079389000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd text to /eml/annotations section Added text to the /eml/annotations documentation. 2018-12-17 12:43:09 -0800e24c036d1f5b53644b2dcefc633b1c06bd534635add text to /eml/annotations sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdf6dc2b881a350acd6e3643339e1b548bd951063a1545081832000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd explanation of examples to /eml/annotations Added text explaining the annotation examples in the /eml/annotations section. 2018-12-17 13:23:52 -0800f6dc2b881a350acd6e3643339e1b548bd951063aadd explanation of examples to /eml/annotationseditdocs/eml-semantic-annotations-primer.mddocs/_bookdown.ymldocs/eml-semantic-annotations-primer.mdbf84a1574e37d061c116515941878a607c0a92e31545082808000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd the annotations primer to the gitbook. 2018-12-17 16:40:08 -0500bf84a1574e37d061c116515941878a607c0a92e3Add the annotations primer to the gitbook.editdocs/eml-semantic-annotations-primer.mdeditdocs/_bookdown.ymldocs/eml-semantic-annotations-primer.md25e5217a4ab51e10ca8a96c266148ecc6da5fbe61545155700000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd text to additionalMetadata section Added text to the additionalMetadata section. 2018-12-18 09:55:00 -080025e5217a4ab51e10ca8a96c266148ecc6da5fbe6add text to additionalMetadata sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md3f36ec905993e2eaed2c04b9184ce504e7b25a9b1545157088000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd text to the additionalMetadata section Added text to the additionalMetadata section 2018-12-18 10:18:08 -08003f36ec905993e2eaed2c04b9184ce504e7b25a9badd text to the additionalMetadata sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md25f6b567b1edf76e3b0d6526f28f1a2ca367c6a31545158304000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate text in the /eml/additionalMetadata section Added more text to the /eml/additionalMetadata section. 2018-12-18 10:38:24 -080025f6b567b1edf76e3b0d6526f28f1a2ca367c6a3update text in the /eml/additionalMetadata sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md82a5cb800e474ffbae81f7ce10f9d0facca0c0601545243843000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd introduction to primer Added introductory text to the semantic annotations primer. 2018-12-19 10:24:03 -080082a5cb800e474ffbae81f7ce10f9d0facca0c060add introduction to primereditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdb4cf461d1ec0a65739c78a7f235cc96d8b100cd51545260825000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd text to introduction Added text to the semantic annotations introduction section. 2018-12-19 15:07:05 -0800b4cf461d1ec0a65739c78a7f235cc96d8b100cd5add text to introductioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdeb8263e2bd5f5ec8c9456ac1d5c6c687e87bffaf1545264334000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comreorganize introduction Reorganized introduction section and created a separate section for Semantic Annotations in EML 2.2.0 2018-12-19 16:05:34 -0800eb8263e2bd5f5ec8c9456ac1d5c6c687e87bffafreorganize introductioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md434b9036063dddf9cf6c322affa43f5268b3ae961545268127000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate semantics in EML 2.2.0 section Updated the semantics in EML 2.2.0 section. 2018-12-19 17:08:47 -0800434b9036063dddf9cf6c322affa43f5268b3ae96update semantics in EML 2.2.0 sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mde18cc9e301e2d36e590d8c1808d478df68e6880b1545332876000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate headings and text Updated the headings and text for the Semantic Annotations in EML 2.2.0 section in the primer. 2018-12-20 11:07:56 -0800e18cc9e301e2d36e590d8c1808d478df68e6880bupdate headings and texteditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdaeed2a3623fa41d2c1f29e0e4fa1d00064b129351545333956000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comreorganize semantic annotations primer Reorganized the semantic annotations primer so that it flows better. 2018-12-20 11:25:56 -0800aeed2a3623fa41d2c1f29e0e4fa1d00064b12935reorganize semantic annotations primereditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md6865d196fb9b12453eb4ad1d83e4a00ac863b18f1545337636000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate semantic annotation primer Edited text in the Semantic Annotations in EML 2.2.0 section. 2018-12-20 12:27:16 -08006865d196fb9b12453eb4ad1d83e4a00ac863b18fupdate semantic annotation primereditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md440aef5d88126222be58be0da1dbbfd4a6717b001545341297000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdated semantic annotations primer Edited the semantic annotations primer. 2018-12-20 13:28:17 -0800440aef5d88126222be58be0da1dbbfd4a6717b00updated semantic annotations primereditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mddd03d73b80fb8a9f6b328f0dd563032126bdb6691545349588000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedited semantic annotations primer text Added references to other chapters and changed references to /eml/additionalMetadata and /eml/annotations. 2018-12-20 15:46:28 -0800dd03d73b80fb8a9f6b328f0dd563032126bdb669edited semantic annotations primer texteditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md7e135b07eb9b3c2c3f6127b0dfd2f0c2c39494411545351077000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate examples Updated the pattern examples in the semantic annotations primer. 2018-12-20 16:11:17 -08007e135b07eb9b3c2c3f6127b0dfd2f0c2c3949441update exampleseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md1d5d2e1133dae03092ba6f0943ad531ac13834a91545352342000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate generic examples Updated the generic examples 2018-12-20 16:32:22 -08001d5d2e1133dae03092ba6f0943ad531ac13834a9update generic exampleseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md64e5541b22ffcb2c3252653d4908a89bac18688d1545354789000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit semantic annotations primer Edited semantic annotations primer. 2018-12-20 17:13:09 -080064e5541b22ffcb2c3252653d4908a89bac18688dedit semantic annotations primereditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdad21a90f139696146c5341e68dedf4c8f6551f9d1545420375000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate examples and text Updated the text and EML examples in the semantic annotations primer 2018-12-21 11:26:15 -0800ad21a90f139696146c5341e68dedf4c8f6551f9dupdate examples and texteditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md55ffb403daa8cf27eed2f54dadfe61b196bf144e1545435641000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd label information Added information about the label attribute in the URIs 2018-12-21 15:40:41 -080055ffb403daa8cf27eed2f54dadfe61b196bf144eadd label informationeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mda7f24f1789e7511863c4b0967afa5533c5f938be1545439778000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comAdd label information Add label information to the semantic annotation primer. 2018-12-21 16:49:38 -0800a7f24f1789e7511863c4b0967afa5533c5f938beAdd label informationeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdd922943aa96ef250feb22ddf6bf7a6797e9e14171546075691000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate semantic annotations primer Edited text in semantic annotations primer. 2018-12-29 01:28:11 -0800d922943aa96ef250feb22ddf6bf7a6797e9e1417update semantic annotations primereditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md5500d53d96da861c008026009c48f28a30e5215c1546107711000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedited examples and text Added labels to the pattern examples. Made edits to the text 2018-12-29 10:21:51 -08005500d53d96da861c008026009c48f28a30e5215cedited examples and texteditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md1389f29ab202345e7a4f39adfbb794c7613c39f21546113687000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit annotation pattern examples Edited the annotation pattern examples so that they are more generic. 2018-12-29 12:01:27 -08001389f29ab202345e7a4f39adfbb794c7613c39f2edit annotation pattern exampleseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md56d05d9c1f9e9e6a3daf8e4e3a1d0a37c671d67c1546897718000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit example explanations Made the URIs clickable in the text that explained the examples. 2019-01-07 13:48:38 -080056d05d9c1f9e9e6a3daf8e4e3a1d0a37c671d67cedit example explanationseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md16047b0cdd3b9629224b760fe0080216d9d16c541546901627000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd references to data property Added references to data properties, in addition to object properties, when describing the propertyURI elements. 2019-01-07 14:53:47 -080016047b0cdd3b9629224b760fe0080216d9d16c54add references to data propertyeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md1235e11cca9a7538e55e5f8f40b0949ecff755601546909244000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd specific annotation example Added a more specific attribute-level annotation example and explanation after the dataset/entity/attribute pattern example. 2019-01-07 17:00:44 -08001235e11cca9a7538e55e5f8f40b0949ecff75560add specific annotation exampleeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdc0c07fc2274bc444d2a54b862cf70b4e235cd96b1546974146000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit dataset annotations section Edited the dataset annotation section. 2019-01-08 11:02:26 -0800c0c07fc2274bc444d2a54b862cf70b4e235cd96bedit dataset annotations sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md1bc11d0cc167e2baec28857413c6b94efdbf81c01546979140000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comproofreading edits Made proofreading edits. 2019-01-08 12:25:40 -08001bc11d0cc167e2baec28857413c6b94efdbf81c0proofreading editseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md8d3da64f528449c271e6c280e686698da404c28e1546988820000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comclarify explanations about subjects and ID values Clarified that the id attribute value itself is not the subject in a semantic statement, but rather refers to the subject. The subject is the element containing the id. 2019-01-08 15:07:00 -08008d3da64f528449c271e6c280e686698da404c28eclarify explanations about subjects and ID valueseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdd76011bdc15204c74c461b46782d92d222587b571547066366000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit example text Edited the text in one of the examples for clarity. 2019-01-09 12:39:26 -0800d76011bdc15204c74c461b46782d92d222587b57edit example texteditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md1d25b0c829b69cc5cdee7a200905bcfd1b6ede341547081193000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit and add more examples Edited the existing examples. Also added examples to better illustrate the pattern examples. 2019-01-09 16:46:33 -08001d25b0c829b69cc5cdee7a200905bcfd1b6ede34edit and add more exampleseditdocs/eml-semantic-annotations-primer.mdbin/build_schema_documentation.sh70994e8abcdc5bff07089b9e9260eaacd6c665c51547170535000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduadding a script to build schema documentation using Oxygen 2019-01-10 17:35:35 -080070994e8abcdc5bff07089b9e9260eaacd6c665c5adding a script to build schema documentation using Oxygenaddbin/build_schema_documentation.shbin/build_schema_documentation.sh7c60bc38f167223dbe93b2e0c259c95d3c0e82001547174507000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduadding script to build documentation 2019-01-10 18:41:47 -08007c60bc38f167223dbe93b2e0c259c95d3c0e8200adding script to build documentationeditbin/build_schema_documentation.shdocs/eml-semantic-annotations-primer.mdc10e03c59a27aa1ec7b4147d71ed9d46af0acbda1547836617000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit code blocks highlighting Edited the syntax highlighting in the pattern and example code blocks to make them easier to read. 2019-01-18 10:36:57 -0800c10e03c59a27aa1ec7b4147d71ed9d46af0acbdaedit code blocks highlightingeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdeb0dcb4eadbc255d017b73c0ef7911b1e54fb35b1547842439000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comclarify use of additionalMetadata element Clarified how the 'additionalMetadata' element is used, as per Bryce's comment. 2019-01-18 12:13:59 -0800eb0dcb4eadbc255d017b73c0ef7911b1e54fb35bclarify use of additionalMetadata elementeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md062f85e555bea8451de4d8958f9788efb49236931547847998000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit entity annotation section Made minor edits to the entity-level annotation section. 2019-01-18 13:46:38 -0800062f85e555bea8451de4d8958f9788efb4923693edit entity annotation sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md383a1cd592f8575b705d7759f52a98177fcd584e1547853421000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd relative links Added relative links to other sections of the bookdown. 2019-01-18 15:17:01 -0800383a1cd592f8575b705d7759f52a98177fcd584eadd relative linkseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md7b0faa8315ac26e98bc972a96c6948906fbf5bd81547855040000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comchange dataset to top-level resource Change the dataset-level section to top-level resource because other resources can also be annotated. 2019-01-18 15:44:00 -08007b0faa8315ac26e98bc972a96c6948906fbf5bd8change dataset to top-level resourceeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md0870d1a2415c71d4676d8afb9970ffe324487dad1547857689000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit headings and top-level resources section Edited the headings and the information about top-level resources. 2019-01-18 16:28:09 -08000870d1a2415c71d4676d8afb9970ffe324487dadedit headings and top-level resources sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md1b6adac8f8fc54ad91db30479e6199c8d62369411547858662000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit top-level resource section Combined the text from the pattern to the top-level resource section. 2019-01-18 16:44:22 -08001b6adac8f8fc54ad91db30479e6199c8d6236941edit top-level resource sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdb74474d3c9c27d7989708a13b794331da428e9791547859429000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit entity-level annotation section Combined the entity pattern text into the entity-level annotation section. 2019-01-18 16:57:09 -0800b74474d3c9c27d7989708a13b794331da428e979edit entity-level annotation sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md7e166649acf7b8a6d98b16d5f234422aec78e9d91547860220000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate annotations text Updated the top-level resource, entity-level and attribute sections. 2019-01-18 17:10:20 -08007e166649acf7b8a6d98b16d5f234422aec78e9d9update annotations texteditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md62c09eab48e29a945b8af6d36b8f74cdb7b04dce1547878983000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit attribute annotation text, remove pattern Edited the attribute annotation text section and removed the section on patterns for dataset, entity and attribute annotations. 2019-01-18 22:23:03 -080062c09eab48e29a945b8af6d36b8f74cdb7b04dceedit attribute annotation text, remove patterneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mde0a13eec3d4dfffa9492bcf733521c63755195ee1547880467000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit annotations element section Removed the pattern for the annotations element section and incorporated the text into the explanation. 2019-01-18 22:47:47 -0800e0a13eec3d4dfffa9492bcf733521c63755195eeedit annotations element sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdb69c1a7b8d2e23ddfbf471d04806f78a0310641f1547881391000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit additionalMetadata section Edited the additionalMetadata section and removed the annotation pattern. 2019-01-18 23:03:11 -0800b69c1a7b8d2e23ddfbf471d04806f78a0310641fedit additionalMetadata sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md84d7db1144063f23b0b7ff7a564997a0f9f910401548103116000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comclean up text Cleaned up some of the text in a few sections. 2019-01-21 12:38:36 -080084d7db1144063f23b0b7ff7a564997a0f9f91040clean up texteditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdf3235e0b1e2731b98de102b0128eaa0f53344ba81548182072000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit introduction Spiced up the introduction 2019-01-22 10:34:32 -0800f3235e0b1e2731b98de102b0128eaa0f53344ba8edit introductioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mddd6659f741fc6b9cbd29ad4e80dd0844542074041548191202000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit annotations section Edited the annotations element section 2019-01-22 13:06:42 -0800dd6659f741fc6b9cbd29ad4e80dd084454207404edit annotations sectioneditdocs/eml-semantic-annotations-primer.mdsrc/test/resources/eml-i18n.xml9d82237f7f647610dc3e835c183af3a4d29d44bf1548358531000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduin example, ref to ITIS is the IRI (URL) 2019-01-24 11:35:31 -08009d82237f7f647610dc3e835c183af3a4d29d44bfin example, ref to ITIS is the IRI (URL)editsrc/test/resources/eml-i18n.xmlbin/build_schema_documentation.shbin/oxygen_documentation_settings.xml3896ff8516451cde272b614ea81de31ef2d755cc1548386673000http://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishpetridish@gmail.comFix minor issues with Oxygen doc build script - Most major thing is that the config went from command line params to an external config (-cfg arg) which allows a little more tweaking than just the command line args - Fixed issue with final cp -r command that'd fail for me - Fixed various minor issues with string escaping and subprocesses - Added set -e and pipefail because bash 2019-01-24 18:24:33 -09003896ff8516451cde272b614ea81de31ef2d755ccFix minor issues with Oxygen doc build scripteditbin/build_schema_documentation.shaddbin/oxygen_documentation_settings.xmlxsd/eml-coverage.xsd916b5b31666b518badc825257c9a33da1812aa2c1548455101000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduexamples for taxonId are URIs 2019-01-25 14:25:01 -0800916b5b31666b518badc825257c9a33da1812aa2cexamples for taxonId are URIseditxsd/eml-coverage.xsdimg/eml-methods.pngimg/eml-dataset.pngimg/eml-entity.pngimg/eml-spatialReference.pngimg/eml-semantics.pngimg/eml-coverage.pngimg/eml-resource.pngimg/eml-dataTable.pngimg/eml-protocol.pngimg/eml.pngimg/eml-software.pngimg/eml-spatialVector.pngimg/eml-otherEntity.pngimg/eml-view.pngimg/eml-physical.pngimg/eml-award.pngimg/eml-attribute.pngimg/eml-spatialRaster.pngimg/eml-project.pngimg/eml-party.pngimg/eml-literature.pngimg/eml-access.pngimg/eml-constraint.pngimg/eml-text.pngimg/eml-storedProcedure.png04cf0d5ca692e1681281792af1ea1edd27b6ad531548458929000http://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishpetridish@gmail.comUpdate schema diagrams for 2.2.0 2019-01-25 14:28:49 -090004cf0d5ca692e1681281792af1ea1edd27b6ad53Update schema diagrams for 2.2.0editimg/eml-resource.pngeditimg/eml-methods.pngeditimg/eml-coverage.pngeditimg/eml-text.pngeditimg/eml-spatialVector.pngaddimg/eml-otherEntity.pngeditimg/eml-protocol.pngeditimg/eml-attribute.pngaddimg/eml-award.pngeditimg/eml-storedProcedure.pngaddimg/eml-semantics.pngeditimg/eml-dataTable.pngeditimg/eml-party.pngeditimg/eml-spatialRaster.pngeditimg/eml.pngeditimg/eml-view.pngeditimg/eml-entity.pngeditimg/eml-software.pngeditimg/eml-physical.pngeditimg/eml-spatialReference.pngeditimg/eml-access.pngeditimg/eml-literature.pngeditimg/eml-constraint.pngeditimg/eml-dataset.pngeditimg/eml-project.pngxsd/eml-unitTypeDefinitions.xsdeab57e9495524750b5444812818d59fd7570474b1548460166000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduupdated unit enumeration 2019-01-25 15:49:26 -0800eab57e9495524750b5444812818d59fd7570474bupdated unit enumerationeditxsd/eml-unitTypeDefinitions.xsdxsd/eml-unitTypeDefinitions.xsd9e55c97fcd548b0ef92dafc3a7a59e8a246845af1548912779000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd angle units to unit enumeration so validation works. Now degree, radian, steradian, grad are all back in the standard unit list. 2019-01-30 21:32:59 -08009e55c97fcd548b0ef92dafc3a7a59e8a246845afAdd angle units to unit enumeration so validation works.editxsd/eml-unitTypeDefinitions.xsdsrc/test/resources/invalidEML/eml-error-annot-missing-id.xmlsrc/test/java/org/ecoinformatics/emltest/EMLValidatorTest.javalib/eml.jarsrc/main/java/org/ecoinformatics/eml/EMLValidator.javaa25c845a9819e631b88ae4405f7b8045c8667e031548925324000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFirst pass at new EML Validator. Implements newly clarified validation rules that go beyond the normal schema validation. 2019-01-31 01:02:04 -0800a25c845a9819e631b88ae4405f7b8045c8667e03First pass at new EML Validator.editlib/eml.jareditsrc/test/java/org/ecoinformatics/emltest/EMLValidatorTest.javaeditsrc/main/java/org/ecoinformatics/eml/EMLValidator.javaeditsrc/test/resources/invalidEML/eml-error-annot-missing-id.xmllib/eml.jarsrc/main/java/org/ecoinformatics/eml/EMLValidator.java5036bfaefe28cbb9b6002d108d002987c166c9b71548927507000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgReformat and document EMLValidator. 2019-01-31 01:38:27 -08005036bfaefe28cbb9b6002d108d002987c166c9b7Reformat and document EMLValidator.editsrc/main/java/org/ecoinformatics/eml/EMLValidator.javaeditlib/eml.jarsrc/test/resources/eml-literatureInPress.xmlsrc/test/resources/moduleEML/eml-party.xmlsrc/test/resources/eml-software.xmlsrc/test/resources/eml-physical-inline.xmlsrc/test/resources/eml-offline.xmlsrc/test/resources/moduleEML/eml-access.xmlsrc/test/resources/moduleEML/eml-method.xmlsrc/test/resources/moduleEML/eml-inline.xmlsrc/test/resources/eml-access.xmlsrc/test/resources/moduleEML/eml-view.xmlsrc/test/resources/eml-semantics.xmlsrc/test/resources/eml-attribute.xmlsrc/test/resources/eml-view.xmlsrc/test/resources/eml-project.xmlsrc/test/resources/moduleEML/eml-physical-inline.xmlsrc/test/resources/eml-protocol.xmlsrc/test/resources/eml-physical.xmlsrc/test/resources/moduleEML/eml-literature.xmlsrc/test/resources/moduleEML/eml-physical.xmlsrc/test/resources/moduleEML/eml-protocol.xmlsrc/test/resources/eml-inline.xmlsrc/test/resources/moduleEML/eml-spatialVector.xmlsrc/test/resources/eml-entity.xmlsrc/test/resources/eml-dataset.xmlsrc/test/resources/moduleEML/eml-dataTable.xmlsrc/test/resources/eml-text.xmlsrc/test/resources/moduleEML/eml-offline.xmlsrc/test/java/org/ecoinformatics/emltest/SaxValidateTest.javasrc/test/resources/eml-method.xmlsrc/test/resources/moduleEML/eml-semantics.xmlsrc/test/resources/moduleEML/eml-attribute.xmlsrc/test/resources/eml-physical-inline-cdatasection.xmlsrc/test/resources/moduleEML/eml-text.xmlsrc/test/resources/moduleEML/eml-literatureInPress.xmllib/eml.jarsrc/test/resources/moduleEML/eml-2.1.1-all-units.xmlsrc/test/resources/moduleEML/eml-dataset.xmlsrc/test/resources/eml-2.1.1-all-units.xmlsrc/test/resources/moduleEML/eml-physical-inline-cdatasection.xmlsrc/test/resources/eml-dataTable.xmlsrc/test/resources/moduleEML/eml-software.xmlsrc/test/resources/eml-storedProcedure.xmlsrc/test/resources/eml-literature.xmlsrc/test/resources/eml-spatialVector.xmlsrc/test/resources/moduleEML/eml-storedProcedure.xmlsrc/test/resources/eml-party.xmlsrc/test/resources/moduleEML/eml-project.xmlsrc/test/resources/moduleEML/eml-entity.xml85b8b8df6c403a3d3c5e090556313d805a1ab9731548929298000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgMoved EML module files to new subdirectory. Now the main test directory contains only complete EML files. Module level files should go into moduleEML, and will only be tested against the SAX parser, as they will no longer pass the test for EMLValidator. 2019-01-31 02:08:18 -080085b8b8df6c403a3d3c5e090556313d805a1ab973Moved EML module files to new subdirectory.addsrc/test/resources/moduleEML/eml-physical-inline-cdatasection.xmldeletesrc/test/resources/eml-access.xmladdsrc/test/resources/moduleEML/eml-protocol.xmldeletesrc/test/resources/eml-literature.xmladdsrc/test/resources/moduleEML/eml-storedProcedure.xmldeletesrc/test/resources/eml-literatureInPress.xmladdsrc/test/resources/moduleEML/eml-spatialVector.xmladdsrc/test/resources/moduleEML/eml-method.xmldeletesrc/test/resources/eml-spatialVector.xmladdsrc/test/resources/moduleEML/eml-literatureInPress.xmldeletesrc/test/resources/eml-offline.xmladdsrc/test/resources/moduleEML/eml-party.xmladdsrc/test/resources/moduleEML/eml-access.xmldeletesrc/test/resources/eml-software.xmldeletesrc/test/resources/eml-physical-inline-cdatasection.xmldeletesrc/test/resources/eml-physical.xmldeletesrc/test/resources/eml-dataset.xmladdsrc/test/resources/moduleEML/eml-dataset.xmladdsrc/test/resources/moduleEML/eml-attribute.xmladdsrc/test/resources/moduleEML/eml-literature.xmladdsrc/test/resources/moduleEML/eml-inline.xmldeletesrc/test/resources/eml-inline.xmldeletesrc/test/resources/eml-view.xmldeletesrc/test/resources/eml-dataTable.xmldeletesrc/test/resources/eml-protocol.xmldeletesrc/test/resources/eml-text.xmladdsrc/test/resources/moduleEML/eml-physical.xmldeletesrc/test/resources/eml-party.xmladdsrc/test/resources/moduleEML/eml-project.xmladdsrc/test/resources/moduleEML/eml-view.xmladdsrc/test/resources/moduleEML/eml-semantics.xmladdsrc/test/resources/moduleEML/eml-software.xmleditsrc/test/java/org/ecoinformatics/emltest/SaxValidateTest.javaaddsrc/test/resources/moduleEML/eml-dataTable.xmladdsrc/test/resources/moduleEML/eml-physical-inline.xmldeletesrc/test/resources/eml-attribute.xmldeletesrc/test/resources/eml-storedProcedure.xmldeletesrc/test/resources/eml-physical-inline.xmladdsrc/test/resources/moduleEML/eml-text.xmldeletesrc/test/resources/eml-2.1.1-all-units.xmladdsrc/test/resources/moduleEML/eml-2.1.1-all-units.xmldeletesrc/test/resources/eml-entity.xmleditlib/eml.jaraddsrc/test/resources/moduleEML/eml-entity.xmldeletesrc/test/resources/eml-semantics.xmldeletesrc/test/resources/eml-method.xmladdsrc/test/resources/moduleEML/eml-offline.xmldeletesrc/test/resources/eml-project.xmlsrc/test/resources/eml-datasetWithCitation.xml6f3297eb54a9a6a3ed0dcbc2cb7b8650817c24961548929857000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRemove whitespace in describes that caused validation error. 2019-01-31 02:17:37 -08006f3297eb54a9a6a3ed0dcbc2cb7b8650817c2496Remove whitespace in describes that caused validation error.editsrc/test/resources/eml-datasetWithCitation.xmllib/eml.jarsrc/main/java/org/ecoinformatics/eml/EMLValidator.javacc8e3edfdbfcf919337f112622215bdfb37bb5c41548929897000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix XPath in validator to properly access all describes fields. 2019-01-31 02:18:17 -0800cc8e3edfdbfcf919337f112622215bdfb37bb5c4Fix XPath in validator to properly access all describes fields.editsrc/main/java/org/ecoinformatics/eml/EMLValidator.javaeditlib/eml.jarsrc/main/java/org/ecoinformatics/eml/EMLParserServlet.java53b4d28972a27c41f1ccdfe1f910e76c4e2e89151548930405000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgReformat Servlet for consistency. 2019-01-31 02:26:45 -080053b4d28972a27c41f1ccdfe1f910e76c4e2e8915Reformat Servlet for consistency.editsrc/main/java/org/ecoinformatics/eml/EMLParserServlet.javasrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javasrc/main/java/org/ecoinformatics/eml/EMLParser.javasrc/main/java/org/ecoinformatics/eml/EMLParserException.java7e3a980057cd19acf8103c4e45b9a6d4182dc9861548934552000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgGot rid of EMLParser, replaced by EMLValidator. 2019-01-31 03:35:52 -08007e3a980057cd19acf8103c4e45b9a6d4182dc986Got rid of EMLParser, replaced by EMLValidator.deletesrc/main/java/org/ecoinformatics/eml/EMLParserException.javadeletesrc/main/java/org/ecoinformatics/eml/EMLParser.javadeletesrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javasrc/test/java/org/ecoinformatics/emltest/EMLValidatorTest.javasrc/main/java/org/ecoinformatics/eml/EMLValidator.javadc3b5bb5acd7ee7094d63bb898c3998d043167f31548934630000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded getErrors() function to EMLValidator to return full lisst of errors. This allows a whole doc to be validated without pausing. 2019-01-31 03:37:10 -0800dc3b5bb5acd7ee7094d63bb898c3998d043167f3Added getErrors() function to EMLValidator to return full lisst ofeditsrc/main/java/org/ecoinformatics/eml/EMLValidator.javaeditsrc/test/java/org/ecoinformatics/emltest/EMLValidatorTest.javalib/eml.jarsrc/main/java/org/ecoinformatics/eml/EMLParserServlet.java3c60e3620b0604969ed3f84043f6af98bd8beb821548934658000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRefactored EMLParserServlet to use EMLValidator now. 2019-01-31 03:37:38 -08003c60e3620b0604969ed3f84043f6af98bd8beb82Refactored EMLParserServlet to use EMLValidator now.editsrc/main/java/org/ecoinformatics/eml/EMLParserServlet.javaeditlib/eml.jar.travis.yml431d9b8d6d60e21b0720fb9b051e30734760ea261548934853000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate travis with new location of sample file. 2019-01-31 03:40:53 -0800431d9b8d6d60e21b0720fb9b051e30734760ea26Update travis with new location of sample file.edit.travis.ymlsrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javasrc/main/java/org/ecoinformatics/eml/EMLParser.javasrc/main/java/org/ecoinformatics/eml/EMLParserException.java26af18e106752cb75cc3f8f96984b3410dfbfb361548997331000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRestore the EMLParser, exceptions, and tests. In the process, cleaned up some of the dead code, and modified tests sso that EMLParserTest doesn't fail on invalid docs. Next step is to refactor EMLParser to use EMLValidator for EML 2.2.0 and later docs. 2019-01-31 21:02:11 -080026af18e106752cb75cc3f8f96984b3410dfbfb36Restore the EMLParser, exceptions, and tests.addsrc/main/java/org/ecoinformatics/eml/EMLParser.javaaddsrc/main/java/org/ecoinformatics/eml/EMLParserException.javaaddsrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javasrc/main/java/org/ecoinformatics/eml/SAXValidate.javasrc/main/java/org/ecoinformatics/eml/EMLParserServlet.javasrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javalib/eml.jardd04329037ebcfbfce2c5023b03c943cfd8961b41548997378000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgClean up dead code and make tests work. 2019-01-31 21:02:58 -0800dd04329037ebcfbfce2c5023b03c943cfd8961b4Clean up dead code and make tests work.editsrc/main/java/org/ecoinformatics/eml/EMLParserServlet.javaeditlib/eml.jareditsrc/main/java/org/ecoinformatics/eml/SAXValidate.javaeditsrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javasrc/main/java/org/ecoinformatics/eml/SAXValidate.javalib/eml.jarsrc/main/java/org/ecoinformatics/eml/EMLParser.javasrc/main/java/org/ecoinformatics/eml/EMLParserException.javad2d2137270c52ced3028ce5ee0cd72aed65302151548997748000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgReformat parser code for consistency with NCEAS style. 2019-01-31 21:09:08 -0800d2d2137270c52ced3028ce5ee0cd72aed6530215Reformat parser code for consistency with NCEAS style.editsrc/main/java/org/ecoinformatics/eml/SAXValidate.javaeditsrc/main/java/org/ecoinformatics/eml/EMLParserException.javaeditlib/eml.jareditsrc/main/java/org/ecoinformatics/eml/EMLParser.javasrc/main/java/org/ecoinformatics/eml/EMLParser.javasrc/main/java/org/ecoinformatics/eml/SemVersion.java13f28fc7e3e5ef39b1a069ae5e44dc4d2626dc3b1549004706000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgBegin refactoring EMLParser constructors. Partially complete, mostly consolidated duplicated code, and began setting up for the namespace comparisons. 2019-01-31 23:05:06 -080013f28fc7e3e5ef39b1a069ae5e44dc4d2626dc3bBegin refactoring EMLParser constructors.editsrc/main/java/org/ecoinformatics/eml/EMLParser.javaaddsrc/main/java/org/ecoinformatics/eml/SemVersion.javasrc/test/resources/stmml_dictionaryWithDefintion.xmlsrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javasrc/main/java/org/ecoinformatics/eml/EMLParser.javalib/eml.jarsrc/test/resources/moduleEML/stmml_dictionaryWithDefintion.xmla8a201082e0972de1d361ab235d5a1e1cb09e32d1549148299000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRefactor EMLParsser to use EMLValidator. When EMLParsser is called, delegate to EMLValidator for versions of EML after 2.2.0. Still need to handle String constructor. 2019-02-02 14:58:19 -0800a8a201082e0972de1d361ab235d5a1e1cb09e32dRefactor EMLParsser to use EMLValidator.addsrc/test/resources/moduleEML/stmml_dictionaryWithDefintion.xmleditsrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javaeditsrc/main/java/org/ecoinformatics/eml/EMLParser.javaeditlib/eml.jardeletesrc/test/resources/stmml_dictionaryWithDefintion.xmlsrc/main/java/org/ecoinformatics/eml/EMLParserServlet.javasrc/test/java/org/ecoinformatics/emltest/EMLValidatorTest.javalib/eml.jarsrc/main/java/org/ecoinformatics/eml/EMLParser.javasrc/main/java/org/ecoinformatics/eml/EMLValidator.java64746ce005c0c15e9336d27d87c730f8f3300ed31549149097000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgSwitch EMLValidator to using File param in constructor. 2019-02-02 15:11:37 -080064746ce005c0c15e9336d27d87c730f8f3300ed3Switch EMLValidator to using File param in constructor.editlib/eml.jareditsrc/test/java/org/ecoinformatics/emltest/EMLValidatorTest.javaeditsrc/main/java/org/ecoinformatics/eml/EMLParserServlet.javaeditsrc/main/java/org/ecoinformatics/eml/EMLParser.javaeditsrc/main/java/org/ecoinformatics/eml/EMLValidator.javasrc/test/java/org/ecoinformatics/emltest/EMLValidatorTest.javalib/eml.jarsrc/main/java/org/ecoinformatics/eml/EMLValidator.java157ce351aa2b343a952a789c408e0296321e0a6a1549150950000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd new EMLValidator constructor to work on String inputs. 2019-02-02 15:42:30 -0800157ce351aa2b343a952a789c408e0296321e0a6aAdd new EMLValidator constructor to work on String inputs.editlib/eml.jareditsrc/main/java/org/ecoinformatics/eml/EMLValidator.javaeditsrc/test/java/org/ecoinformatics/emltest/EMLValidatorTest.javasrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javalib/eml.jarsrc/main/java/org/ecoinformatics/eml/EMLParser.java4dbbb1558b3ac63552f074ad7db3916c11b6227e1549153790000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgWhen parsing a String using EMLParser, delegate to EMLValidator. Now EMLValidator is used for validating from the String constructor to EMLParser(String) in addition to the File constructor, at least for EML after 2.2.0. 2019-02-02 16:29:50 -08004dbbb1558b3ac63552f074ad7db3916c11b6227eWhen parsing a String using EMLParser, delegate to EMLValidator.editsrc/test/java/org/ecoinformatics/emltest/EMLParserTest.javaeditlib/eml.jareditsrc/main/java/org/ecoinformatics/eml/EMLParser.javasrc/main/java/org/ecoinformatics/eml/EMLParser.javalib/eml.jar200ec429283a0f6a85d7d6e27d3673f5e64301ef1549154601000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgDeprecate EMLParser, use EMLValidator instead. 2019-02-02 16:43:21 -0800200ec429283a0f6a85d7d6e27d3673f5e64301efDeprecate EMLParser, use EMLValidator instead.editsrc/main/java/org/ecoinformatics/eml/EMLParser.javaeditlib/eml.jarsrc/main/java/org/ecoinformatics/eml/SAXValidate.javasrc/main/resources/config.xmllib/eml.jarsrc/test/java/org/ecoinformatics/emltest/SaxValidateTest.javaff1642c7f35b55dd4e3d8361f6c653a5acc898301549160650000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded 2.2.0 to the namespaces config variable. This broke the tests because the schemas are not on ecoinfo yet, and so I added code to the JUnit tests to determine the current release version being tested and instead use the local `xsd/eml.xsd` file for that namespace. 2019-02-02 18:24:10 -0800ff1642c7f35b55dd4e3d8361f6c653a5acc89830Added 2.2.0 to the namespaces config variable.editsrc/main/resources/config.xmleditsrc/main/java/org/ecoinformatics/eml/SAXValidate.javaeditlib/eml.jareditsrc/test/java/org/ecoinformatics/emltest/SaxValidateTest.javabuild.xml515664e997937f9472d6eeec03641c58cde169f01549160690000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd env to build for 2.2.0. 2019-02-02 18:24:50 -0800515664e997937f9472d6eeec03641c58cde169f0Add env to build for 2.2.0.editbuild.xmldocs/eml-semantic-annotations-primer.mdd7ad9925f20e2d3d2acb907dce1060a20101cf8b1549565902000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edure-organized some text on primer: moved highights for each annot location to lists, broke up paragraphs. Added place-holder sections for RDF examples, and checking logic. I think were gonna need a TOC 2019-02-07 10:58:22 -0800d7ad9925f20e2d3d2acb907dce1060a20101cf8bre-organized some text on primer: moved highights for each annoteditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md5ed6bbdbf7088f2c98a5453cbda1c31707346b5c1549581485000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit text and formatting Proofread text and fixed made changes to some of the formatting. 2019-02-07 15:18:05 -08005ed6bbdbf7088f2c98a5453cbda1c31707346b5cedit text and formattingeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md9ef26e2dca2c6aad90ceb2de81f189d40fd9fea01549588329000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedited section titles 2019-02-07 17:12:09 -08009ef26e2dca2c6aad90ceb2de81f189d40fd9fea0edited section titleseditdocs/eml-semantic-annotations-primer.mdpom.xml361fc30674a7e647163a5cac3b24bb65202c96441549684020000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduAdd the dataone maven repository. Change the utilities version from 2.0.0-snapshot to 2.0.0. NEED TODO: change the version of the library from 0.9.1-snapshot to 0.9.1. 2019-02-08 19:47:00 -0800361fc30674a7e647163a5cac3b24bb65202c9644Add the dataone maven repository. Change the utilities version fromeditpom.xmlpom.xml723ebb41299a3eb519686f914b7879ba638a5ef01549927491000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduChange the version of this project from 0.9.1-snapshot to 0.9.1. 2019-02-11 15:24:51 -0800723ebb41299a3eb519686f914b7879ba638a5ef0Change the version of this project from 0.9.1-snapshot to 0.9.1.editpom.xmldocs/eml-semantic-annotations-primer.mdf7c6f35679b2766d72368a931642f442ee50a6d51550689260000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduadded examples of what-not-to-do and logical consistency 2019-02-20 11:01:00 -0800f7c6f35679b2766d72368a931642f442ee50a6d5added examples of what-not-to-do and logical consistencyeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mddocs/images/RDF_example_a.pngdocs/images/RDF_example_b.png03f6aea88553516823dd11137ff17067910dc7011550693369000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduadding example graphs and refs 2019-02-20 12:09:29 -080003f6aea88553516823dd11137ff17067910dc701adding example graphs and refsadddocs/images/RDF_example_b.pngeditdocs/eml-semantic-annotations-primer.mdadddocs/images/RDF_example_a.pngdocs/eml-semantic-annotations-primer.mdce8d4f2973dc4558670f0e12ade76f96a8868c5c1550694085000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduheadings have consistent levels; added more caveats 2019-02-20 12:21:25 -0800ce8d4f2973dc4558670f0e12ade76f96a8868c5cheadings have consistent levels; added more caveatseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md5f002933d306f32d2927a850a24d9b45b0e206e01550694443000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edufinished the table of triple components 2019-02-20 12:27:23 -08005f002933d306f32d2927a850a24d9b45b0e206e0finished the table of triple componentseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdee6d0d1e8e71456d027a4d7011a21dcf5a235ea11550694733000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduparagraph describing what an RDF graph is 2019-02-20 12:32:13 -0800ee6d0d1e8e71456d027a4d7011a21dcf5a235ea1paragraph describing what an RDF graph iseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdac84b7a4fe9200dad0812b86b7a5ab4b2ed9b9b61550694814000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduok, had to fix spacing around pngs 2019-02-20 12:33:34 -0800ac84b7a4fe9200dad0812b86b7a5ab4b2ed9b9b6ok, had to fix spacing around pngseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md308bf5c3bcb8f6f835ac64b6bcf4695f312d03d61550784223000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfixed typos, minor format changes Fixed typos, made minor format changes. 2019-02-21 13:23:43 -0800308bf5c3bcb8f6f835ac64b6bcf4695f312d03d6fixed typos, minor format changeseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md675f8fd8aad5f60d31a3797f10aa04b5286c301c1550788153000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd RDF/XML examples Added RDF/XML examples. 2019-02-21 14:29:13 -0800675f8fd8aad5f60d31a3797f10aa04b5286c301cadd RDF/XML exampleseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md4a2b8d31c8ed2df24af0b2df485be94d59eb5a8d1550788401000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfixed typo and formatting Fixed typo and formatting 2019-02-21 14:33:21 -08004a2b8d31c8ed2df24af0b2df485be94d59eb5a8dfixed typo and formattingeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mde4f59e573baf8380cb58be39fbdfa03b83102f361550864953000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd terms to glossary Added terms and definitions to the glossary section. 2019-02-22 11:49:13 -0800e4f59e573baf8380cb58be39fbdfa03b83102f36add terms to glossaryeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md378da2c9a0bb89f1b839e7a5c23509a974a3e9e41550877299000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd URL vs URI information Added a section explaining the difference between URIs and URLs. 2019-02-22 15:14:59 -0800378da2c9a0bb89f1b839e7a5c23509a974a3e9e4add URL vs URI informationeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mddf0d06c0930fd67dc503dcce68eaa3a2d94369231550878009000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfixed RDF examples Added closing brackets to the RDF examples. 2019-02-22 15:26:49 -0800df0d06c0930fd67dc503dcce68eaa3a2d9436923fixed RDF exampleseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mddf934753c7771cb6cd49805e108aa754beac6ce91551210757000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdated primer, but Steven had also made revs made some changes to top 65 lines or so, especially regarding setting up concrete example of an RDF triple, and talking about URI's and URL's 2019-02-26 11:52:37 -0800df934753c7771cb6cd49805e108aa754beac6ce9updated primer, but Steven had also made revseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md46c14108f4fd3609ad62a6a32c128934c9e138901551211701000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadded the glossary terms again, fixed typo Added back the glossary terms and fixed a typo. 2019-02-26 12:08:21 -080046c14108f4fd3609ad62a6a32c128934c9e13890added the glossary terms again, fixed typoeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mda6fc613966c7c30146e69ffad29970cca131db611551213232000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfixed RDF examples Fixed typos in the RDF examples. 2019-02-26 12:33:52 -0800a6fc613966c7c30146e69ffad29970cca131db61fixed RDF exampleseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdbf107e28a871de4d26579c64c0a646ae8e04fa861551215942000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfixed formatting Made some formatting changes. 2019-02-26 13:19:02 -0800bf107e28a871de4d26579c64c0a646ae8e04fa86fixed formattingeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdf589d4df9858ab9e1f420236333a43c73e676aae1551225054000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comsome further revs to intro section tried to make intro section a synoptic statement of the motivation and approach for enabling semantic annotation of EML, with a simple concrete example of an RDF triple, and how URI's provide very powerful annotations onto EML elements. 2019-02-26 15:50:54 -0800f589d4df9858ab9e1f420236333a43c73e676aaesome further revs to intro sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md0ee71ae45b163c907b4f238de49f4cadf781e20d1551225463000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfixed example JRN URL to resolve more usefully 2019-02-26 15:57:43 -08000ee71ae45b163c907b4f238de49f4cadf781e20dfixed example JRN URL to resolve more usefullyeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdaa11610f51e9b4f945834873e87e3f5e69026ceb1551225625000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfixed JRN dataset URL again... ... to resolve more usefully. It is tough knowing which URL denotes the data package due to lack of content negotiation... 2019-02-26 16:00:25 -0800aa11610f51e9b4f945834873e87e3f5e69026cebfixed JRN dataset URL again...editdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdd58deb57e45c01efdac1f2096070a9644a6760291551226257000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comsmall fixes 2019-02-26 16:10:57 -0800d58deb57e45c01efdac1f2096070a9644a676029small fixeseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdd728810ad1d35a4d6521ff42b73e3236385bc20e1551230916000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comchanged predicate URI in first example the RO predicate for "located in" way more popular than PATO one 2019-02-26 17:28:36 -0800d728810ad1d35a4d6521ff42b73e3236385bc20echanged predicate URI in first exampleeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdc6077132d7fab8725e693aa9d29e82fd4b26493e1551235232000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comset subject (a jrn dataset) to pasta id. agree with @mbjones - this was a web portal URL. the pasta ID is down the page a bit. should we consider the DOI here instead? 2019-02-26 18:40:32 -0800c6077132d7fab8725e693aa9d29e82fd4b26493eset subject (a jrn dataset) to pasta id.editdocs/eml-semantic-annotations-primer.mddocs/eml-220info.md64cfdd8c9b53f0d528be0528878256dc28ae46d51551239339000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadded link to annotation primer 2019-02-26 19:48:59 -080064cfdd8c9b53f0d528be0528878256dc28ae46d5added link to annotation primereditdocs/eml-220info.mddocs/eml-semantic-annotations-primer.mdce18e96624370cb6bc78c95ee4faaa486ec828fe1551295440000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadded @cboettig's ref on tidy and R 2019-02-27 11:24:00 -0800ce18e96624370cb6bc78c95ee4faaa486ec828feadded @cboettig's ref on tidy and Reditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md4f7a1bf31c5e4f0c0bfee6c876e9475d53207e731551727662000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadded more detail to the basic triple example described a bit more detail regarding the simple triple example introduced early in the Primer (ca. lines 50-65) 2019-03-04 11:27:42 -08004f7a1bf31c5e4f0c0bfee6c876e9475d53207e73added more detail to the basic triple exampleeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md157b6717119f03285ac799a91dafe657cd0616c11551729260000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comsmall revisions to intro wording trying to further clarify document in lines 25-70 2019-03-04 11:54:20 -0800157b6717119f03285ac799a91dafe657cd0616c1small revisions to intro wordingeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md1e4ea462764644a78bc419d2ddae8d83e54d04eb1551825505000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comminor edits 2019-03-05 14:38:25 -08001e4ea462764644a78bc419d2ddae8d83e54d04ebminor editseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md5c863c13b19d0c0e0d12db574689fc4373aafefd1551826605000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comcondensed annotation explantations Condensed the sections on top-level resource, entity-level, and attribute annotations. 2019-03-05 14:56:45 -08005c863c13b19d0c0e0d12db574689fc4373aafefdcondensed annotation explantationseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md076ddca29073da85d469c2e4227c5cab2320c8ce1551828507000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit eml/annotations section Edited the eml/annotations section and removed some repetitive text about propertyURI and valueURI elements 2019-03-05 15:28:27 -0800076ddca29073da85d469c2e4227c5cab2320c8ceedit eml/annotations sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdf6fe67a9c111ea47a22309ee4bcd2a803ad131a91551829471000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit eml/additionalMetadata section 2019-03-05 15:44:31 -0800f6fe67a9c111ea47a22309ee4bcd2a803ad131a9edit eml/additionalMetadata sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md407f160af122c8abdd2af7c094aaf7f1efa31e091551830029000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comremoved semi-colons 2019-03-05 15:53:49 -0800407f160af122c8abdd2af7c094aaf7f1efa31e09removed semi-colonseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md27668e9aab26b0b7841aedda1a106af7fb60408f1551833083000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comtry commit after Chong commits minor changes 2019-03-05 16:44:43 -080027668e9aab26b0b7841aedda1a106af7fb60408ftry commit after Chong commitseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md8489749daecc7dd8b27a2e6dcfa741ad6740e5661551833125000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comgrammar fix minor 2019-03-05 16:45:25 -08008489749daecc7dd8b27a2e6dcfa741ad6740e566grammar fixeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md742d82d0e77f0135312a8180b749b1d71aa32cf71551833353000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfixed URI to resolve 2019-03-05 16:49:13 -0800742d82d0e77f0135312a8180b749b1d71aa32cf7fixed URI to resolveeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdf1a559bec51cdf38ec4266be087e23c9f17c551c1551834316000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comremoved namespace prefix prefixes allowed in TTL but not N-Triple -- but N-Triple is simplest syntax to understand so keep 2019-03-05 17:05:16 -0800f1a559bec51cdf38ec4266be087e23c9f17c551cremoved namespace prefixeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdf707d2c5bc367ec89591e2ea9c95e5a7d8505dfc1551834925000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comgrammar 2019-03-05 17:15:25 -0800f707d2c5bc367ec89591e2ea9c95e5a7d8505dfcgrammareditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mddb251870d950c3a6d223a9eb43d22182b74ff6c71551835025000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comgrammar 2019-03-05 17:17:05 -0800db251870d950c3a6d223a9eb43d22182b74ff6c7grammareditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mda5c844369e49354f9b606e27ef81f338c57d2d501551838401000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comclarifying object property is a predicate ...trying to avoid confusion about words: subject, predicate, object-- e.g. using "subject" as a predicate, or referring to a predicate as an "object property"-- even though these are valid uses... 2019-03-05 18:13:21 -0800a5c844369e49354f9b606e27ef81f338c57d2d50clarifying object property is a predicateeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md8562d4f571266ca52aa835fbd7b43c0d4dea45561551902457000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdated subject URI in initial example 2019-03-06 12:00:57 -08008562d4f571266ca52aa835fbd7b43c0d4dea4556updated subject URI in initial exampleeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md5f82b3b73aafccd9089aeb3e9da6f39f48d3abce1551917854000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comchanged eml/annotations example 2019-03-06 16:17:34 -08005f82b3b73aafccd9089aeb3e9da6f39f48d3abcechanged eml/annotations exampleeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md4d4d76a1a64eb3f8ee9551c7acc0d34181bacc6b1551920272000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadded comments to intro Addressing Margaret's note about whether to separate RDF/semantic annotation intro from rest of document. I've added sentence to recommend those already understanding basics of Semantic WEb to skip directly to section on how to embed annotations in EML. 2019-03-06 16:57:52 -08004d4d76a1a64eb3f8ee9551c7acc0d34181bacc6badded comments to introeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md6a24af550880c5b2aed4e30da1a1d807b36048c81551925115000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comminor order change 2019-03-06 18:18:35 -08006a24af550880c5b2aed4e30da1a1d807b36048c8minor order changeeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mda22100b7012604f1b4fcca101e810643465dffa61551925156000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd parens 2019-03-06 18:19:16 -0800a22100b7012604f1b4fcca101e810643465dffa6add parenseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md5a06c17b8f63921e386d290a710702621c048e581551938199000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comintroduced resource/property/value terms in intro ...since this was our choice for labelling components of triple in the EML annotation syntax... 2019-03-06 21:56:39 -08005a06c17b8f63921e386d290a710702621c048e58introduced resource/property/value terms in introeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md84c9683dd31c2f8e5ecbc261f41c8df09bfb1a761551938673000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadded terse note about JSON-LD vis-a-vis RDF lots of people seem confused about this and don't know that JSON-LD is generalized RDF 2019-03-06 22:04:33 -080084c9683dd31c2f8e5ecbc261f41c8df09bfb1a76added terse note about JSON-LD vis-a-vis RDFeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdf579ab49d6a8b728053ec6e9e3ded66ab5bc1f061552421785000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comchanged Example 4 2019-03-12 13:16:25 -0700f579ab49d6a8b728053ec6e9e3ded66ab5bc1f06changed Example 4editdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md1c6b5bb011bb516653199092f917420de1c593231552422929000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comchanged Examples 1 and 2, fixed typos 2019-03-12 13:35:29 -07001c6b5bb011bb516653199092f917420de1c59323changed Examples 1 and 2, fixed typoseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md5de6ca6abdb27c54b41cd9978e87a6c5c7a615861552423552000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit Logical Consistency section made edits according to Bryce's feedback (mostly) 2019-03-12 13:45:52 -07005de6ca6abdb27c54b41cd9978e87a6c5c7a61586edit Logical Consistency sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdab96e6b419e88f3b5a15286bd16d31d52012dce51552429515000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit RDF graphs section 2019-03-12 15:25:15 -0700ab96e6b419e88f3b5a15286bd16d31d52012dce5edit RDF graphs sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md1d18e570c927c2189ebeecfd875aae84fa3131661552430381000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit RDF graphs section 2019-03-12 15:39:41 -07001d18e570c927c2189ebeecfd875aae84fa313166edit RDF graphs sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mda0ab302502547d4e2ff7a07288f36d542671555a1552498109000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfixed typos 2019-03-13 10:28:29 -0700a0ab302502547d4e2ff7a07288f36d542671555afixed typoseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdc79668d001efac3a17b09b834b68f7c4d422e1841552501683000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comremoved table mapping triple to EML Removed the table that mapped each triple component to their EML analog. Don't think it added much more than what is already stated in the text. 2019-03-13 11:28:03 -0700c79668d001efac3a17b09b834b68f7c4d422e184removed table mapping triple to EMLeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mddb7c8d6ba37d0a4af3d8eefed132f97cd717467e1552502825000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comminor edits to the intro 2019-03-13 11:47:05 -0700db7c8d6ba37d0a4af3d8eefed132f97cd717467eminor edits to the introeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md1fadecbfc000c97e183a12f01a2d5d1ea710585a1552510065000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comminor edits 2019-03-13 13:47:45 -07001fadecbfc000c97e183a12f01a2d5d1ea710585aminor editseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md14c45c59ed83a3a6448d9bcf7b1837d4cbd6af9e1553044199000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comshortened intro 2019-03-19 18:09:59 -070014c45c59ed83a3a6448d9bcf7b1837d4cbd6af9eshortened introeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md6dfbe4d3e7ecb4e5f038f46106c0a0dd352dfe8f1553044803000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comminor changes still working on it 2019-03-19 18:20:03 -07006dfbe4d3e7ecb4e5f038f46106c0a0dd352dfe8fminor changeseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdfce95009d12d4c764d9f8500b35e53b9da5bd2291553127456000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.commark's edit Have placed a bunch of side-notes in SLACK for Steven and Margaret perusal 2019-03-20 17:17:36 -0700fce95009d12d4c764d9f8500b35e53b9da5bd229mark's editeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md887c7a8749525cad2c7253fb1d2fc5312192561d1553184000000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadded small explanation about OWL 2019-03-21 09:00:00 -0700887c7a8749525cad2c7253fb1d2fc5312192561dadded small explanation about OWLeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md4cb3eb93d098489322055a1fb4f75eb342ff1da21553201471000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comtesting a footnote 2019-03-21 13:51:11 -07004cb3eb93d098489322055a1fb4f75eb342ff1da2testing a footnoteeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md27c36a1404435eec1a6d2e657a91732b5f43470c1553201878000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfootnote, maybe 2019-03-21 13:57:58 -070027c36a1404435eec1a6d2e657a91732b5f43470cfootnote, maybeeditdocs/eml-semantic-annotations-primer.mddocs/eml-faq.md9972508f20446ada90b79dc2103c5589a28972541554319280000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduadded a group of questions to the FAQ. all pertain to the semantics primer 2019-04-03 15:21:20 -04009972508f20446ada90b79dc2103c5589a2897254added a group of questions to the FAQ. all pertain to the semanticseditdocs/eml-faq.mdsrc/test/resources/eml-simple.xmlREADME.mdb695b0362801b2ed387c455a89831e5a458740ed1554528530000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate README. Fixes URLs in the list, adds ORCID to the simple example, changes the developmet section to reflect new practices, adds detail in the history section, and updates the fuding section. Add a XML doc that ensures the README example validates. 2019-04-05 22:28:50 -0700b695b0362801b2ed387c455a89831e5a458740edUpdate README.addsrc/test/resources/eml-simple.xmleditREADME.mdsrc/test/resources/eml-simple.xmlREADME.mda0150a1cc9f7c7080f562e488f10da26b296b1571554751601000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix validation error due to duplicate id. 2019-04-08 12:26:41 -0700a0150a1cc9f7c7080f562e488f10da26b296b157Fix validation error due to duplicate id.editsrc/test/resources/eml-simple.xmleditREADME.mdsrc/main/java/org/ecoinformatics/datamanager/parser/DataPackage.java2c674983242d8111561c7e723b803483f7184d791558027987000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduAdd the class fields language, abstract and keywords. 2019-05-16 10:33:07 -07002c674983242d8111561c7e723b803483f7184d79Add the class fields language, abstract and keywords.editsrc/main/java/org/ecoinformatics/datamanager/parser/DataPackage.javasrc/main/java/org/ecoinformatics/datamanager/parser/generic/GenericDataPackageParser.java572441feea47d97e7c1e6e6f4ad478aa237374d21558033236000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduAdd the code to parse and store keywords, abstract and language. 2019-05-16 12:00:36 -0700572441feea47d97e7c1e6e6f4ad478aa237374d2Add the code to parse and store keywords, abstract and language.editsrc/main/java/org/ecoinformatics/datamanager/parser/generic/GenericDataPackageParser.javasrc/test/java/org/ecoinformatics/datamanager/parser/generic/Eml200DataPackageParserTest.java0b6ef3bd69fdc3a0ecfe2a0fcda5cff47edbfc2e1558042426000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduAdd test code for new fields. 2019-05-16 14:33:46 -07000b6ef3bd69fdc3a0ecfe2a0fcda5cff47edbfc2eAdd test code for new fields.editsrc/test/java/org/ecoinformatics/datamanager/parser/generic/Eml200DataPackageParserTest.javapom.xmla1bf8f53905113bc0f4fca26f9f9ca7543c308441558043513000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduBump the version to 0.9.1 2019-05-16 14:51:53 -0700a1bf8f53905113bc0f4fca26f9f9ca7543c30844Bump the version to 0.9.1editpom.xmlsrc/main/java/org/ecoinformatics/datamanager/parser/Party.javasrc/main/java/org/ecoinformatics/datamanager/parser/generic/GenericDataPackageParser.javasrc/main/java/org/ecoinformatics/datamanager/parser/UserId.javab706d7d41c6c66553a7bbabe8cbfc75a130efd571558385502000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduAdd the code to parse the userId in the party element. 2019-05-20 13:51:42 -0700b706d7d41c6c66553a7bbabe8cbfc75a130efd57Add the code to parse the userId in the party element.editsrc/main/java/org/ecoinformatics/datamanager/parser/generic/GenericDataPackageParser.javaeditsrc/main/java/org/ecoinformatics/datamanager/parser/Party.javaaddsrc/main/java/org/ecoinformatics/datamanager/parser/UserId.javasrc/main/java/org/ecoinformatics/datamanager/parser/Party.javasrc/main/java/org/ecoinformatics/datamanager/parser/generic/GenericDataPackageParser.javasrc/main/java/org/ecoinformatics/datamanager/parser/DataPackage.java3a5bb4f677f3ef907f29136b93c12c20063183991559172039000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduAdd the publisher and pubDate to the parser. 2019-05-29 16:20:39 -07003a5bb4f677f3ef907f29136b93c12c2006318399Add the publisher and pubDate to the parser.editsrc/main/java/org/ecoinformatics/datamanager/parser/generic/GenericDataPackageParser.javaeditsrc/main/java/org/ecoinformatics/datamanager/parser/Party.javaeditsrc/main/java/org/ecoinformatics/datamanager/parser/DataPackage.javapom.xml08dc124c198de8b7cec03a5fe359d0afed65876b1559172562000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduBump the version to 0.9.2. 2019-05-29 16:29:22 -070008dc124c198de8b7cec03a5fe359d0afed65876bBump the version to 0.9.2.editpom.xmlsrc/main/java/org/ecoinformatics/datamanager/parser/generic/GenericDataPackageParser.javasrc/main/java/org/ecoinformatics/datamanager/parser/DataPackage.java8d8d35cfc35b385fb938f2f11200f84a06112b511559581798000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduFixed a typo on the word "abstract". The abstract is a keyword on the java code, somehow the editor auto changed the word. 2019-06-03 10:09:58 -07008d8d35cfc35b385fb938f2f11200f84a06112b51Fixed a typo on the word "abstract". The abstract is a keyword on theeditsrc/main/java/org/ecoinformatics/datamanager/parser/generic/GenericDataPackageParser.javaeditsrc/main/java/org/ecoinformatics/datamanager/parser/DataPackage.javadocs/eml-semantic-annotations-primer.md0dc25cdbb87737529345cdf41b2daaba87d4c5181559763996000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edureorganized major sections. TO DO: links from text to appendix 2019-06-05 12:46:36 -07000dc25cdbb87737529345cdf41b2daaba87d4c518reorganized major sections. TO DO: links from text to appendixeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md9e8e502c804f374d6a1a0dcb4a280861e383eb251559766755000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.commoved asterisks in links 2019-06-05 13:32:35 -07009e8e502c804f374d6a1a0dcb4a280861e383eb25moved asterisks in linkseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md93484da1e1e1890434f137b8662b1fae543f3fc81559767474000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.commoved anchor tags to above heading 2019-06-05 13:44:34 -070093484da1e1e1890434f137b8662b1fae543f3fc8moved anchor tags to above headingeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md97e1ab18fc90b59f8ef20ea3d378aa2e4ec4a9831559767714000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.commoved from some more anchor tags. 2019-06-05 13:48:34 -070097e1ab18fc90b59f8ef20ea3d378aa2e4ec4a983moved from some more anchor tags.editdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdd168e1116e01ce8f23cfaf886e2093b56298ad5e1559768701000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comcross-links between examples and their rdf graph 2019-06-05 14:05:01 -0700d168e1116e01ce8f23cfaf886e2093b56298ad5ecross-links between examples and their rdf grapheditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdb543d50fcda1d4a880b04417bc047ab58de927ae1559768898000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.commore cross refs can't seem to test these in O2! 2019-06-05 14:08:18 -0700b543d50fcda1d4a880b04417bc047ab58de927aemore cross refseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mda16438c3be477c684018cac0631be8ae69c264b81559769046000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.commoved rdf for example 3 to the correct place. 2019-06-05 14:10:46 -0700a16438c3be477c684018cac0631be8ae69c264b8moved rdf for example 3 to the correct place.editdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md8b5be8b7b7ffe3040d8a69b4700cc9f17a2e9d821559769172000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comextra asterisk removed 2019-06-05 14:12:52 -07008b5be8b7b7ffe3040d8a69b4700cc9f17a2e9d82extra asterisk removededitdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md7960ff60d156633b2def81c4a431abd4609738671559769254000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comgraph for example 3 lowered in hierarchy to match example 4 graph 2019-06-05 14:14:14 -07007960ff60d156633b2def81c4a431abd460973867graph for example 3 lowered in hierarchyeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md0e7b1361e878328cb91a222d6f4e4f8061c2a3161559769547000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.coma few leading spaces removed. 2019-06-05 14:19:07 -07000e7b1361e878328cb91a222d6f4e4f8061c2a316a few leading spaces removed.editdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mde84580646d7c0f38fc77328f5ddfecbee0aa995e1559769675000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.combroke organization para 2019-06-05 14:21:15 -0700e84580646d7c0f38fc77328f5ddfecbee0aa995ebroke organization paraeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md466d1b92efa09d4f215c9d0fbb7a7e70b509fe6d1559769785000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comremoved subheaders in intro 2019-06-05 14:23:05 -0700466d1b92efa09d4f215c9d0fbb7a7e70b509fe6dremoved subheaders in introeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md338e8182ef3615d957c30580fa02dd051a052a291559769927000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd to organization para describe EML elements as code blocks. 2019-06-05 14:25:27 -0700338e8182ef3615d957c30580fa02dd051a052a29add to organization paraeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md9613a789c396e92041c1ea3b2b070f24b0be1dc71559769981000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comdeleted extra glossary ref 2019-06-05 14:26:21 -07009613a789c396e92041c1ea3b2b070f24b0be1dc7deleted extra glossary refeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md902fcd2448dedf701974d4248bf5c69884a4dc721559776195000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comlinks to example rdf in logical consistency sect. 2019-06-05 16:09:55 -0700902fcd2448dedf701974d4248bf5c69884a4dc72links to example rdf in logical consistency sect.editdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdf3a05384216c999d3078220064f51ad27a8510811559776447000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comchecking for logical consistency section a few more words, to be clearer. 2019-06-05 16:14:07 -0700f3a05384216c999d3078220064f51ad27a851081checking for logical consistency sectioneditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md0f25475542c4f307acd8a8e80336467f9145812a1559776815000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comturned simplest triple into a code block 2019-06-05 16:20:15 -07000f25475542c4f307acd8a8e80336467f9145812aturned simplest triple into a code blockeditdocs/eml-semantic-annotations-primer.mdREADME.mdc115e8c975a8188196ea2411971a3fdd0f7d440e1561426853000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix typos in README. 2019-06-24 17:40:53 -0800c115e8c975a8188196ea2411971a3fdd0f7d440eFix typos in README.editREADME.mddocs/eml-faq.md85a789d312ba6bef513eb2456ff783f660bc504e1561751683000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadded Q:A answers about what is: "dereferencing", URI vs URL, and SKOS 2019-06-28 12:54:43 -070085a789d312ba6bef513eb2456ff783f660bc504eadded Q:A answers about what is: "dereferencing", URI vs URL, and SKOSeditdocs/eml-faq.mddocs/eml-faq.md53287f2aa1e44b2fcbe7ce81580361ebddbfd4811561762639000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comAnswered Q:A section about SKOS, RDFS, and an example using rdfs:label Still working on good example of an RDF graph... 2019-06-28 15:57:19 -070053287f2aa1e44b2fcbe7ce81580361ebddbfd481Answered Q:A section about SKOS, RDFS, and an example using rdfs:labeleditdocs/eml-faq.mddocs/eml-faq.md2f882bcf0f16f3d9c5d7009661a3a1af97cd41e61562116368000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comanswered questions about interpreting an RDF Graph, and if tools are available to help semantically annotate 2019-07-02 18:12:48 -07002f882bcf0f16f3d9c5d7009661a3a1af97cd41e6answered questions about interpreting an RDF Graph, and if tools areeditdocs/eml-faq.mddocs/eml-faq.mdeed752f3a977321a6d3729b6b58a62de0f1803a51562176370000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfine-tuned text on answer to "what does the RDF look like?" 2019-07-03 10:52:50 -0700eed752f3a977321a6d3729b6b58a62de0f1803a5fine-tuned text on answer to "what does the RDF look like?"editdocs/eml-faq.mddocs/eml-faq.md04c52274b749b49ecfea1ad16829dcc0cd7bb99d1562177134000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comsmall grammatical fix 2019-07-03 11:05:34 -070004c52274b749b49ecfea1ad16829dcc0cd7bb99dsmall grammatical fixeditdocs/eml-faq.mddocs/eml-semantic-annotations-primer.md590cf5774aae9a7d6197cac59156fdf8a7e8a1401562222382000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comremoved extra newline and parentheses in intro 2019-07-03 23:39:42 -0700590cf5774aae9a7d6197cac59156fdf8a7e8a140removed extra newline and parentheses in introeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md4f384205d6e05f70c62a97856d8f1a9619c1d6431562369917000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadded comments Added 3 suggestions. These have been placed inside brackets and have "SC" at the beginning (e.g. [SC: ... ]) 2019-07-05 16:38:37 -07004f384205d6e05f70c62a97856d8f1a9619c1d643added commentseditdocs/eml-semantic-annotations-primer.mddocs/eml-faq.mdb7ca87288c43123965d57d1c2423bebaf9fd13171562396172000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadded comment and fixed misspelling Added a comment about defining acronyms, in brackets with my initials (i.e. [SC: ...] ). Also fixed a misspelling 2019-07-05 23:56:12 -0700b7ca87288c43123965d57d1c2423bebaf9fd1317added comment and fixed misspellingeditdocs/eml-faq.mddocs/eml-faq.mdd0d35c8a73110f965910e1da9c038e7d8a3f25e61562623169000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comexpanded acronyms Expanded the first usages of IETF and RFC. 2019-07-08 14:59:29 -0700d0d35c8a73110f965910e1da9c038e7d8a3f25e6expanded acronymseditdocs/eml-faq.mddocs/eml-faq.mdc1a8215332948e74b3b4e938507e7a59a54f0fbc1562874141000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdated faq to use a schema.org "predicate" 2019-07-11 12:42:21 -0700c1a8215332948e74b3b4e938507e7a59a54f0fbcupdated faq to use a schema.org "predicate"editdocs/eml-faq.mdxsd/eml-resource.xsd315726bffefd5a76a4147973f817d64ebf93ea7e1562890523000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgClarify use of resource titles and translations Fixes #336 2019-07-11 16:15:23 -0800315726bffefd5a76a4147973f817d64ebf93ea7eClarify use of resource titles and translationseditxsd/eml-resource.xsdxsd/eml-semantics.xsdsrc/test/resources/eml-with-annotations-with-ids.xml09ffc6b04b01fc8f2b707ce17ebe0b0196ecf1231562892137000http://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishpetridish@gmail.comAdd support for id, system, and scope attribute on annotation elements Resolves #335 2019-07-11 16:42:17 -080009ffc6b04b01fc8f2b707ce17ebe0b0196ecf123Add support for id, system, and scope attribute on annotation elementseditxsd/eml-semantics.xsdaddsrc/test/resources/eml-with-annotations-with-ids.xmldocs/eml-faq.md7c766034319285f7def2bd8325ed75435b85c73f1563212401000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comsmall addition to dereferencing text 2019-07-15 10:40:01 -07007c766034319285f7def2bd8325ed75435b85c73fsmall addition to dereferencing texteditdocs/eml-faq.mddocs/eml-faq.md28a9f2980086442880d1d11312323c0c075ac6d11563212518000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comsmall rewording about diff among URI/URL/URN 2019-07-15 10:41:58 -070028a9f2980086442880d1d11312323c0c075ac6d1small rewording about diff among URI/URL/URNeditdocs/eml-faq.mddocs/eml-faq.md84335d8f920bc2146c246069995a3fb50c688b0a1563491248000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.coma few more minor grammatical edits 2019-07-18 16:07:28 -070084335d8f920bc2146c246069995a3fb50c688b0aa few more minor grammatical editseditdocs/eml-faq.mddocs/eml-contributors.md5983a1bbed454296befe92f27e469cb4112af2861564037289000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate contributors list Following up on #309, I added myself and a placeholder for @srearl 2019-07-24 23:48:09 -07005983a1bbed454296befe92f27e469cb4112af286update contributors listeditdocs/eml-contributors.mdREADME.md8991dc35a5e61e45ee92560033920ecba82573161564037760000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate citation Added Steven Chong to the citation. 2019-07-24 23:56:00 -07008991dc35a5e61e45ee92560033920ecba8257316update citationeditREADME.mddocs/eml-semantic-annotations-primer.md33384b48b3278eaf3e71bebf90fbd70badf01c3d1564077061000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadded simpler para 1; blended in para 2 2019-07-25 10:51:01 -070033384b48b3278eaf3e71bebf90fbd70badf01c3dadded simpler para 1; blended in para 2editdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md978ef99abb7d00c25acbfd27b18b6d213919b24c1564083473000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduUpdate eml-semantic-annotations-primer.md address https://github.com/NCEAS/eml/issues/340#issuecomment-515168433 items 1, 3, placeholders for glossary entries (item 6) 2019-07-25 12:37:53 -0700978ef99abb7d00c25acbfd27b18b6d213919b24cUpdate eml-semantic-annotations-primer.mdeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mddd152a1720545b5233cd5d466e96d06e7f1963d71564084404000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduUpdate eml-semantic-annotations-primer.md typos, section header syntax. 2019-07-25 12:53:24 -0700dd152a1720545b5233cd5d466e96d06e7f1963d7Update eml-semantic-annotations-primer.mdeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdea64fd6eecb952ef48f704c4ff072e63950b9cbf1564091793000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduUpdate eml-semantic-annotations-primer.md simplified introduction further. no arcane terms till paragraph 4. woo hoo 2019-07-25 14:56:33 -0700ea64fd6eecb952ef48f704c4ff072e63950b9cbfUpdate eml-semantic-annotations-primer.mdeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md01d352ed07c7a8c17012f02d146ba2794fd2ddd61564093254000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix whitespace problems with markdown headings in semantics primer. 2019-07-25 14:20:54 -080001d352ed07c7a8c17012f02d146ba2794fd2ddd6Fix whitespace problems with markdown headings in semantics primer.editdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md1ef70690115244a304360512172bea9e57e5d2331564102973000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edutask 5 done. started on 4 (example text) 2019-07-25 18:02:53 -07001ef70690115244a304360512172bea9e57e5d233task 5 done. started on 4 (example text)editdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdf7337403dd5fa810173cd94023719c803afd65b61564103387000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edufew typos and whitespace 2019-07-25 18:09:47 -0700f7337403dd5fa810173cd94023719c803afd65b6few typos and whitespaceeditdocs/eml-semantic-annotations-primer.mddocs/eml-contributors.mdcc1b085689598be0eedc758508caa58459dd96c01564178473000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orground out contact info for searl 2019-07-26 14:01:13 -0800cc1b085689598be0eedc758508caa58459dd96c0round out contact info for searleditdocs/eml-contributors.md.gitignore0644cf2602f2f962e2d34b5ef060345fa38a5ac91564439831000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgIgnore project config files in git. 2019-07-29 14:37:11 -08000644cf2602f2f962e2d34b5ef060345fa38a5ac9Ignore project config files in git.edit.gitignorexsd/eml-entity.xsdsrc/test/resources/moduleEML/eml-access.xmlxsd/eml-spatialVector.xsdsrc/test/resources/moduleEML/eml-method.xmlsrc/test/resources/eml-datasetWithAccess.xmlsrc/test/resources/invalidEML/eml-error4.xmlsrc/test/resources/citation-sbclter-bibliography.231.xmlxsd/eml-physical.xsdsrc/test/resources/moduleEML/eml-protocol.xmldocs/eml-validation-refs.mdsrc/test/resources/eml-datasetGringpoint.xmlsrc/test/resources/moduleEML/eml-dataTable.xmlsrc/test/resources/citation-sbclter-bibliography.50.xmlsrc/test/resources/eml-citationWithContact.xmlsrc/test/resources/moduleEML/eml-text.xmlsrc/test/resources/moduleEML/eml-2.1.1-all-units.xmlxsd/eml-literature.xsdxsd/eml-dataTable.xsdsrc/test/resources/eml-softwareWithAcessDistribution.xmlsrc/test/resources/eml-software-dependency.xmlsrc/test/resources/eml-citationWithContactReference.xmlsrc/test/resources/eml-with-annotations-with-ids.xmlsrc/test/resources/moduleEML/eml-software.xmlsrc/test/resources/citation-sbclter-bibliography.233.xmlsrc/test/resources/citation-sbclter-bibliography.289.xmlsrc/test/resources/citation-sbclter-bibliography.280.xmlxsd/eml-documentation.xsdxsd/eml-view.xsdsrc/test/resources/moduleEML/eml-party.xmlxsd/eml-dataset.xsdsrc/test/resources/moduleEML/eml-view.xmlsrc/test/resources/citation-sbclter-bibliography.279.xmlsrc/test/resources/invalidEML/eml-error-references.xmlsrc/test/resources/citation-sbclter-bibliography.201.xmlsrc/test/resources/moduleEML/eml-physical.xmlsrc/test/resources/citation-sbclter-bibliography.296.xmlxsd/eml-project.xsdsrc/test/resources/eml-datasetWithNonwordCharacters.xmlxsd/eml-constraint.xsdsrc/test/resources/eml-datasetWhitespacePatterns.xmllib/eml.jarsrc/test/resources/moduleEML/eml-literatureInPress.xmlsrc/test/resources/citation-sbclter-bibliography.285.xmlsrc/test/resources/invalidEML/eml-error-annot-ref-missing.xmlsrc/test/resources/eml-data-paper.xmlstyle/eml/eml.xslsrc/test/resources/citation-sbclter-bibliography.51.xmlxsd/eml-semantics.xsdxsd/eml-coverage.xsdsrc/test/resources/eml-datasetWithAccessUnitsLiteralLayout.xmlsrc/test/resources/eml-datasetMultipleDistribution.xmlxsd/eml.xsdxsd/eml-methods.xsdxsd/eml-software.xsddocs/eml-internationalization.mdsrc/test/resources/eml-datasetWithCitation.xmlsrc/test/resources/eml-i18n.xmlsrc/test/resources/moduleEML/eml-physical-inline.xmlsrc/test/resources/moduleEML/eml-literature.xmlsrc/test/resources/eml.xmlsrc/test/resources/moduleEML/eml-spatialVector.xmlsrc/test/resources/invalidEML/eml-error-annot-missing-id.xmlxsd/eml-attribute.xsdxsd/eml-spatialRaster.xsdsrc/test/resources/moduleEML/eml-offline.xmlsrc/test/resources/eml-datasetWithAttributelevelMethods.xmlxsd/eml-unitTypeDefinitions.xsdsrc/test/resources/eml-sample.xmlxsd/eml-access.xsdstyle/eml211to220.xslREADME.mdsrc/test/resources/eml-datasetWithUnits.xmlsrc/test/resources/invalidEML/eml-error3.xmlsrc/test/resources/eml-datasetGRing.xmlsrc/test/resources/citation-sbclter-bibliography.232.xmlsrc/test/resources/moduleEML/eml-project.xmlsrc/test/resources/citation-sbclter-bibliography.202.xmlsrc/test/resources/moduleEML/eml-entity.xmlxsd/eml-text.xsdxsd/eml-spatialReference.xsdsrc/test/resources/moduleEML/eml-inline.xmlxsd/eml-protocol.xsdxsd/eml-storedProcedure.xsdsrc/test/resources/citation-sbclter-bibliography.203.xmlsrc/test/resources/invalidEML/eml-error1.xmlsrc/test/resources/moduleEML/eml-semantics.xmlsrc/test/resources/moduleEML/eml-attribute.xmlsrc/test/resources/eml-datasetWithAccessOverride.xmlsrc/test/resources/moduleEML/eml-dataset.xmlsrc/test/resources/moduleEML/eml-physical-inline-cdatasection.xmlxsd/eml-resource.xsdsrc/test/resources/eml-simple.xmlsrc/test/resources/citation-sbclter-bibliography.211.xmlsrc/test/resources/moduleEML/eml-storedProcedure.xmlsrc/test/resources/citation-sbclter-bibliography.297.xmlxsd/eml-party.xsdsrc/test/resources/citation-sbclter-bibliography.284.xmlb1b77f755b9e014bd437e21c6f2fff5085bbbb631564443759000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate EML schemas to use new https-based namespace. The new namespace is of the form `https://eml.ecoinformatics.org/eml-2.2.0`. XSD files, stylesheets, and test documents were updated. Work related to issue #341. 2019-07-29 15:42:39 -0800b1b77f755b9e014bd437e21c6f2fff5085bbbb63Update EML schemas to use new https-based 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Oxygen docs to book and tweak the book build I built the Oxygen docs with our build script and commit them here and also integrate them into the Bookdown book with a custom build script. The new build script does two things: 1. Renames the HTML output of ../README.md which we want to use as the index.html of the book. A custom build script has to do this because Bookdown tries to use the top level header of the file as the filename but we want to use index.html so the book works nicely. 2. Copies in the Oxygen docs into the build book 2019-07-29 21:08:03 -0800808fb1f96ac1d7c4dd9bde8d8b4a6be3f87f4af4Add Oxygen docs to book and tweak the book 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an issue with my approach to making index.html Bookdown still wants to use the README.md title so I did copy rather than a rename so both HTML files exist. 2019-07-29 21:23:24 -080033d7f6b10d73f3c9eafd79429f854c1394716f4eFix an issue with my approach to making index.htmleditdocs/build_book.Rdocs/eml-semantic-annotations-primer.md4748836b11f2bdb0e6117a9be8500c277944b2151564507346000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edurestructured text for examples 2 and 3 2019-07-30 10:22:26 -07004748836b11f2bdb0e6117a9be8500c277944b215restructured text for examples 2 and 3editdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdbb59916052818ead5eef0e39c714a77b4dcb66f51564509421000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edurestructured text for examples 4 and 5 2019-07-30 10:57:01 -0700bb59916052818ead5eef0e39c714a77b4dcb66f5restructured text for examples 4 and 5editdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md2af2458159335258952a9b21479ad6e6555ef30f1564511029000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduentry for each of 8 vocabs in the examples. 2019-07-30 11:23:49 -07002af2458159335258952a9b21479ad6e6555ef30fentry for each of 8 vocabs in the examples.editdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mda539b5885d7a9fe5f57e5649fc79129d74bf6b8c1564512988000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfix typos and links 2019-07-30 11:56:28 -0700a539b5885d7a9fe5f57e5649fc79129d74bf6b8cfix typos and linkseditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.md4e39f575910d7be25a9d31958a4979b7c6e27d021564513929000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit intro 2019-07-30 12:12:09 -07004e39f575910d7be25a9d31958a4979b7c6e27d02edit introeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotations-primer.mdada99fc0711297bb62fd74dd26cc6dfea4f9cf6c1564514211000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfix links in intro 2019-07-30 12:16:51 -0700ada99fc0711297bb62fd74dd26cc6dfea4f9cf6cfix links in introeditdocs/eml-semantic-annotations-primer.mddocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotations-primer.md28d010f21f5328acf9ccfbf0f6d8e83aeeb82a221564514306000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit file name Changed the file name so it is consistent with the title 2019-07-30 12:18:26 -070028d010f21f5328acf9ccfbf0f6d8e83aeeb82a22edit file namedeletedocs/eml-semantic-annotations-primer.mdadddocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md59573e094ec2f0d553b607b7dc6ff0e6fa2c59e21564514760000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit 'Organization of this document' section Fixed links and typos 2019-07-30 12:26:00 -070059573e094ec2f0d553b607b7dc6ff0e6fa2c59e2edit 'Organization of this document' sectioneditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mddc1468bb44c2494b9b3fd5b55611c303e40ab73f1564515254000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit Semantic Annotations in EML 2.2.0 section 2019-07-30 12:34:14 -0700dc1468bb44c2494b9b3fd5b55611c303e40ab73fedit Semantic Annotations in EML 2.2.0 sectioneditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mda37b637416060ca6c2a921d7e06871eaafa9e3591564515531000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit top-level resource section 2019-07-30 12:38:51 -0700a37b637416060ca6c2a921d7e06871eaafa9e359edit top-level resource sectioneditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdbdd5e51f7a784721b1f6151eea8274d25f26cd2f1564515889000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit example 3 2019-07-30 12:44:49 -0700bdd5e51f7a784721b1f6151eea8274d25f26cd2fedit example 3editdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md908cb0f00a1581bae6d88188a6f06b434ccc9ed01564516778000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit example 4 2019-07-30 12:59:38 -0700908cb0f00a1581bae6d88188a6f06b434ccc9ed0edit example 4editdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md5bc6e953ab9719798082a8d0bd273563611c32fc1564517238000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit example 5 2019-07-30 13:07:18 -07005bc6e953ab9719798082a8d0bd273563611c32fcedit example 5editdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md12340eada97f0c3deffa9f427841e55e094bef271564518122000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit "semantic triples" and "URIs" section 2019-07-30 13:22:02 -070012340eada97f0c3deffa9f427841e55e094bef27edit "semantic triples" and "URIs" sectioneditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdb7f66ab925ea7d0506a74cf5ecd9e1be1dd2bd5f1564518652000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit URIs and RDF Graphs sections 2019-07-30 13:30:52 -0700b7f66ab925ea7d0506a74cf5ecd9e1be1dd2bd5fedit URIs and RDF Graphs sectionseditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdc1c9fade2aa7f96e71818aaa610c9dea8de3a3771564519119000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comput glossary terms in alphabetical order 2019-07-30 13:38:39 -0700c1c9fade2aa7f96e71818aaa610c9dea8de3a377put glossary terms in alphabetical ordereditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md6ba004469ce2f2def6881d54fef1ba728c3620c21564519466000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit glossary and example vocabs 2019-07-30 13:44:26 -07006ba004469ce2f2def6881d54fef1ba728c3620c2edit glossary and example vocabseditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdc39137a07d7b6510f88d93dda15b35c08f9f9d561564520252000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit example vocabs 2019-07-30 13:57:32 -0700c39137a07d7b6510f88d93dda15b35c08f9f9d56edit example vocabseditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md9dcaee12907dccd961451e6e2ba8f6dd5671ee261564524056000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd the FAQs from eml-faq Copied and pasted the FAQ here because the info about semantics didn't really apply to EML. 2019-07-30 15:00:56 -07009dcaee12907dccd961451e6e2ba8f6dd5671ee26add the FAQs from eml-faqeditdocs/eml-semantic-annotation-primer.mddocs/eml-faq.mdc40bb61dac0e7216419fa6ab5784ca5f3f8096af1564524261000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comremove semantics content Removed the Q's relating to semantics because they were outside the scope of this FAQ. The Q's and A's have been transferred to the semantic annotation primer. 2019-07-30 15:04:21 -0700c40bb61dac0e7216419fa6ab5784ca5f3f8096afremove semantics contenteditdocs/eml-faq.mddocs/eml-semantic-annotation-primer.md24e3cda950131573f74ba50e06961f21b35bee231564524659000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfix Q's format and wording Made Q's bold and changed the wording so they are in the form of questions. 2019-07-30 15:10:59 -070024e3cda950131573f74ba50e06961f21b35bee23fix Q's format and wordingeditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md20ed38b769efee5480765000d47316e3eaf9a6e81564525195000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit FAQ, add link to FAQ 2019-07-30 15:19:55 -070020ed38b769efee5480765000d47316e3eaf9a6e8edit FAQ, add link to FAQeditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md4bc49a99451b9e867c084d10441908224d6ab52f1564525660000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit FAQ 2019-07-30 15:27:40 -07004bc49a99451b9e867c084d10441908224d6ab52fedit FAQeditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md3af0cd035e4966a9aead7d2bc364ebd1fb62fe961564527303000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd FAQ to doc organization; add vocab info 2019-07-30 15:55:03 -07003af0cd035e4966a9aead7d2bc364ebd1fb62fe96add FAQ to doc organization; add vocab infoeditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdb853dd463cd7a49c021e68051effcbee6c8215ed1564530915000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comadd definition of glossary terms 2019-07-30 16:55:15 -0700b853dd463cd7a49c021e68051effcbee6c8215edadd definition of glossary termseditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdbb38ee013c7e308a177751503d601a6d1f6e10221564531881000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comUpdate eml-semantic-annotation-primer.md split two FAQs into multiple paras. added a note about DC 2019-07-30 17:11:21 -0700bb38ee013c7e308a177751503d601a6d1f6e1022Update eml-semantic-annotation-primer.mdeditdocs/eml-semantic-annotation-primer.mddocs/_bookdown.yml8a12538b077da9025ae7267c72aabdfa3db683fe1564532015000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate semantic annotation primer file name Changed the file name to match the title 2019-07-30 17:13:35 -07008a12538b077da9025ae7267c72aabdfa3db683feupdate semantic annotation primer file nameeditdocs/_bookdown.ymldocs/eml-semantic-annotation-primer.md9ec92d160879de63df635c147698a3bc49ffff481564592163000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate document organization section; fix typos Removed the letters and roman numerals from the doc organization section; fixed typos in the FAQ and external vocab section 2019-07-31 09:56:03 -07009ec92d160879de63df635c147698a3bc49ffff48update document organization section; fix typoseditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md8054b9916a9e5237b6122af4afb0c11ff0789f761564607519000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edulinked text to FAQs. added one more FAQ (re measurements). added definition for "knowledge graph" 2019-07-31 14:11:59 -07008054b9916a9e5237b6122af4afb0c11ff0789f76linked text to FAQs. added one more FAQ (re measurements). addededitdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md63aa5b6627e0355363da1c7579317e0e1b3d20a01564609338000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedit URIs section 2019-07-31 14:42:18 -070063aa5b6627e0355363da1c7579317e0e1b3d20a0edit URIs sectioneditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md501a466b7640e2f18b6f143b24ba7d30e9f46cf61564706840000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comproofing and small revisions-- still working on this. 2019-08-01 17:47:20 -0700501a466b7640e2f18b6f143b24ba7d30e9f46cf6proofing and small revisions-- still working on this.editdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdd9b88f41e3e05ddb924bef751b79ea194a0f34311564764888000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comcontinuing with revisions to Sem Primer I've made some changes so when I'm through (hopefully today) will need Margaret and Steven to re-read and discuss before passing on for more extended review/commentary 2019-08-02 09:54:48 -0700d9b88f41e3e05ddb924bef751b79ea194a0f3431continuing with revisions to Sem Primereditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdda324976b116c7f337de1a034f66782f1fa4f2e51564789471000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comsaving changes thru line 100 i lost a bunch of edits earlier today because I did not commit my changes, so will save intermittently to prevent such loss again. 2019-08-02 16:44:31 -0700da324976b116c7f337de1a034f66782f1fa4f2e5saving changes thru line 100editdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdcbd2be8ae3c823c9da4c074fa447838423665a531564790372000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedits up to line 200 committing to avoid losing edits 2019-08-02 16:59:32 -0700cbd2be8ae3c823c9da4c074fa447838423665a53edits up to line 200editdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md39341e860912b2cb3c96b415a38c9b387b1357801564791397000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comedits up to line 267 Done for today. Have embedded some comments using [[ .... ]] 2019-08-02 17:16:37 -070039341e860912b2cb3c96b415a38c9b387b135780edits up to line 267editdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdb71c7eb32ca26cff830f806f738a9277346a7e011564791754000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfinal changes for today 2019-08-02 17:22:34 -0700b71c7eb32ca26cff830f806f738a9277346a7e01final changes for todayeditdocs/eml-semantic-annotation-primer.md.travis.yml9079cdb032339a500fc4f5dc6c78bf08630329101564960257000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgTry to fix Travis build by switching to Java to get ant installed. 2019-08-04 16:10:57 -07009079cdb032339a500fc4f5dc6c78bf0863032910Try to fix Travis build by switching to Java to get ant installed.edit.travis.ymllib/eml.jar.travis.yml1a8bd26ce2cf853fdc5e6c230872720d87d560db1564960575000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd ant to APT install in Travis. 2019-08-04 16:16:15 -07001a8bd26ce2cf853fdc5e6c230872720d87d560dbAdd ant to APT install in Travis.edit.travis.ymleditlib/eml.jar.travis.ymlc34c723f40470c546d916ca261431bdc1e254f821564962315000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd ant-optional to the Travis build for JUnit support. 2019-08-04 16:45:15 -0700c34c723f40470c546d916ca261431bdc1e254f82Add ant-optional to the Travis build for JUnit support.edit.travis.ymlbuild.xml6680b1a727a306e7d142a7874a865d04451e93541564964081000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgHave JUnit prinnt test log to console for easier debugging. 2019-08-04 17:14:41 -07006680b1a727a306e7d142a7874a865d04451e9354Have JUnit prinnt test log to console for easier debugging.editbuild.xml.travis.ymldb3f7481fc00b15bc2e35c9eceac6918da8c9aae1564965776000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgIncrease memory to see if that is the StackOverflow error. 2019-08-04 17:42:56 -0700db3f7481fc00b15bc2e35c9eceac6918da8c9aaeIncrease memory to see if that is the StackOverflow error.edit.travis.yml.travis.yml6724b5fb697d0f4a1bc2754771e47b2818faea121564966321000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgTry bionnic to get a newer version of ant than 1.96. Seems that 1.97 fixes a common StackOverflowError. 2019-08-04 17:52:01 -07006724b5fb697d0f4a1bc2754771e47b2818faea12Try bionnic to get a newer version of ant than 1.96.edit.travis.yml.travis.ymlc7e0ec7cd3790048f809e1a306a7275b6fdaf35c1564967631000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgTry snaps rather than apt under bionic for package installs. 2019-08-04 18:13:51 -0700c7e0ec7cd3790048f809e1a306a7275b6fdaf35cTry snaps rather than apt under bionic for package installs.edit.travis.yml.travis.yml9e4b57fee4c019722c4aabf80b782f6159e66df91564967970000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgSwitch to using apt install directly, and skip the maven build. 2019-08-04 18:19:30 -07009e4b57fee4c019722c4aabf80b782f6159e66df9Switch to using apt install directly, and skip the maven build.edit.travis.yml.travis.ymlf4e17ef0c72ade50ef9ba6c67c5e918ad411dfa71564968170000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgTry updating the apt sources before the install. 2019-08-04 18:22:50 -0700f4e17ef0c72ade50ef9ba6c67c5e918ad411dfa7Try updating the apt sources before the install.edit.travis.yml.travis.ymldcab3a3537423daae842913c03d807640ed5eb871564968314000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgSwitch back to xenial. 2019-08-04 18:25:14 -0700dcab3a3537423daae842913c03d807640ed5eb87Switch back to xenial.edit.travis.yml.travis.yml4b777307fd4f31113fde83d6d002cde27abe19cc1564968625000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFIx target typo to 'before_install'. 2019-08-04 18:30:25 -07004b777307fd4f31113fde83d6d002cde27abe19ccFIx target typo to 'before_install'.edit.travis.yml.travis.ymla4f533e2c7eb96d26640d4a1aae22755acc4d6821564968826000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAnnd switch back to bionic now that apt is installing properly. 2019-08-04 18:33:46 -0700a4f533e2c7eb96d26640d4a1aae22755acc4d682Annd switch back to bionic now that apt is installing properly.edit.travis.yml.travis.yml13dc82941c6b67d36155dc24b1386cec2558f46b1564975903000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd custom downloaded version of ant (1.10.6) instead of what comes with xenial (1.9.6). 2019-08-04 20:31:43 -070013dc82941c6b67d36155dc24b1386cec2558f46bAdd custom downloaded version of ant (1.10.6) instead of what comes withedit.travis.yml.travis.yml81ebeb21b43e8fefe85395e6d62668b49f0df92b1564976157000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix path to 1.10.6 download. 2019-08-04 20:35:57 -070081ebeb21b43e8fefe85395e6d62668b49f0df92bFix path to 1.10.6 download.edit.travis.yml.travis.yml7a4ed400d41d5bbc362a60ec82e1163220af443c1564977982000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgCHeck if ant exists, and if not then download it. 2019-08-04 21:06:22 -07007a4ed400d41d5bbc362a60ec82e1163220af443cCHeck if ant exists, and if not then download it.edit.travis.yml.travis.ymla767313da46fe2a15e05310ecd6e6eff0ed69c6d1564978781000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd env var for Ant version to Travis. 2019-08-04 21:19:41 -0700a767313da46fe2a15e05310ecd6e6eff0ed69c6dAdd env var for Ant version to Travis.edit.travis.yml.travis.yml6debb06818e04515a80921375950eb291bf9f3b71564979349000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgTemporarily disable cache. 2019-08-04 21:29:09 -07006debb06818e04515a80921375950eb291bf9f3b7Temporarily disable cache.edit.travis.yml.travis.yml86d4feb231f8b006c00f0f14e61f540564f2bff91564979529000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgDOwnload Ant if the directory does NOT exist. 2019-08-04 21:32:09 -070086d4feb231f8b006c00f0f14e61f540564f2bff9DOwnload Ant if the directory does NOT exist.edit.travis.yml.travis.yml2828b7c3ec93f8ae6bfaaf633d1db917a1d372be1564980516000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgTry a larger stack size. See https://issues.apache.org/jira/browse/XERCESJ-589. 2019-08-04 21:48:36 -07002828b7c3ec93f8ae6bfaaf633d1db917a1d372beTry a larger stack size.edit.travis.yml.travis.yml051ff538403393369abf49147d5ecf74e330aecc1564980740000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgCache busted? 2019-08-04 21:52:20 -0700051ff538403393369abf49147d5ecf74e330aeccCache busted?edit.travis.ymllib/apache/xml-apis.jarlib/apache/xercesImpl.jarlib/xercesImpl.jarlib/serializer.jarlib/apache/xmlParserAPIs.jarlib/xalan-2.7.2.jarlib/xalan.jarlib/serializer-2.7.2.jarlib/xercesImpl-2.12.0.jar.travis.ymllib/apache/xalan.jarbuild.xmllib/xml-apis-1.4.01.jarlib/xml-apis-xerces-2.9.1.jardb125705254d568463b647c375757bcc992b7bc11564984808000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpgrade xerces and xalan to see if that fixes the StackOverflowErrors. 2019-08-04 23:00:08 -0700db125705254d568463b647c375757bcc992b7bc1Upgrade xerces and xalan to see if that fixes the StackOverflowErrors.deletelib/apache/xalan.jaraddlib/xalan-2.7.2.jardeletelib/xercesImpl.jaraddlib/serializer-2.7.2.jardeletelib/xml-apis-xerces-2.9.1.jaraddlib/xml-apis-1.4.01.jaredit.travis.ymldeletelib/apache/xml-apis.jardeletelib/xalan.jareditbuild.xmladdlib/xercesImpl-2.12.0.jardeletelib/serializer.jardeletelib/apache/xercesImpl.jardeletelib/apache/xmlParserAPIs.jar.travis.yml8285de26d7933faec5d7b4410659ef9823aff30f1564985142000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgPare back travis now that the xerces upgrade fixed the build. 2019-08-04 23:05:42 -07008285de26d7933faec5d7b4410659ef9823aff30fPare back travis now that the xerces upgrade fixed the build.edit.travis.ymldocs/eml-semantic-annotation-primer.md3647e52002e0dd6d321ebbe9d076ae15fb659d6e1565040951000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.commodifications throughout, now up to line 383, "URI 2019-08-05 14:35:51 -07003647e52002e0dd6d321ebbe9d076ae15fb659d6emodifications throughout, now up to line 383, "URIeditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdb6d3d9a6659eef6b7526fc25ecc32921a134b9441565048970000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.commodifications throughout, now up to 472 2019-08-05 16:49:30 -0700b6d3d9a6659eef6b7526fc25ecc32921a134b944modifications throughout, now up to 472editdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md072f54fdfd9998a54fede9ae7677b315532592691565059930000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comup to 644 2019-08-05 19:52:10 -0700072f54fdfd9998a54fede9ae7677b31553259269up to 644editdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md955b3a8162c300128c386adc28f86e0c4f7d7be51565124963000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfinished full pass-thru edit of semantic annotation primer 2019-08-06 13:56:03 -0700955b3a8162c300128c386adc28f86e0c4f7d7be5finished full pass-thru edit of semantic annotation primereditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md05ea93e2e1b4fcb4acb5557a7ef4552829f872a71565136837000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comminor edits to intro 2019-08-06 17:13:57 -070005ea93e2e1b4fcb4acb5557a7ef4552829f872a7minor edits to introeditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md5f6393138e8a457139a579479b2455df43cb55bb1565137118000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comminor edits to intro Make wording more consistent 2019-08-06 17:18:38 -07005f6393138e8a457139a579479b2455df43cb55bbminor edits to introeditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md70dc8fe346a4e5e56d79b96d99161e83b14b61671565199465000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comsuperficial edits 2019-08-07 10:37:45 -070070dc8fe346a4e5e56d79b96d99161e83b14b6167superficial editseditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mda4db47a32f0d24fad6683e72f1f0c83fb72294891565202041000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.commore superficial edits 2019-08-07 11:20:41 -0700a4db47a32f0d24fad6683e72f1f0c83fb7229489more superficial editseditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md7116bd33a3100964d0a5fb740afdbe1366e43f3b1565205949000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comyet more superficial edits 2019-08-07 12:25:49 -07007116bd33a3100964d0a5fb740afdbe1366e43f3byet more superficial editseditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdb729a2a426f748b365d6248d84c96d7990ab74131565311276000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdates to text, in light of warnings about `id`s in EML need to be either unique within a document, or properly scoped and referenced 2019-08-08 17:41:16 -0700b729a2a426f748b365d6248d84c96d7990ab7413updates to text, in light of warnings about `id`s in EML need to beeditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdc15156389dd5fa717d8ded33757a1a027c00bb131565373841000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate Examples 1 and 4 2019-08-09 11:04:01 -0700c15156389dd5fa717d8ded33757a1a027c00bb13update Examples 1 and 4editdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md410f2eb1683c6e860f9fd76f29a70adfb12b20f81565374748000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comupdate examples with Eric Seabloom's info 2019-08-09 11:19:08 -0700410f2eb1683c6e860f9fd76f29a70adfb12b20f8update examples with Eric Seabloom's infoeditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdc0bbe1d0b351ffaf91ecb229283ff3d461cd674a1565375428000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.commake examples consistent 2019-08-09 11:30:28 -0700c0bbe1d0b351ffaf91ecb229283ff3d461cd674amake examples consistenteditdocs/eml-semantic-annotation-primer.mddocs/build_book.R8068bb2e7fb0274652f99bbfb9a563b08d410a1f1565657776000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgForce copy the index.html even if it exists. 2019-08-12 17:56:16 -07008068bb2e7fb0274652f99bbfb9a563b08d410a1fForce copy 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shell script for deploying the built site. 2019-08-12 23:14:04 -070013425cbbe04161063686e104ad7739feb34ed86aAdd shell script for deploying the built 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ifdist/schema/img/eml-physical_xsd_Element_skipbytes.pngdocs/schema/img/eml-attribute_xsd_Element_definition.pngdist/schema/img/eml-text_xsd_Element_emphasis.pngdist/schema/img/eml-coverage_xsd_Element_taxonomicClassification.pngdist/schema/img/eml-project_xsd_Element_award.pngdist/schema/img/eml-dataset_xsd_Element_gettingStarted.pngdocs/schema/img/eml-coverage_xsd_Element_singleDateTime.pngdist/schema/img/eml-attribute_xsd_Element_entityReference.pngdocs/schema/img/eml-attribute_xsd_Element_externalCodeSet.pngdist/schema/img/eml-attribute_xsd_Element_bounds.pngdist/schema/img/eml-literature_xsd_Element_performer.pngdocs/schema/img/eml-entity_xsd_Element_otherEntity.pngdocs/schema/img/eml-attribute_xsd_Element_attribute.pngdocs/schema/img/eml-coverage_xsd_Element_repository.pngdist/schema/img/eml-methods_xsd_Element_studyExtent.pngdist/schema/img/eml-party_xsd_Element_onlineUrl.pngdocs/schema/img/eml-dataset_xsd_Element_changeScope.pngdocs/schema/img/eml-dataTable_xsd_Complex_Type_DataTableType.pngdist/schema/img/eml-entity_xsd_Element_annotation.pngdist/schema/img/eml-literature_xsd_Element_totalPages_2.pngdist/schema/img/eml-spatialRaster_xsd_Element_row.pngdist/schema/img/eml-attribute_xsd_Complex_Type_Accuracy.pngdist/schema/img/eml-physical_xsd_Element_physical.pngdist/schema/img/eml-spatialReference_xsd_Complex_Type_geogCoordSysType.pngdist/schema/img/eml-literature_xsd_Element_edition_1.pngdist/schema/img/eml-literature_xsd_Element_institution_1.pngdocs/schema/img/eml-attribute_xsd_Element_nonNumericDomain.pngdist/schema/img/eml-literature_xsd_Complex_Type_Book.pngdist/schema/img/eml-resource_xsd_Complex_Type_OnlineType.pngdocs/schema/img/eml-dataset_xsd_Element_gettingStarted.pngdist/schema/img/eml-dataset_xsd_Element_changeDate.pngdocs/schema/img/eml-dataset_xsd_Element_otherEntity.pngdocs/schema/img/Redefine12.gifdist/schema/img/eml-physical_xsd_Element_size.pngdist/schema/img/eml-protocol_xsd_Element_protocol.pngdist/schema/img/eml-spatialRaster_xsd_Simple_Type_ImagingConditionCode.pngdist/schema/img/eml_xsd_Element_annotation.pngdist/schema/img/eml-literature_xsd_Element_reprintEdition.pngdist/schema/img/eml-literature_xsd_Element_bibtex_1.pngdist/schema/img/eml-resource_xsd_Element_connectionDefinition.pngdist/schema/img/eml-resource_xsd_Element_schemeName.pngdocs/schema/img/Include12.gifdist/schema/img/eml-physical_xsd_Element_attributeOrientation.pngdist/schema/img/eml-spatialRaster_xsd_Element_toneGradation.pngdist/schema/img/eml-spatialReference_xsd_Element_datum.pngdist/schema/img/eml-project_xsd_Element_title.pngdist/schema/img/eml-methods_xsd_Element_methodStep.pnge07a5bc46dbf83d9d88c7419e1026f6f0d3c34701565711747000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgBuild schema docs directly into dist directory. 2019-08-13 08:55:47 -0700e07a5bc46dbf83d9d88c7419e1026f6f0d3c3470Build schema docs directly into dist 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mg/eml-attribute_xsd_Element_unit.pngdeletedocs/schema/img/eml-attribute_xsd_Element_attributeList.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_numberOfBands.pngeditdist/schema/img/eml-spatialVector_xsd_Simple_Type_TopologyLevel.pngeditdist/schema/img/eml-dataset_xsd_Element_acknowledgements.pngeditdist/schema/img/eml-resource_xsd_Element_description.pngeditdist/schema/img/eml-party_xsd_Element_phone.pngeditdist/schema/img/eml-attribute_xsd_Element_minimum_1.pngdeletedocs/schema/img/eml-coverage_xsd_Complex_Type_GRingPointType.pngeditdist/schema/img/eml-resource_xsd_Element_metadataProvider.pngdeletedocs/schema/img/eml-constraint_xsd_Element_Group_ForeignKeyGroup.pngdeletedocs/schema/img/eml-attribute_xsd_Element_pattern.pngeditdist/schema/img/eml-coverage_xsd_Element_identifierName.pngeditdist/schema/img/eml-physical_xsd_Element_externallyDefinedFormat.pngeditdist/schema/img/eml-methods_xsd_Element_citation_1.pngeditdist/schema/img/eml-constraint_xsd_Element_notNullConstraint.pngeditdist/schema/img/eml-constraint_xsd_Element_checkConstraint.pngdeletedocs/schema/eml-resource_xsd.htmldeletedocs/schema/img/eml-attribute_xsd_Element_dateTime.pngdeletedocs/schema/img/eml-attribute_xsd_Element_ordinal.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_illuminationElevationAngle.pngdeletedocs/schema/img/eml-coverage_xsd_Element_repository.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_xSlope.pngeditdist/schema/img/eml-literature_xsd_Element_publisher_6.pngeditdist/schema/img/eml-entity_xsd_Element_additionalInfo.pngeditdist/schema/img/eml-literature_xsd_Element_editor.pngdeletedocs/schema/img/eml-dataTable_xsd_Element_constraint.pngeditdist/schema/img/eml-resource_xsd_Element_connectionDefinition.pngdeletedocs/schema/img/eml-attribute_xsd_Element_bounds_1.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_rows.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_yCoordinate.pngeditdist/schema/img/eml-physical_xsd_Element_numPhysicalLinesPerRecord.pngeditdist/schema/img/eml-software_xsd_Element_checksum.pngeditdist/schema/img/eml-attribute_xsd_Element_entityReference.pngdocs/build_book.R8e9393ae1e4db105b602effffa54ee916fca52371565711793000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgNo longer need to copy the schema docs. They are directly generated in place. 2019-08-13 08:56:33 -07008e9393ae1e4db105b602effffa54ee916fca5237No longer need to copy the schema docs.editdocs/build_book.Rbin/deploy_site.sh3704c5365343eb8cb602ac8c5e70a1eab07f13bb1565711916000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgDeploy from the top level dist dir. 2019-08-13 08:58:36 -07003704c5365343eb8cb602ac8c5e70a1eab07f13bbDeploy from the top level dist dir.editbin/deploy_site.shdocs/eml-semantic-annotation-primer.mdbcd56c57f9e70e17675450f8967c3e8f5d2a1dcc1565741910000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduinitial edits to glossary and FAQ. added glossary entries for jsonld and iri. shortened rdf-faqs. reworded Q on dereference 2019-08-13 20:18:30 -0400bcd56c57f9e70e17675450f8967c3e8f5d2a1dccinitial edits to glossary and FAQ. added glossary entries for jsonld andeditdocs/eml-semantic-annotation-primer.mdstyle/eml_appinfo2documentation.xsl2b6a46dcedc9b84539c89142f8b25bfed41b88a41565743930000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgReformat for proper indentation. 2019-08-13 17:52:10 -07002b6a46dcedc9b84539c89142f8b25bfed41b88a4Reformat for proper indentation.editstyle/eml_appinfo2documentation.xslstyle/eml_appinfo2documentation.xsle83ce11ddb2674f314803f49b71e98359739f80f1565744423000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix 2.2.0 namespace and add examples. 2019-08-13 18:00:23 -0700e83ce11ddb2674f314803f49b71e98359739f80fFix 2.2.0 namespace and add 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-literature_xsd_Element_numberOfVolumes.pngdist/schema/img/eml-physical_xsd_Element_skipbytes.pngdist/schema/img/eml-text_xsd_Complex_Type_ParagraphType.pngdist/schema/img/eml-spatialReference_xsd_Element_depthDistanceUnits.pngdist/schema/img/eml-text_xsd_Element_emphasis.pngdist/schema/img/eml-coverage_xsd_Element_taxonomicClassification.pngdist/schema/img/eml-constraint_xsd_Element_childOccurences.pngdist/schema/img/eml-party_xsd_Element_address.pngdist/schema/img/eml-software_xsd_Element_software_1.pngdist/schema/img/eml-project_xsd_Element_award.pngdist/schema/img/eml-dataset_xsd_Element_gettingStarted.pngdist/schema/img/eml-attribute_xsd_Element_entityReference.pngdist/schema/img/eml-attribute_xsd_Element_bounds.pngdist/schema/img/eml-literature_xsd_Element_performer.pngdist/schema/img/eml-methods_xsd_Element_studyExtent.pngdist/schema/img/eml-party_xsd_Element_onlineUrl.pngdist/schema/eml-constraint_xsd.htmldist/schema/img/eml-attribute_xsd_Element_coverage.pngdist/schema/img/eml-entity_xsd_Element_methods.pngdist/schema/img/eml-entity_xsd_Element_annotation.pngdist/schema/img/eml-literature_xsd_Element_totalPages_2.pngdist/schema/img/eml-spatialRaster_xsd_Element_row.pngdist/data-structure-modules.htmldist/schema/img/eml-physical_xsd_Element_physical.pngdist/schema/img/eml-attribute_xsd_Complex_Type_Accuracy.pngdist/schema/img/eml-spatialReference_xsd_Complex_Type_geogCoordSysType.pngdist/schema/img/eml-literature_xsd_Element_audioVisual.pngdist/schema/img/eml-literature_xsd_Element_edition_1.pngdist/schema/img/eml-spatialVector_xsd_Simple_Type_GeometryType.pngdist/schema/img/eml-physical_xsd_Element_layout.pngdist/schema/img/eml-attribute_xsd_Element_numericDomain_1.pngdist/schema/img/eml-literature_xsd_Element_institution_1.pngdist/schema/img/eml-constraint_xsd_Complex_Type_ConstraintType.pngdist/schema/img/eml-literature_xsd_Complex_Type_Book.pngdist/schema/img/eml-resource_xsd_Complex_Type_OnlineType.pngdist/schema/img/eml-dataset_xsd_Element_dataTable.pngdist/schema/img/eml-dataset_xsd_Element_changeDate.pngdist/schema/img/eml-literature_xsd_Element_referenceType.pngdist/schema/img/eml-methods_xsd_Element_spatialSamplingUnits.pngdist/schema/img/eml-resource_xsd_Element_mediumDensity.pngdist/schema/img/eml-physical_xsd_Element_size.pngdist/schema/img/eml-spatialRaster_xsd_Element_verticals.pngdist/schema/img/eml-protocol_xsd_Element_protocol.pngdist/schema/img/eml-spatialRaster_xsd_Simple_Type_ImagingConditionCode.pngdist/schema/img/eml-unitTypeDefinitions_xsd_Simple_Type_unit_angleUnitType.pngdist/schema/img/eml_xsd_Element_annotation.pngdist/schema/img/eml-literature_xsd_Element_reprintEdition.pngdist/schema/img/eml-resource_xsd_Element_connectionDefinition.pngdist/schema/img/eml-literature_xsd_Element_bibtex_1.pngdist/about-this-book.htmldist/schema/img/eml-resource_xsd_Element_schemeName.pngdist/schema/img/eml-project_xsd_Element_studyAreaDescription.pngdist/schema/img/eml-spatialRaster_xsd_Element_filmDistortionInformationAvailability.pngdist/schema/img/eml-literature_xsd_Element_publisher_3.pngdist/schema/img/eml-physical_xsd_Element_attributeOrientation.pngdist/schema/img/eml-semantics_xsd_Complex_Type_SemanticAnnotation.pngdist/schema/img/eml-spatialRaster_xsd_Element_toneGradation.pngdist/schema/img/eml-constraint_xsd_Element_key_2.pngdist/schema/img/eml-spatialReference_xsd_Element_datum.pngdist/schema/img/eml-project_xsd_Element_title.pngdist/schema/img/eml-methods_xsd_Element_methodStep.pngbfecaeb9028dd0d2969ccf5f86ff481307a866531565744845000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRegenerated schema docs with proper ns, and added to book. Current schema docs are now in chapter 9 of the book in an iframe, but the frame is sized incorrectly to properly display the pages. Look into adjustinng CSS for that iframe. 2019-08-13 18:07:25 -0700bfecaeb9028dd0d2969ccf5f86ff481307a86653Regenerated schema docs with proper ns, and added to book.editdist/schema/img/eml-physical_xsd_Element_authentication.pngeditdist/schema/img/eml-coverage_xsd_Element_taxonomicCoverage.pngeditdist/schema/img/eml-text_xsd_Element_citetitle.pngeditdist/schema/img/eml-literature_xsd_Element_ISBN_2.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_illuminationElevationAngle.pngeditdist/schema/img/eml-resource_xsd_Simple_Type_KeyTypeCode.pngeditdist/schema/img/eml-constraint_xsd_Element_attributeReference_4.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_pointInPixel_1.pngeditdist/schema/img/eml-spatialVector_xsd_Element_accuracyReport.pngeditdist/schema/img/eml-spatialRaster_xsd_Complex_Type_DataQuality.pngeditdist/schema/img/eml-physical_xsd_Element_online.pngeditdist/schema/img/eml-physical_xsd_Element_externallyDefinedFormat.pngeditdist/schema/img/eml-literature_xsd_Element_ISBN.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_imageOrientationAngle.pngeditdist/schema/img/eml-physical_xsd_Element_encodingMethod.pngeditdist/schema/img/eml-spatialReference_xsd_Element_parameter.pngeditdist/schema/img/eml-view_xsd_Element_view.pngeditdist/schema/img/eml-coverage_xsd_Complex_Type_TaxonomicCoverage.pngeditdist/schema/img/eml_xsd_Element_annotations.pngeditdist/schema/img/eml-dataset_xsd_Complex_Type_MaintenanceType.pngeditdist/schema/eml-attribute_xsd.htmleditdist/schema/img/eml-entity_xsd_Element_entityName.pngeditdist/schema/eml_xsd.htmleditdist/schema/img/eml-resource_xsd_Element_mediumNote.pngeditdist/schema/img/eml-literature_xsd_Element_map.pngeditdist/schema/img/eml-unitTypeDefinitions_xsd_Simple_Type_unit_angleUnitType.pngeditdist/schema/img/eml-dataset_xsd_Element_changeHistory.pngeditdist/schema/img/eml-project_xsd_Simple_Type_DescriptorType.pngeditdist/schema/img/eml-literature_xsd_Element_article.pngeditdist/schema/img/eml-software_xsd_Element_software_1.pngeditdist/schema/img/eml-view_xsd_Element_queryStatement.pngeditdist/schema/img/eml-literature_xsd_Element_conferenceName_1.pngeditdist/schema/img/eml-constraint_xsd_Element_Group_ConstraintBaseGroup.pngeditdist/schema/img/eml-literature_xsd_Element_chapterNumber.pngeditdist/schema/img/eml-literature_xsd_Element_referenceType.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_constraint.pngeditdist/schema/img/eml-physical_xsd_Element_nbits.pngeditdist/schema/img/eml-methods_xsd_Element_spatialSamplingUnits.pngeditdist/schema/img/eml-spatialReference_xsd_Element_geogCoordSys_1.pngeditdist/schema/img/eml-physical_xsd_Element_layout.pngeditdist/schema/img/eml-project_xsd_Element_researchProject.pngeditdist/schema/img/eml-resource_xsd_Element_shortName.pngeditdist/schema/img/eml-dataset_xsd_Element_comment.pngeditdist/schema/img/eml-protocol_xsd_Element_proceduralStep.pngeditdist/schema/img/eml-physical_xsd_Element_quoteCharacter_1.pngeditdist/schema/img/eml-literature_xsd_Element_reviewedItem.pngeditdist/schema/img/eml-attribute_xsd_Element_numericDomain.pngeditdist/schema/img/eml-constraint_xsd_Element_constraintDescription.pngeditdist/schema/img/eml-literature_xsd_Element_totalPages.pngeditdist/schema/img/eml-coverage_xsd_Element_rangeOfDates.pngeditdist/schema/img/eml-literature_xsd_Element_totalPages_1.pngeditdist/schema/img/eml-physical_xsd_Element_fieldWidth.pngeditdist/schema/img/eml-literature_xsd_Element_degree.pngeditdist/schema/img/eml-literature_xsd_Element_totalTables.pngeditdist/schema/img/eml_xsd_Element_additionalMetadata.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_toneGradation.pngeditdist/schema/img/eml-text_xsd_Complex_Type_SubSuperScriptType.pngeditdist/schema/img/eml-constraint_xsd_Element_uniqueKey.pngeditdist/schema/img/eml-entity_xsd_Element_attributeList.pngeditdist/schema/img/eml-constraint_xsd_Element_attributeReference.pngeditdist/schema/img/eml-resource_xsd_Element_alternateIdentifier.pngeditdist/schema/img/eml-physical_xsd_Element_compressionMethod.pngeditdist/schema/img/eml-physical_xsd_Element_literalCharacter.pngeditdist/schema/img/eml-software_xsd_Element_language.pngeditdist/schema/img/eml-storedProcedure_xsd_Element_required.pngeditdist/schema/img/eml-dataTable_xsd_Element_caseSensitive.pngeditdist/schema/img/eml-literature_xsd_Element_publicationPlace_1.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_horizontalAccuracy.pngeditdist/schema/img/eml-literature_xsd_Element_publisher_5.pngeditdist/schema/img/eml-coverage_xsd_Element_southBoundingCoordinate.pngeditdist/schema/img/eml-resource_xsd_Element_associatedParty.pngeditdist/schema/img/eml-dataset_xsd_Element_usageCitation.pngeditdist/schema/img/eml-resource_xsd_Element_annotation.pngeditdist/schema/img/eml-coverage_xsd_Element_gRing.pngeditdist/index.htmleditdist/schema/img/eml-spatialReference_xsd_Element_vertCoordSys.pngeditdist/schema/img/eml-literature_xsd_Element_publisher_6.pngeditdist/schema/img/eml-resource_xsd_Complex_Type_i18nNonEmptyStringType.pngeditdist/schema/img/eml-software_xsd_Element_runtimeMemoryUsage.pngeditdist/schema/img/eml-attribute_xsd_Element_attributeLabel.pngeditdist/schema/img/eml-literature_xsd_Element_publicationPlace.pngeditdist/schema/img/eml-coverage_xsd_Element_timeScaleAgeExplanation.pngeditdist/schema/img/eml-coverage_xsd_Element_geographicDescription.pngeditdist/schema/img/eml-entity_xsd_Element_alternateIdentifier.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_cellSizeYDirection.pngeditdist/schema/img/eml-literature_xsd_Element_editor.pngeditdist/schema/img/eml-physical_xsd_Element_collapseDelimiters_1.pngeditdist/schema/img/eml-coverage_xsd_Element_taxonomicProcedures.pngeditdist/schema/img/eml-dataTable_xsd_Element_numberOfRecords.pngeditdist/schema/img/eml-text_xsd_Element_value.pngeditdist/schema/img/eml-attribute_xsd_Element_formatString.pngeditdist/schema/img/eml-coverage_xsd_Element_timeScaleCitation.pngeditdist/schema/img/eml-text_xsd_Element_emphasis.pngeditdist/schema/img/eml-attribute_xsd_Element_dateTimeDomain.pngeditdist/schema/img/eml-resource_xsd_Complex_Type_ConnectionType.pngeditdist/schema/img/eml-spatialReference_xsd_Element_depthResolution.pngeditdist/schema/img/eml-spatialReference_xsd_Element_projection.pngeditdist/schema/img/eml-literature_xsd_Element_publisher_2.pngeditdist/schema/img/eml-constraint_xsd_Element_foreignKey.pngeditdist/schema/img/eml-literature_xsd_Element_edition_2.pngeditdist/schema/img/eml-resource_xsd_Element_mediumName.pngeditdist/schema/img/eml-storedProcedure_xsd_Element_attributeList.pngeditdocs/_bookdown.ymleditdist/schema/img/eml-project_xsd_Element_funderName.pngeditdist/schema/img/eml-text_xsd_Element_para.pngeditdist/schema/img/eml-literature_xsd_Element_geographicCoverage.pngeditdist/schema/img/eml-attribute_xsd_Element_numericDomain_1.pngeditdist/schema/img/eml-literature_xsd_Element_totalTables_1.pngeditdist/schema/img/eml_xsd_Element_metadata.pngeditdist/schema/img/eml-attribute_xsd_Element_nonNumericDomain.pngeditdist/schema/img/eml-physical_xsd_Element_byteorder.pngeditdist/schema/img/eml-party_xsd_Element_surName.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_lowWaveLength.pngeditdist/schema/img/eml-coverage_xsd_Element_altitudeMinimum.pngeditdist/schema/img/eml-coverage_xsd_Element_westBoundingCoordinate.pngeditdist/schema/img/eml-resource_xsd_Complex_Type_UrlType.pngeditdist/schema/img/eml-attribute_xsd_Element_codesetName.pngeditdist/schema/img/eml_xsd_Element_annotation.pngeditdist/schema/img/eml-attribute_xsd_Element_measurementScale.pngeditdist/schema/img/eml-constraint_xsd_Element_key.pngeditdist/schema/img/eml-coverage_xsd_Element_taxonomicClassification.pngeditdist/about-this-book.htmleditdist/data-structure-modules.htmleditdist/schema/img/eml-attribute_xsd_Element_textDomain.pngeditdist/schema/img/eml-resource_xsd_Element_defaultValue.pngeditdist/schema/img/eml-software_xsd_Element_size.pngeditdist/schema/img/eml-semantics_xsd_Element_valueURI.pngeditdist/schema/img/eml-text_xsd_Element_itemizedlist.pngeditdist/schema/img/eml-attribute_xsd_Element_Group_BoundsGroup.pngeditdist/schema/img/eml-constraint_xsd_Element_parentOccurences.pngeditdist/schema/img/eml-spatialReference_xsd_Element_depthSysDef.pngeditdist/schema/img/eml-methods_xsd_Element_description.pngeditdist/schema/img/eml-methods_xsd_Complex_Type_MethodsType.pngeditdist/schema/img/eml-spatialVector_xsd_Element_verticalAccuracy.pngeditdist/schema/img/eml-physical_xsd_Element_size.pngeditdist/schema/img/eml-spatialVector_xsd_Element_quantitativeAccuracyReport.pngeditdist/schema/img/eml-attribute_xsd_Element_annotation.pngeditdist/schema/img/eml-literature_xsd_Element_report.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_rasterOrigin.pngeditdist/schema/img/eml-physical_xsd_Element_url.pngeditdist/schema/img/eml-literature_xsd_Element_bibtex.pngeditdist/schema/img/eml-physical_xsd_Element_lineNumber_1.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_column.pngeditdist/schema/img/eml-literature_xsd_Element_publisher.pngeditdist/schema/img/eml-spatialRaster_xsd_Simple_Type_CellGeometryType.pngeditdist/schema/img/eml-coverage_xsd_Complex_Type_GRingPointType.pngeditdist/schema/eml-dataTable_xsd.htmleditdist/schema/img/eml-resource_xsd_Element_series.pngeditdist/schema/img/eml-literature_xsd_Element_totalPages_2.pngeditdist/schema/img/eml-coverage_xsd_Element_specimen.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_imageQualityCode.pngeditdist/schema/img/eml-software_xsd_Element_dependency_1.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_peakResponse.pngeditdist/schema/img/eml-resource_xsd_Element_creator.pngeditdist/schema/img/eml-dataset_xsd_Element_changeScope.pngeditdist/schema/img/eml-text_xsd_Complex_Type_ParagraphType.pngeditdist/schema/img/eml-methods_xsd_Element_samplingDescription.pngeditdist/schema/img/eml-software_xsd_Element_distribution.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_spatialRaster.pngeditdist/schema/img/eml-attribute_xsd_Element_quantitativeAttributeAccuracyAssessment.pngeditdist/schema/img/eml-entity_xsd_Element_entityType.pngeditdist/schema/img/eml-physical_xsd_Eleme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t_country.pngeditdist/schema/img/eml-project_xsd_Element_description.pngeditdist/schema/img/eml-view_xsd_Element_constraint.pngeditdist/schema/img/eml-resource_xsd_Element_description.pngeditdist/schema/img/eml-spatialVector_xsd_Element_geometry.pngeditdist/schema/img/eml-literature_xsd_Element_publicationPlace_5.pngeditdist/features.htmleditdist/schema/eml-party_xsd.htmleditdist/schema/img/eml-project_xsd_Element_funding.pngeditdist/schema/img/eml-coverage_xsd_Complex_Type_SingleDateTimeType.pngeditdist/schema/img/eml-dataset_xsd_Element_changeDate.pngeditdist/schema/img/eml-literature_xsd_Element_communicationType.pngeditdist/schema/img/eml-resource_xsd_Element_metadataProvider.pngeditdist/schema/img/eml-semantics_xsd_Complex_Type_SemanticAnnotation.pngeditdist/schema/img/eml-attribute_xsd_Element_dateTimePrecision.pngeditdist/schema/eml-protocol_xsd.htmleditdist/schema/img/eml-resource_xsd_Element_keywordThesaurus.pngeditdist/schema/img/eml-literature_xsd_Element_volume_1.pngeditdist/schema/img/eml-spatialReference_xsd_Element_projCoordSys.pngeditdist/schema/img/eml-attribute_xsd_Element_attributeList.pngeditdist/schema/img/eml-literature_xsd_Complex_Type_Thesis.pngeditdist/schema/img/eml-spatialReference_xsd_Element_spheroid.pngeditdist/schema/img/eml-literature_xsd_Element_chapter.pngeditdist/schema/img/eml-party_xsd_Complex_Type_ResponsibleParty.pngeditdist/schema/img/eml-spatialVector_xsd_Complex_Type_DataQuality.pngdocs/eml-semantic-annotation-primer.md59255dc9bfe6d864a90eaf9067ec7fac75d7dc121565751193000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduIntroduction only: ids in EML with link to new FAQ. added short section on wording conventions (musts vs shoulds). small wording changes 2019-08-13 22:53:13 -040059255dc9bfe6d864a90eaf9067ec7fac75d7dc12Introduction only: ids in EML with link to new FAQ. added short sectioneditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md946703295a010533e588ea915b63034815cd368b1565752081000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edureplaced the extra paras after examples 1-3 with place holders to a FAQ (likely to have links, eg to URIs). will write that next. 2019-08-13 23:08:01 -0400946703295a010533e588ea915b63034815cd368breplaced the extra paras after examples 1-3 with place holders to a FAQeditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md03894761bbf2cd988c0257bb790674ccca196d6f1565752590000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edutypos only 2019-08-13 23:16:30 -040003894761bbf2cd988c0257bb790674ccca196d6ftypos onlyeditdocs/eml-semantic-annotation-primer.mddocs/images/RDF_example_b.pngd48f1768aab1add887b041862cea2e4baeca080d1565793627000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edureplaced people graph, correct person 2019-08-14 10:40:27 -0400d48f1768aab1add887b041862cea2e4baeca080dreplaced people graph, correct personeditdocs/images/RDF_example_b.pngbuild.xmleml-documentation.xsl_config.ymleml-spatialReferenceDictionary.xmlfd16cc81dfcb3dd31dc0a39965adc91ecd47751d1565799052000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate 2.2.0 namespace in additional files. 2019-08-14 09:10:52 -0700fd16cc81dfcb3dd31dc0a39965adc91ecd47751dUpdate 2.2.0 namespace in additional files.editeml-documentation.xsldelete_config.ymleditbuild.xmlediteml-spatialReferenceDictionary.xmldocs/eml-semantic-annotation-primer.mdc888504202e2c61e45daff88bfbde561fec57eef1565810174000http://jenkins-ucsb-1.dataone.org/jenkins/user/stevan.earlstevan.earlstevan.earl@asu.eduediting annotation section to improve readability 2019-08-14 15:16:14 -0400c888504202e2c61e45daff88bfbde561fec57eefediting annotation section to improve readabilityeditdocs/eml-semantic-annotation-primer.mdbin/oxygen_documentation_settings.xmle45ffb16ebe835360f6e90338025da3c2892d9881565810628000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduset to false: detailsSource, detailsUsedBy, set to true: includeLocalComponents 2019-08-14 15:23:48 -0400e45ffb16ebe835360f6e90338025da3c2892d988set to false: detailsSource, detailsUsedBy, set to 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schema doc html files with new configuration. 2019-08-14 14:22:53 -07002649bdbd692e58a2cea0d991d160e04958729469Update schema doc html files with new configuration.editdist/schema/img/eml-project_xsd_Element_personnel.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_xSlope.pngeditdist/schema/img/eml-coverage_xsd_Element_endDate.pngeditdist/schema/img/eml-literature_xsd_Element_publisher_5.pngeditdist/schema/img/eml-coverage_xsd_Element_altitudeMaximum.pngeditdist/schema/img/eml-physical_xsd_Element_collapseDelimiters_1.pngeditdist/schema/img/eml-dataset_xsd_Element_changeScope.pngeditdist/schema/img/eml-project_xsd_Element_funding.pngeditdist/schema/img/eml-dataset_xsd_Element_oldValue.pngeditdist/schema/img/eml-text_xsd_Element_section_1.pngeditdist/schema/eml-storedProcedure_xsd.htmleditdist/schema/img/eml-constraint_xsd_Element_key.pngeditdist/schema/img/eml-entity_xsd_Element_entityName.pngeditdist/schema/img/eml-spatialVector_xsd_Element_geometry.pngeditdist/schema/eml-dataTable_xsd.htmleditdist/schema/img/eml-resource_xsd_Complex_Type_OnlineType.pngeditdist/schema/img/eml-attribute_xsd_Element_citation.pngeditdist/schema/img/eml-attribute_xsd_Element_codesetName.pngeditdist/schema/img/eml-text_xsd_Complex_Type_i18nString.pngeditdist/schema/img/eml-attribute_xsd_Element_orderAttributeReference.pngeditdist/schema/img/eml-coverage_xsd_Element_eastBoundingCoordinate.pngeditdist/schema/img/eml-physical_xsd_Element_externallyDefinedFormat.pngeditdist/schema/img/eml-spatialReference_xsd_Element_altitudeDistanceUnits.pngeditdist/schema/img/eml-documentation_xsd_Element_standAlone.pngeditdist/schema/img/eml-constraint_xsd_Element_cardinality.pngeditdist/schema/img/eml-literature_xsd_Element_pageRange_1.pngeditdist/schema/img/eml-coverage_xsd_Complex_Type_TaxonomicCoverage.pngeditdist/schema/img/eml-literature_xsd_Element_publicationPlace_4.pngeditdist/schema/img/eml-methods_xsd_Element_studyExtent.pngeditdist/schema/img/eml-attribute_xsd_Complex_Type_PrecisionType.pngeditdist/schema/img/eml-methods_xsd_Element_software.pngeditdist/schema/img/eml-access_xsd_Element_access.pngeditdist/schema/img/eml-resource_xsd_Element_name_1.pngeditdist/schema/img/eml-coverage_xsd_Element_repository.pngeditdist/schema/img/eml-project_xsd_Element_designDescription.pngeditdist/schema/img/eml-literature_xsd_Element_publicationPlace_2.pngeditdist/schema/img/eml-physical_xsd_Element_numPhysicalLinesPerRecord.pngeditdist/schema/img/eml-resource_xsd_Element_title.pngeditdist/schema/img/eml_xsd_Element_software.pngeditdist/schema/img/eml-literature_xsd_Element_conferenceDate.pngeditdist/schema/img/eml-literature_xsd_Element_map.pngeditdist/schema/img/eml-resource_xsd_Element_distribution.pngeditdist/schema/img/eml-resource_xsd_Element_schemeName.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_numberOfBands.pngeditdist/schema/img/eml-coverage_xsd_Element_timeScaleCitation.pngeditdist/schema/img/eml-resource_xsd_Element_intellectualRights.pngeditdist/schema/img/eml-coverage_xsd_Complex_Type_SingleDateTimeType.pngeditdist/schema/img/eml-physical_xsd_Element_physical.pngeditdist/schema/img/eml-text_xsd_Element_subscript.pngeditdist/schema/img/eml-spatialVector_xsd_Simple_Type_TopologyLevel.pngeditdist/schema/img/eml-attribute_xsd_Element_dateTime.pngeditdist/schema/img/eml-text_xsd_Element_superscript_1.pngeditdist/schema/img/eml-coverage_xsd_Element_timeScaleAgeUncertainty.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_attributeList.pngeditdist/schema/img/eml-attribute_xsd_Element_unit_1.pngeditdist/schema/img/eml-literature_xsd_Element_bibtex.pngeditdist/schema/img/eml-spatialVector_xsd_Element_topologyLevel.pngeditdist/schema/img/eml-literature_xsd_Element_ISBN_2.pngeditdist/schema/img/eml-entity_xsd_Element_annotation.pngeditdist/schema/img/eml-physical_xsd_Element_characterEncoding.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_verticalAccuracy.pngeditdist/schema/img/eml-attribute_xsd_Element_definitionAttributeReference.pngeditdist/schema/img/eml-literature_xsd_Complex_Type_ConferenceProceedings.pngeditdist/schema/img/eml-literature_xsd_Element_bibtex_1.pngeditdist/schema/img/eml-spatialReference_xsd_Element_datum.pngeditdist/schema/img/eml-view_xsd_Element_queryStatement.pngeditdist/schema/img/eml-resource_xsd_Element_online.pngeditdist/schema/img/eml-text_xsd_Element_markdown.pngeditdist/schema/img/eml-software_xsd_Element_size.pngeditdist/schema/img/eml-attribute_xsd_Element_Group_BoundsGroup.pngeditdist/schema/img/eml-party_xsd_Element_electronicMailAddress.pngeditdist/schema/img/eml-attribute_xsd_Element_enumeratedDomain.pngeditdist/schema/img/eml-party_xsd_Element_userId.pngeditdist/schema/img/eml_xsd_Element_eml.pngeditdist/schema/img/eml-resource_xsd_Element_series.pngeditdist/schema/img/eml-methods_xsd_Element_methodStep.pngeditdist/schema/img/eml-constraint_xsd_Element_attributeReference_1.pngeditdist/schema/img/eml-dataTable_xsd_Element_caseSensitive.pngeditdist/schema/img/eml-protocol_xsd_Element_proceduralStep.pngeditdist/schema/img/eml-text_xsd_Element_text.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_accuracyReport.pngeditdist/schema/img/eml-software_xsd_Complex_Type_DependencyType.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_illuminationElevationAngle.pngeditdist/schema/img/eml-attribute_xsd_Element_attributeName.pngeditdist/schema/img/eml-literature_xsd_Element_originalPublication.pngeditdist/schema/img/eml-spatialReference_xsd_Element_unit.pngeditdist/schema/img/eml-literature_xsd_Element_numberOfVolumes_1.pngeditdist/schema/img/eml-physical_xsd_Element_nbits.pngeditdist/schema/img/eml-constraint_xsd_Element_Group_ConstraintBaseGroup.pngeditdist/schema/img/eml-dataset_xsd_Element_gettingStarted.pngeditdist/schema/img/eml-physical_xsd_Element_lineNumber.pngeditdist/schema/img/eml-literature_xsd_Element_totalTables.pngeditdist/schema/img/eml-project_xsd_Complex_Type_ResearchProjectType.pngeditdist/schema/img/eml-attribute_xsd_Element_attributeLabel.pngeditdist/schema/img/eml-attribute_xsd_Element_attribute.pngeditdist/schema/img/eml-resource_xsd_Element_annotation.pngeditdist/schema/eml-spatialRaster_xsd.htmleditdist/schema/img/eml-physical_xsd_Element_offline.pngeditdist/schema/img/eml-physical_xsd_Element_rowColumnOrientation.pngeditdist/schema/img/eml-software_xsd_Element_dependency_1.pngeditdist/schema/img/eml-literature_xsd_Element_bookTitle.pngeditdist/schema/img/eml-software_xsd_Element_machineProcessor.pngeditdist/schema/img/eml-coverage_xsd_Element_datasetGPolygon.pngeditdist/schema/img/eml-coverage_xsd_Element_rangeOfDates.pngeditdist/schema/img/eml-coverage_xsd_Element_timeScaleName.pngeditdist/schema/img/eml-spatialRaster_xsd_Simple_Type_ImagingConditionCode.pngeditdist/schema/img/eml-text_xsd_Element_itemizedlist.pngeditdist/schema/img/eml-resource_xsd_Simple_Type_FunctionType.pngeditdist/schema/img/eml-attribute_xsd_Element_attributeDefinition.pngeditdist/schema/img/eml-literature_xsd_Element_manuscript.pngeditdist/schema/img/eml-attribute_xsd_Element_bounds_1.pngeditdist/schema/img/eml-constraint_xsd_Element_referencedKey.pngeditdist/schema/img/eml-text_xsd_Complex_Type_ParagraphType.pngeditdist/schema/img/eml-resource_xsd_Complex_Type_ConnectionDefinitionType.pngeditdist/schema/img/eml-spatialVector_xsd_Element_constraint.pngeditdist/schema/img/eml-dataset_xsd_Element_changeDate.pngeditdist/schema/img/eml-literature_xsd_Element_editor.pngeditdist/schema/img/eml-software_xsd_Element_licenseURL.pngeditdist/schema/img/eml-attribute_xsd_Element_codeExplanation.pngeditdist/schema/img/eml-attribute_xsd_Element_formatString.pngeditdist/schema/img/eml-entity_xsd_Element_entityDescription.pngeditdist/schema/img/eml-attribute_xsd_Element_measurementScale.pngeditdist/schema/img/eml-constraint_xsd_Element_checkCondition.pngeditdist/schema/img/eml-literature_xsd_Element_edition.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_triangulationIndicator.pngeditdist/schema/img/eml-access_xsd_Element_deny.pngeditdist/schema/img/eml-party_xsd_Element_party.pngeditdist/schema/img/eml-resource_xsd_Element_metadataProvider.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_columns.pngeditdist/schema/img/eml-dataset_xsd_Element_contact.pngeditdist/schema/img/eml-attribute_xsd_Element_interval.pngeditdist/schema/img/eml-literature_xsd_Element_report.pngeditdist/schema/img/eml-physical_xsd_Element_byteorder.pngeditdist/schema/img/eml-resource_xsd_Element_onlineDescription.pngeditdist/schema/img/eml-software_xsd_Element_diskUsage.pngeditdist/schema/eml-methods_xsd.htmleditdist/schema/img/eml-attribute_xsd_Element_valueAttributeReference.pngeditdist/schema/img/eml-coverage_xsd_Element_altitudeMinimum.pngeditdist/schema/img/eml-literature_xsd_Element_journal.pngeditdist/schema/img/eml-spatialRaster_xsd_Complex_Type_DataQuality.pngeditdist/schema/img/eml-attribute_xsd_Element_maximum_1.pngeditdist/schema/img/eml-dataset_xsd_Element_dataTable.pngeditdist/schema/img/eml-software_xsd_Element_programmingLanguage.pngeditdist/schema/eml-entity_xsd.htmleditdist/schema/img/eml-attribute_xsd_Element_attributeAccuracyReport.pngeditdist/schema/eml-access_xsd.htmleditdist/schema/img/eml-spatialRaster_xsd_Element_constraint.pngeditdist/schema/img/eml-spatialRaster_xsd_Complex_Type_SpatialRasterType.pngeditdist/schema/img/eml-attribute_xsd_Element_definition.pngeditdist/schema/img/eml-constraint_xsd_Element_attributeReference_4.pngeditdist/schema/img/eml-coverage_xsd_Element_southBoundingCoordinate.pngeditdist/schema/img/eml-physical_xsd_Element_encodingMethod.pngeditdist/schema/img/eml-resource_xsd_Element_keywordThesaurus.pngeditdist/schema/img/eml_xsd_Element_additionalMetadata.pngeditdist/schema/img/eml-text_xsd_Element_emphasis.pngeditdist/schema/img/eml-physical_xsd_Element_compressionMethod.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_imageQualityCode.pngeditdist/schema/img/eml-text_xsd_Element_orderedlist.pngeditdist/schema/img/eml-resource_xsd_Element_creator.pngeditdist/schema/img/eml-resource_xsd_Element_mediumName.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_imageDescription.pngeditdist/schema/img/eml-software_xsd_Element_ch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lement_repeats.pngeditdist/schema/img/eml-literature_xsd_Element_publicationPlace_5.pngeditdist/schema/img/eml-documentation_xsd_Element_tooltip.pngeditdist/schema/img/eml-resource_xsd_Element_mediumDensity.pngeditdist/schema/img/eml_xsd_Element_annotations.pngeditdist/schema/img/eml-coverage_xsd_Element_beginDate.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_yIntercept.pngeditdist/schema/img/eml-resource_xsd_Element_connectionDefinition_1.pngeditdist/schema/img/eml-project_xsd_Element_coverage.pngeditdist/schema/img/eml-unitTypeDefinitions_xsd_Simple_Type_unit_angleUnitType.pngeditdist/schema/img/eml-literature_xsd_Element_contact.pngeditdist/schema/img/eml-spatialReference_xsd_Element_vertCoordSys.pngeditdist/schema/img/eml-attribute_xsd_Element_methods.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_cellSizeXDirection.pngeditdist/schema/img/eml-resource_xsd_Simple_Type_KeyTypeCode.pngeditdist/schema/img/eml-constraint_xsd_Element_constraintName.pngeditdist/schema/img/eml-party_xsd_Complex_Type_ResponsibleParty.pngeditdist/schema/img/eml-physical_xsd_Element_maxRecordLength.pngeditdist/schema/img/eml-attribute_xsd_Element_attributeList.pngeditdist/schema/img/eml-attribute_xsd_Element_source.pngeditdist/schema/img/eml-storedProcedure_xsd_Complex_Type_ParameterType.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_cornerPoint.pngeditdist/schema/img/eml-resource_xsd_Element_language.pngeditdist/schema/img/eml-resource_xsd_Element_mediumFormat.pngeditdist/schema/img/eml-dataset_xsd_Element_view.pngeditdist/schema/img/eml-spatialRaster_xsd_Element_radiometricDataAvailability.pngeditdist/schema/img/eml-attribute_xsd_Element_dateTimePrecision.pngeditdist/schema/img/eml-coverage_xsd_Element_taxonomicSystem.pngdocs/eml-semantic-annotation-primer.md5ecf8e05ee95cf450c05035ec99b4f0ecb0dc41d1565818187000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edusection headers and text for examples 3 and 4, per Stevan. 2019-08-14 17:29:47 -04005ecf8e05ee95cf450c05035ec99b4f0ecb0dc41dsection headers and text for examples 3 and 4, per Stevan.editdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdef5e146b191f92f191c477ff23617582ab8782681565821837000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduadded an intro to grouped annotations per Stevan 2019-08-14 18:30:37 -0400ef5e146b191f92f191c477ff23617582ab878268added an intro to grouped annotations per Stevaneditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md5fd5310bd1e3ed2030ec4de1db8a1b057cb5fed01565887893000http://jenkins-ucsb-1.dataone.org/jenkins/user/stevan.earlstevan.earlstevan.earl@asu.eduediting the annotations primer 2019-08-15 12:51:33 -04005fd5310bd1e3ed2030ec4de1db8a1b057cb5fed0editing the annotations primereditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md0ecf9cca87d08a97c2e56e360011da1cc034a3be1565895267000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix spelling. 2019-08-15 11:54:27 -07000ecf9cca87d08a97c2e56e360011da1cc034a3beFix spelling.editdocs/eml-semantic-annotation-primer.mddist/search_index.jsondist/eml-ecological-metadata-language.htmldist/the-eml-module-and-resources.htmldist/images/RDF_example_b.pngdocs/eml-about-this-book.mddist/index.htmldist/release-notes.htmldist/about-this-site.htmldist/whats-new-in-eml-2-2-0.htmldist/contributors.htmldist/utility-modules.htmldist/discovery-and-interpretation-modules.htmldist/references.htmldist/internationalization-metadata-in-multiple-languages.htmldist/eml-schema.htmldist/features.htmldist/semantic-annotation-primer.htmldist/validation-and-content-references.htmldist/data-structure-modules.htmlc62f285b7d155b930ae0291fbfead0e12978f7a71565913728000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdated instructions to build and deploy the website. 2019-08-15 17:02:08 -0700c62f285b7d155b930ae0291fbfead0e12978f7a7Updated instructions to build and deploy the website.editdist/data-structure-modules.htmleditdist/discovery-and-interpretation-modules.htmleditdist/internationalization-metadata-in-multiple-languages.htmleditdocs/eml-about-this-book.mdeditdist/eml-ecological-metadata-language.htmleditdist/eml-schema.htmleditdist/release-notes.htmladddist/about-this-site.htmleditdist/validation-and-content-references.htmleditdist/references.htmleditdist/search_index.jsoneditdist/index.htmleditdist/the-eml-module-and-resources.htmleditdist/features.htmleditdist/semantic-annotation-primer.htmleditdist/whats-new-in-eml-2-2-0.htmleditdist/contributors.htmleditdist/images/RDF_example_b.pngeditdist/utility-modules.htmldocs/eml-about-this-book.mddocs/eml-about-this-site.mdbc8d995b3323b9008183b262a49b5d3b3a64fb1a1565913770000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRenamed about file. 2019-08-15 17:02:50 -0700bc8d995b3323b9008183b262a49b5d3b3a64fb1aRenamed about file.adddocs/eml-about-this-site.mddeletedocs/eml-about-this-book.mddist/search_index.jsondist/the-eml-module-and-resources.htmldist/eml-ecological-metadata-language.htmldist/index.htmldist/about-this-site.htmldist/release-notes.htmldist/whats-new-in-eml-2-2-0.htmldist/contributors.htmldist/utility-modules.htmldocs/eml-about-this-site.mddist/discovery-and-interpretation-modules.htmldist/references.htmldist/internationalization-metadata-in-multiple-languages.htmldist/eml-schema.htmldist/features.htmldist/semantic-annotation-primer.htmldist/validation-and-content-references.htmldist/data-structure-modules.html4c042faa8ffbe0c7f7b3bce72fb0acbd4c7f1c891565914107000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFixed book filename and commandline switch. 2019-08-15 17:08:27 -07004c042faa8ffbe0c7f7b3bce72fb0acbd4c7f1c89Fixed book filename and commandline switch.editdist/index.htmleditdist/internationalization-metadata-in-multiple-languages.htmleditdist/about-this-site.htmleditdist/discovery-and-interpretation-modules.htmleditdist/references.htmleditdist/utility-modules.htmleditdist/eml-schema.htmleditdist/search_index.jsoneditdocs/eml-about-this-site.mdeditdist/validation-and-content-references.htmleditdist/the-eml-module-and-resources.htmleditdist/release-notes.htmleditdist/data-structure-modules.htmleditdist/features.htmleditdist/contributors.htmleditdist/semantic-annotation-primer.htmleditdist/whats-new-in-eml-2-2-0.htmleditdist/eml-ecological-metadata-language.htmldocs/_bookdown.yml22c5b66e6f5eee9c8cadae50ddd03198d587651b1565914171000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix chapter link to file. 2019-08-15 17:09:31 -070022c5b66e6f5eee9c8cadae50ddd03198d587651bFix chapter link to file.editdocs/_bookdown.ymlsrc/test/resources/eml-sample.xml7d846bfb98843c2b5346c93e51bd129049e2eb961565975726000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded coverage section to sample with taxonId filed for validation test. 2019-08-16 10:15:26 -07007d846bfb98843c2b5346c93e51bd129049e2eb96Added coverage section to sample with taxonId filed for validation test.editsrc/test/resources/eml-sample.xmldist/search_index.jsondist/eml-ecological-metadata-language.htmldist/the-eml-module-and-resources.htmldist/index.htmldist/about-this-site.htmldist/release-notes.htmldist/whats-new-in-eml-2-2-0.htmldist/contributors.htmlREADME.mddocs/eml-contributors.mddist/utility-modules.htmldist/discovery-and-interpretation-modules.htmldist/references.htmldist/eml-schema.htmldist/internationalization-metadata-in-multiple-languages.htmldist/semantic-annotation-primer.htmldist/features.htmldist/validation-and-content-references.htmldist/data-structure-modules.html1f0713c4d50193d4cc181b765638998d2ed6f84c1566073728000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdated contributors, added ORCIDs, cleaned README links. 2019-08-17 13:28:48 -07001f0713c4d50193d4cc181b765638998d2ed6f84cUpdated contributors, added ORCIDs, cleaned README links.editdist/data-structure-modules.htmleditREADME.mdeditdist/search_index.jsoneditdist/validation-and-content-references.htmleditdist/about-this-site.htmleditdist/eml-schema.htmleditdocs/eml-contributors.mdeditdist/eml-ecological-metadata-language.htmleditdist/index.htmleditdist/release-notes.htmleditdist/whats-new-in-eml-2-2-0.htmleditdist/discovery-and-interpretation-modules.htmleditdist/internationalization-metadata-in-multiple-languages.htmleditdist/references.htmleditdist/semantic-annotation-primer.htmleditdist/contributors.htmleditdist/the-eml-module-and-resources.htmleditdist/features.htmleditdist/utility-modules.htmldist/search_index.jsondocs/eml-contributors.mddist/contributors.html2e32a3ca97f08476fa4f95a7c1b3e336ca0fe11f1566077451000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdated ORCID links. 2019-08-17 14:30:51 -07002e32a3ca97f08476fa4f95a7c1b3e336ca0fe11fUpdated ORCID links.editdist/search_index.jsoneditdocs/eml-contributors.mdeditdist/contributors.htmldist/the-eml-module-and-resources.htmldist/eml-ecological-metadata-language.htmldist/index.htmldist/release-notes.htmldist/about-this-site.htmldist/whats-new-in-eml-2-2-0.htmldocs/_output.ymldist/contributors.htmldist/utility-modules.htmldist/discovery-and-interpretation-modules.htmldist/references.htmldist/internationalization-metadata-in-multiple-languages.htmldist/features.htmldist/eml-schema.htmldist/semantic-annotation-primer.htmldist/validation-and-content-references.htmldist/data-structure-modules.html0720f11b6cf89a5174d18c1aa2110509d8316e0b1566077713000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix nav menu to remove extraneous link. 2019-08-17 14:35:13 -07000720f11b6cf89a5174d18c1aa2110509d8316e0bFix nav menu to remove extraneous link.editdist/release-notes.htmleditdist/validation-and-content-references.htmleditdist/utility-modules.htmleditdist/whats-new-in-eml-2-2-0.htmleditdocs/_output.ymleditdist/data-structure-modules.htmleditdist/internationalization-metadata-in-multiple-languages.htmleditdist/features.htmleditdist/the-eml-module-and-resources.htmleditdist/eml-schema.htmleditdist/index.htmleditdist/semantic-annotation-primer.htmleditdist/discovery-and-interpretation-modules.htmleditdist/references.htmleditdist/about-this-site.htmleditdist/contributors.htmleditdist/eml-ecological-metadata-language.htmllib/runEMLParserbuild.xmlbin/validate.shsrc/main/resources/config.xmllib/eml.jarsrc/main/java/org/ecoinformatics/eml/EMLValidator.java9f773653182756f48f754326cc99ec5dc5a822ce1566085979000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate validator to use new schema namespace. Also, fix the validator build, and add a utility shell script showing how to run the validator. 2019-08-17 16:52:59 -07009f773653182756f48f754326cc99ec5dc5a822ceUpdate validator to use new schema namespace.editsrc/main/java/org/ecoinformatics/eml/EMLValidator.javadeletelib/runEMLParsereditsrc/main/resources/config.xmleditbuild.xmladdbin/validate.sheditlib/eml.jardocs/eml-220info.md6960c4be05cda839ea5cde88a0fdef89632145f91566086063000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgEdit the EML 2.2.0 changes document. Restructured to use headings rather than Q&A. Also updated various answers, and the validation section. 2019-08-17 16:54:23 -07006960c4be05cda839ea5cde88a0fdef89632145f9Edit the EML 2.2.0 changes document.editdocs/eml-220info.mddist/search_index.jsondist/the-eml-module-and-resources.htmldist/eml-ecological-metadata-language.htmldist/index.htmldist/release-notes.htmldist/about-this-site.htmldist/whats-new-in-eml-2-2-0.htmldist/contributors.htmldist/utility-modules.htmldist/discovery-and-interpretation-modules.htmldist/references.htmldist/internationalization-metadata-in-multiple-languages.htmldist/features.htmldist/semantic-annotation-primer.htmldist/eml-schema.htmldist/validation-and-content-references.htmldist/data-structure-modules.html880f4ee0613ea1627dd70ca204de69c8fb098fc51566086238000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdated book chapter on EML 2.2.0 changes. 2019-08-17 16:57:18 -0700880f4ee0613ea1627dd70ca204de69c8fb098fc5Updated book chapter on EML 2.2.0 changes.editdist/release-notes.htmleditdist/discovery-and-interpretation-modules.htmleditdist/about-this-site.htmleditdist/internationalization-metadata-in-multiple-languages.htmleditdist/validation-and-content-references.htmleditdist/whats-new-in-eml-2-2-0.htmleditdist/data-structure-modules.htmleditdist/references.htmleditdist/index.htmleditdist/the-eml-module-and-resources.htmleditdist/eml-ecological-metadata-language.htmleditdist/features.htmleditdist/semantic-annotation-primer.htmleditdist/utility-modules.htmleditdist/search_index.jsoneditdist/contributors.htmleditdist/eml-schema.htmldocs/eml-validation-refs.mdd459e48f6913b721d16f5cfa9e756ca96fe428581566087229000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix instructions for validation script. 2019-08-17 17:13:49 -0700d459e48f6913b721d16f5cfa9e756ca96fe42858Fix instructions for validation script.editdocs/eml-validation-refs.mddist/validation-and-content-references.htmldist/search_index.jsondocs/eml-release-notes.mddist/release-notes.htmlecc1a933f5c0be3b2e4c2a6f902a58f8d123066d1566102125000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdated release notes with major features and bug listings. 2019-08-17 21:22:05 -0700ecc1a933f5c0be3b2e4c2a6f902a58f8d123066dUpdated release notes with major features and bug listings.editdocs/eml-release-notes.mdeditdist/validation-and-content-references.htmleditdist/search_index.jsoneditdist/release-notes.htmlbin/get-issues-list.sh42584d576023ef8d31c6f2007b560118a2ff0b621566104883000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd shell script for getting the current list of GitHub issues for a milestone. Useful for building the release notes. Could be formatted in the GHM format we need for the release notes, but left as an exercise for the reader. 2019-08-17 22:08:03 -070042584d576023ef8d31c6f2007b560118a2ff0b62Add shell script for getting the current list of GitHub issues for aaddbin/get-issues-list.shdist/search_index.jsondocs/eml-semantic-annotation-primer.mddist/semantic-annotation-primer.html08a30979f3062ebe887c984312a71887c11dcc351566105808000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix bullet list formatting in sem primer. 2019-08-17 22:23:28 -070008a30979f3062ebe887c984312a71887c11dcc35Fix bullet list formatting in sem primer.editdist/semantic-annotation-primer.htmleditdist/search_index.jsoneditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdfe15e5d48f412f0e9c21439b45710dcf28f4083c1566379706000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfix glossary in primer 2019-08-21 02:28:26 -0700fe15e5d48f412f0e9c21439b45710dcf28f4083cfix glossary in primereditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md9d496fa137bd9d27a956515fb2ff0f3364db9b711566416883000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduelevated the level glossary and list of vocabs. removed extra notes about subjects for later 2019-08-21 12:48:03 -07009d496fa137bd9d27a956515fb2ff0f3364db9b71elevated the level glossary and list of vocabs. removed extra noteseditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.md288785bfa6e204170536e8290a3d5ae6978f21911566427820000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edurm the toc since bookdown makes one. adapted paragrath on organization accordingly 2019-08-21 15:50:20 -0700288785bfa6e204170536e8290a3d5ae6978f2191rm the toc since bookdown makes one. adapted paragrath on organizationeditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdb96b934c442f22080cc6232fef19dc87ef47b2bb1566493639000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduorphan text, extra linefeeds removed. 2019-08-22 10:07:19 -0700b96b934c442f22080cc6232fef19dc87ef47b2bborphan text, extra linefeeds removed.editdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdfbd6da79d69116e8b53bc0f0e86a389f88cba87a1566497559000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edusmall changes to wording in appendix 2019-08-22 11:12:39 -0700fbd6da79d69116e8b53bc0f0e86a389f88cba87asmall changes to wording in appendixeditdocs/eml-semantic-annotation-primer.mddocs/eml-semantic-annotation-primer.mdf308f3660a7ed0e25c6685bf58d77fd6a1147def1566498883000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.edumoved FAQs to above appendix 2019-08-22 11:34:43 -0700f308f3660a7ed0e25c6685bf58d77fd6a1147defmoved FAQs to above appendixeditdocs/eml-semantic-annotation-primer.mdxsd/eml-attribute.xsd1f5865a3a8b5244a225eb922045d5c4c3398a8da1566502265000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduone more ISO example, per issue #311 2019-08-22 12:31:05 -07001f5865a3a8b5244a225eb922045d5c4c3398a8daone more ISO example, per issue #311editxsd/eml-attribute.xsdxsd/eml-methods.xsd913cbbb261ad30439b6e96031a68b1650e7d497c1566506158000http://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienmargaret.obrien@ucsb.eduadded methods appinfo, per issue #330 2019-08-22 13:35:58 -0700913cbbb261ad30439b6e96031a68b1650e7d497cadded methods appinfo, per issue #330editxsd/eml-methods.xsdimg/eml-methods.pngimg/eml-dataset.pngimg/eml-entity.pngimg/eml-spatialReference.pngimg/eml-physicalDistribution.pngimg/eml-semantics.pngimg/eml-coverage.pngimg/eml-resource.pngimg/eml-dataTable.pngimg/eml-protocol.pngimg/eml.pngimg/eml-software.pngimg/eml-spatialVector.pngimg/eml-otherEntity.pngimg/eml-physical.pngimg/eml-view.pngimg/eml-award.pngimg/eml-spatialRaster.pngimg/eml-attribute.pngimg/eml-project.pngimg/eml-party.pngimg/eml-literature.pngimg/eml-access.pngimg/eml-constraint.pngimg/eml-storedProcedure.pngimg/eml-text.pngcfbb742ee7266f831a0f0330aadf2692dca02a811567198676000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd new images for each module. 2019-08-30 12:57:56 -0800cfbb742ee7266f831a0f0330aadf2692dca02a81Add new images for each module.editimg/eml-spatialRaster.pngeditimg/eml-constraint.pngeditimg/eml-resource.pngdeleteimg/eml-physicalDistribution.pngeditimg/eml-storedProcedure.pngeditimg/eml-protocol.pngeditimg/eml-dataset.pngeditimg/eml-party.pngeditimg/eml-software.pngeditimg/eml-spatialReference.pngeditimg/eml-entity.pngeditimg/eml.pngeditimg/eml-project.pngeditimg/eml-spatialVector.pngdeleteimg/eml-otherEntity.pngeditimg/eml-physical.pngeditimg/eml-methods.pngeditimg/eml-dataTable.pngdeleteimg/eml-award.pngeditimg/eml-access.pngeditimg/eml-semantics.pngeditimg/eml-text.pngeditimg/eml-attribute.pngeditimg/eml-literature.pngeditimg/eml-coverage.pngeditimg/eml-view.pngdocs/eml-modules-data-structure.mddocs/eml-modules-discovery-interpret.mddocs/eml-modules-utility.mddocs/build_book.Rdocs/eml-modules-resources.md1b163e7a619000cb4002bf8c4f32350047f0634b1567208598000http://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishpetridish@gmail.comLink to module images and diagrams in docs Addresses #316 2019-08-30 15:43:18 -08001b163e7a619000cb4002bf8c4f32350047f0634bLink to module images and diagrams in docseditdocs/eml-modules-data-structure.mdeditdocs/eml-modules-discovery-interpret.mdeditdocs/eml-modules-utility.mdeditdocs/build_book.Reditdocs/eml-modules-resources.mdREADME.md9a2a0e17f530e7dc1b5c772b5cdae696ef62f0db1567210024000http://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishpetridish@gmail.comLink to interactive schema documentation in readme 2019-08-30 16:07:04 -08009a2a0e17f530e7dc1b5c772b5cdae696ef62f0dbLink to interactive schema documentation in readmeeditREADME.mddocs/_bookdown.ymldocs/eml-modules-data-structure.mddocs/eml-modules-discovery-interpret.mddocs/eml-modules-utility.mddocs/eml-schema.mddocs/eml-modules-resources.mddocs/build_book.R977144775c0c6b19923d27f765503c209157177a1567210843000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRearrange chapters to have all modules in one chapter. Also, fix the links to the overall schema interactive docs, and suppress warnings on the builds. Images and schemas are now fully complete. 2019-08-30 16:20:43 -0800977144775c0c6b19923d27f765503c209157177aRearrange chapters to have all modules in one chapter.editdocs/eml-modules-discovery-interpret.mdeditdocs/eml-modules-resources.mdeditdocs/build_book.Reditdocs/eml-schema.mdeditdocs/eml-modules-utility.mdeditdocs/_bookdown.ymleditdocs/eml-modules-data-structure.mddocs/schema/img/eml-coverage_xsd_Element_endDate.pngdist/schema/img/eml-coverage_xsd_Complex_Type_TaxonomicCoverage.pngdocs/schema/img/eml-attribute_xsd_Element_dateTime.pngdist/schema/img/eml-attribute_xsd_Element_accuracy.pngdist/schema/img/eml-attribute_xsd_Element_codesetURL.pngdist/schema/img/eml-attribute_xsd_Element_source.pngdist/schema/img/eml-resource_xsd_Element_licensed.pngdocs/schema/img/eml-party_xsd_Element_city.pngdist/schema/img/eml-literature_xsd_Element_manuscript.pngdist/schema/img/eml-spatialRaster_xsd_Element_triangulationIndicator.pngdist/schema/img/eml-dataTable_xsd_Element_attributeList.pngdist/schema/img/eml-storedProcedure_xsd_Element_repeats.pngdist/schema/index.indexList.htmldocs/schema/img/eml-spatialReference_xsd_Complex_Type_SpatialReferenceType.pngdocs/schema/img/eml-software_xsd_Element_distribution.pngdist/schema/img/eml-party_xsd_Complex_Type_Address.pngdist/schema/img/eml-spatialRaster_xsd_Element_cloudCoverPercentage.pngdist/schema/img/eml-protocol_xsd_Complex_Type_ProtocolType.pngdist/schema/img/eml-physical_xsd_Element_numPhysicalLinesPerRecord.pngdocs/schema/img/cTR.gifdocs/schema/img/eml-attribute_xsd_Element_maximum_1.pngdist/schema/img/eml-resource_xsd_Element_intellectualRights.pngdist/schema/img/eml-resource_xsd_Element_identifier.pngdocs/schema/img/eml-literature_xsd_Element_thesis.pngdist/schema/img/eml-coverage_xsd_Element_classificationSystemModifications.pngdist/schema/img/eml-physical_xsd_Element_objectName.pngdocs/schema/img/eml-coverage_xsd_Complex_Type_GeographicCoverage.pngdist/schema/img/eml-attribute_xsd_Element_citation.pngdist/schema/eml-dataset_xsd.htmldist/schema/img/eml-spatialRaster_xsd_Element_compressionGenerationQuality.pngdocs/schema/img/eml-spatialRaster_xsd_Element_waveLengthUnits.pngdocs/schema/img/eml-coverage_xsd_Element_southBoundingCoordinate.pngdocs/schema/img/eml-spatialRaster_xsd_Element_toneGradation.pngdist/schema/img/eml-literature_xsd_Element_volume_1.pngdist/schema/img/eml-resource_xsd_Element_keywordSet.pngdist/schema/img/eml-methods_xsd_Complex_Type_MethodsType.pngdist/schema/img/eml-entity_xsd_Element_entityType.pngdocs/schema/img/eml-constraint_xsd_Element_entityReference.pngdist/schema/img/eml-physical_xsd_Element_literalCharacter_1.pngdist/schema/img/eml-party_xsd_Element_administrativeArea.pngdist/schema/img/eml-literature_xsd_Element_numberOfVolumes_1.pngdocs/schema/img/eml-coverage_xsd_Element_northBoundingCoordinate.pngdocs/schema/img/eml-constraint_xsd_Complex_Type_ConstraintType.pngdist/schema/index.indexListns.htmldist/schema/img/eml-literature_xsd_Element_publicationPlace_1.pngdist/schema/img/eml-attribute_xsd_Element_standardUnit.pngdocs/schema/img/lR.gifdocs/schema/img/eml-protocol_xsd_Element_protocol.pngdist/schema/img/eml-dataset_xsd_Element_literatureCited.pngdist/schema/eml-project_xsd.htmldist/schema/img/eml-project_xsd_Element_personnel.pngdist/schema/img/eml-entity_xsd_Element_physical.pngdist/schema/img/eml-party_xsd_Element_electronicMailAddress.pngdist/schema/img/eml-coverage_xsd_Simple_Type_GRingType.pngdist/schema/img/eml-attribute_xsd_Element_attributeAccuracyExplanation.pngdocs/schema/img/eml-spatialVector_xsd_Element_quantitativeAccuracyValue.pngdocs/schema/img/eml-entity_xsd_Element_methods.pngdocs/schema/img/eml-spatialRaster_xsd_Element_pointInPixel_1.pngdist/schema/img/eml-resource_xsd_Element_mediumVolume.pngdocs/schema/eml-documentation_xsd.htmldist/schema/img/eml-dataset_xsd_Simple_Type_MaintUpFreqType.pngdist/schema/img/eml-resource_xsd_Element_inline.pngdocs/schema/img/eml-coverage_xsd_Element_temporalCoverage.pngdocs/schema/img/eml-literature_xsd_Element_generic.pngdist/schema/img/eml-spatialRaster_xsd_Element_controlPoint.pngdist/schema/img/eml-entity_xsd_Element_Group_EntityGroup.pngdist/schema/img/eml-spatialReference_xsd_Element_projection.pngdocs/schema/img/eml-text_xsd_Element_superscript_1.pngdocs/schema/img/eml-dataset_xsd_Element_introduction.pngdocs/schema/img/eml-software_xsd_Element_LanguageValue.pngdocs/schema/img/eml-spatialRaster_xsd_Element_spatialRaster.pngdocs/schema/img/eml-spatialVector_xsd_Complex_Type_DataQuality.pngdocs/schema/img/eml-text_xsd_Element_orderedlist_1.pngdist/schema/img/eml-physical_xsd_Element_onlineDescription.pngdist/schema/img/eml-attribute_xsd_Element_enumeratedDomain.pngdist/schema/img/eml-software_xsd_Element_runtimeMemoryUsage.pngbin/build_schema_documentation.shdocs/schema/img/eml-coverage_xsd_Element_originator.pngdocs/schema/img/eml-spatialRaster_xsd_Complex_Type_BandType.pngdist/schema/img/eml-spatialReference_xsd_Element_depthDatumName.pngdocs/schema/img/eml-coverage_xsd_Element_timeScaleName.pngdist/schema/img/eml-attribute_xsd_Complex_Type_AttributeListType.pngdocs/schema/img/eml-dataset_xsd_Element_acknowledgements.png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schema docs out of dist/schema and into docs/schema 2019-08-30 17:10:13 -0800088be76b638cb067c8589afccd031ea2230dc3aaMove schema docs out of dist/schema and into 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timeScaleAgeEstimate.pngdeletedist/schema/img/eml-spatialRaster_xsd_Element_bandDescription.pngadddocs/schema/index.indexList.htmladddocs/schema/img/eml-coverage_xsd_Element_gRing.pngdeletedist/schema/img/HierarchyArrow12.jpgdeletedist/schema/img/eml-literature_xsd_Element_chapter.pngadddocs/schema/img/eml-literature_xsd_Element_numberOfVolumes.pngadddocs/schema/img/eml-attribute_xsd_Element_storageType.pngdocs/schema/img/eml-methods_xsd_Element_methods.pngdocs/schema/img/eml-dataset_xsd_Element_methods.pngdocs/schema/img/eml-attribute_xsd_Element_methods.pngdocs/schema/img/eml-entity_xsd_Element_methods.pngdocs/schema/eml-attribute_xsd.htmldocs/schema/img/eml-methods_xsd_Complex_Type_MethodsType.pngdocs/schema/eml-methods_xsd.htmldocs/schema/img/eml-methods_xsd_Element_methodStep.png05e9f5ee4b4651fa0fd2d8345f1c0f190d1909361567213901000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd newly generated schema images to built schema docs. 2019-08-30 17:11:41 -080005e9f5ee4b4651fa0fd2d8345f1c0f190d190936Add newly generated schema images to built schema docs.editdocs/schema/img/eml-dataset_xsd_Element_methods.pngeditdocs/schema/img/eml-methods_xsd_Element_methods.pngeditdocs/schema/img/eml-entity_xsd_Element_methods.pngeditdocs/schema/img/eml-methods_xsd_Element_methodStep.pngeditdocs/schema/eml-methods_xsd.htmleditdocs/schema/img/eml-methods_xsd_Complex_Type_MethodsType.pngeditdocs/schema/eml-attribute_xsd.htmleditdocs/schema/img/eml-attribute_xsd_Element_methods.pngdocs/build_book.Ra8796065ec454581f669b4834c52f41f363309e31567214192000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgCopy source dirs into built book for proper linking. 2019-08-30 17:16:32 -0800a8796065ec454581f669b4834c52f41f363309e3Copy source dirs into built book for proper linking.editdocs/build_book.Rdist/the-eml-module-and-resources.htmldist/libs/gitbook-2.6.7/js/plugin-sharing.jsdist/images/RDF_example_b.pngdist/index.htmldist/libs/gitbook-2.6.7/js/jquery.highlight.jsdist/about-this-site.htmldist/whats-new-in-eml-2-2-0.htmldist/libs/gitbook-2.6.7/js/plugin-search.jsdist/libs/jquery-2.2.3/jquery.min.jsdist/libs/gitbook-2.6.7/css/plugin-fontsettings.cssdist/references.htmldist/libs/gitbook-2.6.7/js/plugin-fontsettings.jsdist/eml-schema.htmldist/libs/gitbook-2.6.7/css/plugin-search.cssdist/search_index.jsondist/eml-ecological-metadata-language.htmldist/libs/gitbook-2.6.7/css/style.cssdist/libs/gitbook-2.6.7/css/plugin-bookdown.cssdist/libs/gitbook-2.6.7/css/fontawesome/fontawesome-webfont.ttfdist/release-notes.htmldist/libs/gitbook-2.6.7/css/plugin-table.cssdist/contributors.htmldist/libs/gitbook-2.6.7/css/plugin-highlight.cssdist/about-this-book.htmldist/libs/gitbook-2.6.7/js/plugin-bookdown.jsdist/images/RDF_example_a.pngdist/utility-modules.htmldist/discovery-and-interpretation-modules.htmldist/features.htmldist/internationalization-metadata-in-multiple-languages.htmldist/semantic-annotation-primer.htmldist/validation-and-content-references.htmldist/libs/gitbook-2.6.7/js/app.min.jsdist/libs/gitbook-2.6.7/js/lunr.jsdist/data-structure-modules.html0c99ccd5a04892accb9efca93c3288aba3cbba631567214335000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgDelete the contents of dist as this will now be a temporary staging area. 2019-08-30 17:18:55 -08000c99ccd5a04892accb9efca93c3288aba3cbba63Delete the contents of dist as this will now be a temporary stagingdeletedist/libs/gitbook-2.6.7/css/style.cssdeletedist/libs/gitbook-2.6.7/css/fontawesome/fontawesome-webfont.ttfdeletedist/libs/jquery-2.2.3/jquery.min.jsdeletedist/libs/gitbook-2.6.7/js/plugin-bookdown.jsdeletedist/the-eml-module-and-resources.htmldeletedist/images/RDF_example_a.pngdeletedist/libs/gitbook-2.6.7/js/app.min.jsdeletedist/release-notes.htmldeletedist/search_index.jsondeletedist/eml-schema.htmldeletedist/features.htmldeletedist/internationalization-metadata-in-multiple-languages.htmldeletedist/about-this-site.htmldeletedist/libs/gitbook-2.6.7/css/plugin-bookdown.cssdeletedist/libs/gitbook-2.6.7/css/plugin-fontsettings.cssdeletedist/validation-and-content-references.htmldeletedist/discovery-and-interpretation-modules.htmldeletedist/libs/gitbook-2.6.7/js/lunr.jsdeletedist/libs/gitbook-2.6.7/js/plugin-fontsettings.jsdeletedist/about-this-book.htmldeletedist/libs/gitbook-2.6.7/css/plugin-search.cssdeletedist/references.htmldeletedist/libs/gitbook-2.6.7/css/plugin-table.cssdeletedist/libs/gitbook-2.6.7/js/jquery.highlight.jsdeletedist/semantic-annotation-primer.htmldeletedist/whats-new-in-eml-2-2-0.htmldeletedist/eml-ecological-metadata-language.htmldeletedist/libs/gitbook-2.6.7/js/plugin-sharing.jsdeletedist/contributors.htmldeletedist/libs/gitbook-2.6.7/js/plugin-search.jsdeletedist/images/RDF_example_b.pngdeletedist/data-structure-modules.htmldeletedist/utility-modules.htmldeletedist/index.htmldeletedist/libs/gitbook-2.6.7/css/plugin-highlight.cssdocs/eml-about-this-site.md2164796698deecc83939e41dbcceefc574a0a98c1567216954000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate site build description. 2019-08-30 18:02:34 -08002164796698deecc83939e41dbcceefc574a0a98cUpdate site build description.editdocs/eml-about-this-site.mdbin/deploy_site.shee2567e31fc6a4ec6cb7552423df896a5146eff11567217045000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate the deploy script. THe script now builds the distribution site from scratch by running the build_book.R script, and then copies source files like images and schema docs and xsd files into the dist directory. The dist directory is then added to a temporary branch, and pushed to gh_pages to be picked up by Netlify. The temporary branch is then deleted, and we switch back to the branch from which the original docs were built. 2019-08-30 18:04:05 -0800ee2567e31fc6a4ec6cb7552423df896a5146eff1Update the deploy script.editbin/deploy_site.shbin/deploy_site.sha7b126b7db90fd7c072551dc5a2d78976131f9691567217296000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRemove unneeded status outputs from deploy script. 2019-08-30 18:08:16 -0800a7b126b7db90fd7c072551dc5a2d78976131f969Remove unneeded status outputs from deploy script.editbin/deploy_site.shdocs/_redirectsdocs/build_book.R243b0f1115b83a42d5e17e7947382841e30a41c01567552733000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd redirect config file for Netlify. This enables the bare EML namespace to redirect to the eml.xsd file. 2019-09-03 15:18:53 -0800243b0f1115b83a42d5e17e7947382841e30a41c0Add redirect config file for Netlify.editdocs/build_book.Radddocs/_redirectsdocs/_redirects59e638a56baabe208b4543bf4cb22517813639e11567553486000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgRewrite the URL rather than redirect. 2019-09-03 15:31:26 -080059e638a56baabe208b4543bf4cb22517813639e1Rewrite the URL rather than redirect.editdocs/_redirectslib/eml.jarbuild.xml1694a4edb8072676dd05bc33bb4f75855e772a541567558614000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgStreamline git clone and build for EML parser. 2019-09-03 16:56:54 -08001694a4edb8072676dd05bc33bb4f75855e772a54Streamline git clone and build for EML parser.editlib/eml.jareditbuild.xml.gitignorea310e7fdda11667f977b5fa5ddd41b34bc8d3ae51567558673000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgIgnore the release dir in commits. 2019-09-03 16:57:53 -0800a310e7fdda11667f977b5fa5ddd41b34bc8d3ae5Ignore the release dir in commits.edit.gitignorebuild.xmlffbeb1e6e71d13ebd7eb2a79204e152a4b924b0f1567560098000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFUrther streamline git copy for EML schemas. 2019-09-03 17:21:38 -0800ffbeb1e6e71d13ebd7eb2a79204e152a4b924b0fFUrther streamline git copy for EML schemas.editbuild.xmlsrc/main/resources/config.xmllib/eml.jarbuild.xmld5756571958010a1fa5aa16db71df5a088d343d21567564172000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix emlparser servlet by adding utilities.jar. Now the servlet runs again and parses 2.2.0 and 2.1.1 docs properly. 2019-09-03 18:29:32 -0800d5756571958010a1fa5aa16db71df5a088d343d2Fix emlparser servlet by adding utilities.jar.editsrc/main/resources/config.xmleditbuild.xmleditlib/eml.jarbuild.xml66a42fc5370c2af5f61697328d109251ab8f34d21567565516000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFix the `dist` target to create the release files for distribution. 2019-09-03 18:51:56 -080066a42fc5370c2af5f61697328d109251ab8f34d2Fix the `dist` target to create the release files for distribution.editbuild.xmldocs/eml-modules-data-structure.mded2d5319e88ad813daa341cdea2ea6041fa1019f1567566848000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdded paragraph descrining need for missing value codes and code definitions for enumerated domains. 2019-09-03 19:14:08 -0800ed2d5319e88ad813daa341cdea2ea6041fa1019fAdded paragraph descrining need for missing value codes and codeeditdocs/eml-modules-data-structure.mddocs/eml-modules-utility.mddocs/eml-modules-discovery-interpret.md24301e3b94c29c2152d81553e5d6153d746299491567567869000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgDeprecated the eml-access module in the docs. 2019-09-03 19:31:09 -080024301e3b94c29c2152d81553e5d6153d74629949Deprecated the eml-access module in the docs.editdocs/eml-modules-utility.mdeditdocs/eml-modules-discovery-interpret.mddocs/eml-contributors.mdREADME.md15999974c18702dcdd2c64c60872702959539d801567574079000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdated language around contribution by maintainers. Removed language about the ecoinformatics charter. 2019-09-03 21:14:39 -080015999974c18702dcdd2c64c60872702959539d80Updated language around contribution by maintainers.editdocs/eml-contributors.mdeditREADME.mddocs/codemeta.jsondocs/style.cssdocs/_output.ymldocs/javascript.htmlREADME.md5f3fccd9e09e96838f9fb3618aef3096b2c15ef21567645677000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd a codemeta.json file and a bibtext citation. The codemeta.json file is included in the HTML of the generated book, and the Bobtex entry is made available through a 'Copy Bibtex' button. 2019-09-04 17:07:57 -08005f3fccd9e09e96838f9fb3618aef3096b2c15ef2Add a codemeta.json file and a bibtext citation.adddocs/codemeta.jsonadddocs/style.csseditREADME.mdadddocs/javascript.htmleditdocs/_output.ymldocs/codemeta.jsonb21f3f465d4bd6774eed8393c52ee09ab0ac364b1567652652000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate context file to use codemeta as default. Plus, define datacite vocabulary. 2019-09-04 19:04:12 -0800b21f3f465d4bd6774eed8393c52ee09ab0ac364bUpdate context file to use codemeta as default.editdocs/codemeta.jsondocs/eml-semantic-annotation-primer.mdf1b54eadda9272be78a53cbdb2c01a273d82ec541567653861000http://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplynoreply@github.comfixed minor typos 2019-09-04 20:24:21 -0700f1b54eadda9272be78a53cbdb2c01a273d82ec54fixed minor typoseditdocs/eml-semantic-annotation-primer.mddocs/eml-220info.md0d7b106c15ae74dc092780a7095b5a78cd82b9361567701357000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgFixed typos, added section on deprecating EML access. 2019-09-05 08:35:57 -08000d7b106c15ae74dc092780a7095b5a78cd82b936Fixed typos, added section on deprecating EML access.editdocs/eml-220info.mddocs/eml-release-notes.mdREADME.md3a9ae6d1de72d052169d2e75bff9587efe7eac111567708413000http://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishpetridish@gmail.comMake some minor copy edits - Borderline overly-pedantic change from Bibtex to BibTeX - Change HTTP links to HTTPS where appropriate 2019-09-05 10:33:33 -08003a9ae6d1de72d052169d2e75bff9587efe7eac11Make some minor copy editseditREADME.mdeditdocs/eml-release-notes.mdpom.xml3840f49337b1c76c2701dd5fc7b2e3fc0f906a051567727232000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduRemove the ant target call "docs" since the build.xml doesn't have it any more. 2019-09-05 16:47:12 -07003840f49337b1c76c2701dd5fc7b2e3fc0f906a05Remove the ant target call "docs" since the build.xml doesn't have iteditpom.xmlsrc/main/java/org/ecoinformatics/datamanager/parser/DataPackage.java243ca3026cf05014661201f2fa72091596e0188e1567727476000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduRemove the duplicated methods set/getAbstract. 2019-09-05 16:51:16 -0700243ca3026cf05014661201f2fa72091596e0188eRemove the duplicated methods set/getAbstract.editsrc/main/java/org/ecoinformatics/datamanager/parser/DataPackage.javapom.xml58b4a091539b6f3aa56fce4dee9dd125a032f1ed1567727594000http://jenkins-ucsb-1.dataone.org/jenkins/user/taotaotao@nceas.ucsb.eduBump the version of the datamanager jar file from 0.9.2 to 1.0.0. 2019-09-05 16:53:14 -070058b4a091539b6f3aa56fce4dee9dd125a032f1edBump the version of the datamanager jar file from 0.9.2 to 1.0.0.editpom.xmldocs/eml-220info.mddocs/eml-modules-utility.mdb35ef1780e97c83dfdc288dbc77de9c7b6800afe1568311839000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgNew language for deprecation of access element. Includes statement that access is considered advisory only. 2019-09-12 10:10:39 -0800b35ef1780e97c83dfdc288dbc77de9c7b6800afeNew language for deprecation of access element.editdocs/eml-modules-utility.mdeditdocs/eml-220info.mddocs/eml-modules-utility.mdeaf6a6e71b44b254e7e1cff561548d6a2695dc8a1568315393000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgAdd more markdown documentation. 2019-09-12 11:09:53 -0800eaf6a6e71b44b254e7e1cff561548d6a2695dc8aAdd more markdown documentation.editdocs/eml-modules-utility.mdbuild.xml233427f03610694d2a865e6748bcf8bfb51be9001568331227000http://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodegitcode@magisa.orgUpdate release target to include generated site. 2019-09-12 15:33:47 -0800233427f03610694d2a865e6748bcf8bfb51be900Update release target to include generated site.editbuild.xmlgithttp://jenkins-ucsb-1.dataone.org/jenkins/user/gitcodegitcodehttp://jenkins-ucsb-1.dataone.org/jenkins/user/leinfelderleinfelderhttp://jenkins-ucsb-1.dataone.org/jenkins/user/margaret.obrienmargaret.obrienhttp://jenkins-ucsb-1.dataone.org/jenkins/user/mmaiermmaierhttp://jenkins-ucsb-1.dataone.org/jenkins/user/mobmobhttp://jenkins-ucsb-1.dataone.org/jenkins/user/noreplynoreplyhttp://jenkins-ucsb-1.dataone.org/jenkins/user/petridishpetridishhttp://jenkins-ucsb-1.dataone.org/jenkins/user/ssfchongssfchonghttp://jenkins-ucsb-1.dataone.org/jenkins/user/stevan.earlstevan.earlhttp://jenkins-ucsb-1.dataone.org/jenkins/user/taotao